BLASTX nr result
ID: Coptis23_contig00001399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001399
(2454 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514972.1| Signal recognition particle subunit srp72, p... 705 0.0
emb|CBI27541.3| unnamed protein product [Vitis vinifera] 695 0.0
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD... 695 0.0
ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kD... 675 0.0
ref|XP_003531178.1| PREDICTED: signal recognition particle 72 kD... 670 0.0
>ref|XP_002514972.1| Signal recognition particle subunit srp72, putative [Ricinus
communis] gi|223546023|gb|EEF47526.1| Signal recognition
particle subunit srp72, putative [Ricinus communis]
Length = 664
Score = 705 bits (1820), Expect = 0.0
Identities = 373/596 (62%), Positives = 453/596 (76%)
Frame = -1
Query: 2232 NRHIQRSDFEQAVKVSDQVLGIIPGDVDALRCKIVGLIKVDDYDKALSTIQNLPSTLNHF 2053
N+HIQRSD+EQAVKV+DQVL + PGD DA+RCK+VG+IK D+ D ALSTI + F
Sbjct: 30 NKHIQRSDYEQAVKVADQVLAVAPGDEDAIRCKVVGMIKADNIDDALSTIHSAQRLTVDF 89
Query: 2052 NFYKAYCLYRQNKLDEALECMQSQEQTSATMLLETQVLYRLGRMDACMDVYQRLRSFKIV 1873
+F+KAYCLYRQNKL+EALE ++ QE+ S T+LLE+Q+LYRLG+MDAC+DVYQ+L+ KI
Sbjct: 90 SFFKAYCLYRQNKLEEALETLRGQERNSETLLLESQILYRLGKMDACVDVYQKLQKSKID 149
Query: 1872 SLEVNIVACLVSAGRASEVQGMMDSLKVKADRSFELGYNTACSLVQQTKYTEAKTLLLTS 1693
SLE+N VA L+ AGRASEVQGMM++ ++KA SFEL YNTACSL+Q+ KYT+A+ LLLT+
Sbjct: 150 SLEINFVASLILAGRASEVQGMMEANRIKASSSFELAYNTACSLIQRNKYTDAEQLLLTA 209
Query: 1692 QRNGKEALMXXXXXXXXXXXXXIPVSVQLAYVEQLLGHPKEAMDAYLDIINKNLADDASL 1513
+R G+E LM P++VQLAYV++LLG +EAM AY DIIN+NLAD++S
Sbjct: 210 RRIGQETLMDDNLAEDDIEIELAPIAVQLAYVQELLGRSQEAMGAYTDIINRNLADESSF 269
Query: 1512 AVAINNFIALRGSKDASDGLRKIDRLLEKADLADGVHFARGLDFKLFSKQKEAIYSNRVL 1333
AVA+NN +AL+G+KD SD LRK+DRL +K A G ARGL+ KL KQ+E IY+NRVL
Sbjct: 270 AVAVNNLVALKGTKDVSDNLRKLDRLKDKD--AQGFQLARGLE-KLSVKQRETIYANRVL 326
Query: 1332 LLLLANKIDQARELVAALLNMFPGSVITVVLQAAVLVRENKAGRAEEILGVFADKYPEKS 1153
LLL ANK+DQARE+VAAL MF SV+ V+LQ+AVLVRENKA RAEEIL FA+K P+KS
Sbjct: 327 LLLHANKMDQAREIVAALPYMFADSVVPVLLQSAVLVRENKASRAEEILAQFAEKLPDKS 386
Query: 1152 KVXXXXXXXXXXXAGHLQIAVDSLLRIPEIQHMPATVATIVTLRERVGDIDGAAAVFDTA 973
K+ AGH Q+A DSL +I +IQH PATVATIV L+ER GDIDGA+AV D+A
Sbjct: 387 KIILLARAQIAAAAGHPQVAADSLSKITDIQHKPATVATIVALKERAGDIDGASAVLDSA 446
Query: 972 IQWWSNAMAEDSKLHVIMHKAASFKLKHGREEEAVKLYEALVRSEGSVEALVGLVTTAAS 793
I+WWSNAMAED+KL VIM +AASFK++HGREEEA LYE LV+S GS+EAL GLV+T A+
Sbjct: 447 IKWWSNAMAEDNKLDVIMQQAASFKIRHGREEEAAHLYEQLVKSHGSIEALAGLVSTVAN 506
Query: 792 VDVEKAETYEMQLKPLPGLKGVDVDSLEKTSGAKYTEDGGHVRNVEVYEGQVXXXXXXXX 613
V+V+KAE YE QLKPLPGLKG+DVDSLEKTSGAK+ E G HV EV+E
Sbjct: 507 VNVDKAEAYEKQLKPLPGLKGIDVDSLEKTSGAKHVE-GSHVSVAEVHEEGKKEKPKKKR 565
Query: 612 XXXXXXXXXXXXXXXXXXXXPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVGREK 445
PERWLPKRERSSYRPKRKDKRAAQVRGSQGAV REK
Sbjct: 566 KRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREK 621
>emb|CBI27541.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 695 bits (1793), Expect = 0.0
Identities = 368/597 (61%), Positives = 453/597 (75%), Gaps = 1/597 (0%)
Frame = -1
Query: 2232 NRHIQRSDFEQAVKVSDQVLGIIPGDVDALRCKIVGLIKVDDYDKALSTIQNLPSTLNHF 2053
N HIQRS F+QAVKV+DQ+L + P D DA+RCK+V LIK D + ALSTIQ
Sbjct: 29 NLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQRLPIDL 88
Query: 2052 NFYKAYCLYRQNKLDEALECMQSQEQTSATMLLETQVLYRLGRMDACMDVYQRLRSFKIV 1873
+F+KAYCLYRQNKLDE+LE ++SQE +S MLLE+Q+LYRLG+MDAC+D+YQ+L+ KI
Sbjct: 89 SFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKLQKSKIE 148
Query: 1872 SLEVNIVACLVSAGRASEVQGMMDSLKVKADRSFELGYNTACSLVQQTKYTEAKTLLLTS 1693
SLE+N+VA LVSAGR S+VQG +D+L+VKA SFEL YNTACSL++++KY +A+ LLL++
Sbjct: 149 SLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERSKYKDAEQLLLSA 208
Query: 1692 QRNGKEALMXXXXXXXXXXXXXIPVSVQLAYVEQLLGHPKEAMDAYLDIINKNLADDASL 1513
+R G+E LM P++VQLAYV+QLLG+ EAM+AY IIN+NLAD++SL
Sbjct: 209 RRVGQETLMEDNLADDEIEIELAPLAVQLAYVQQLLGNTPEAMEAYTGIINRNLADESSL 268
Query: 1512 AVAINNFIALRGSKDASDGLRKIDRLLEKADLADGVHFARGLDFKLFSKQKEAIYSNRVL 1333
AVA+NN +AL+G KD SD LRK+DRL+EK + A + GL+ KL KQ+E IY+NRVL
Sbjct: 269 AVAVNNLVALKGPKDISDSLRKLDRLMEKGNGAQSFQLSNGLESKLSPKQRETIYTNRVL 328
Query: 1332 LLLLANKIDQARELVAALLNMFPGSVITVVLQAAVLVRENKAGRAEEILGVFADKYPEKS 1153
LLL AN++DQARELVAAL +MF SV+ V+LQAAVLVRENK+G+AEEILG FA+K+P+K+
Sbjct: 329 LLLHANRMDQARELVAALPDMFADSVMPVLLQAAVLVRENKSGKAEEILGQFAEKFPDKA 388
Query: 1152 KVXXXXXXXXXXXAGHLQIAVDSLLRIPEIQHMPATVATIVTLRERVGDIDGAAAVFDTA 973
KV AGH QIA +SL +I +IQH+PATVATIV+L+ER GDIDGA AVFD+A
Sbjct: 389 KVVLLARAQIAAVAGHPQIAAESLSKIADIQHLPATVATIVSLKERAGDIDGAEAVFDSA 448
Query: 972 IQWWSNAMAEDSKLHVIMHKAASFKLKHGREEEAVKLYEALVRSEGSVEALVGLVTTAAS 793
IQWWSNAM ED+KL VIM +AASFKLKHGRE+EA +LYE LV+S GSV+AL+GLVTTAA
Sbjct: 449 IQWWSNAMTEDNKLTVIMQEAASFKLKHGREKEAARLYEELVKSHGSVQALIGLVTTAAR 508
Query: 792 VDVEKAETYEMQLKPLPGLKGVDVDSLEKTSGAKYTEDGGHVRNVEVYE-GQVXXXXXXX 616
VDV+KAE YE QLKPLPGLKGVDV+SLE+TSGAK+ + V E YE +
Sbjct: 509 VDVDKAEAYEKQLKPLPGLKGVDVESLERTSGAKHIQSDSRVGITEAYEESKNKEKAKKK 568
Query: 615 XXXXXXXXXXXXXXXXXXXXXPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVGREK 445
PERWLPKRERSSYRPKRKDKRAAQVRGSQGAV REK
Sbjct: 569 RKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREK 625
>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
vinifera]
Length = 673
Score = 695 bits (1793), Expect = 0.0
Identities = 368/597 (61%), Positives = 453/597 (75%), Gaps = 1/597 (0%)
Frame = -1
Query: 2232 NRHIQRSDFEQAVKVSDQVLGIIPGDVDALRCKIVGLIKVDDYDKALSTIQNLPSTLNHF 2053
N HIQRS F+QAVKV+DQ+L + P D DA+RCK+V LIK D + ALSTIQ
Sbjct: 29 NLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQRLPIDL 88
Query: 2052 NFYKAYCLYRQNKLDEALECMQSQEQTSATMLLETQVLYRLGRMDACMDVYQRLRSFKIV 1873
+F+KAYCLYRQNKLDE+LE ++SQE +S MLLE+Q+LYRLG+MDAC+D+YQ+L+ KI
Sbjct: 89 SFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKLQKSKIE 148
Query: 1872 SLEVNIVACLVSAGRASEVQGMMDSLKVKADRSFELGYNTACSLVQQTKYTEAKTLLLTS 1693
SLE+N+VA LVSAGR S+VQG +D+L+VKA SFEL YNTACSL++++KY +A+ LLL++
Sbjct: 149 SLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERSKYKDAEQLLLSA 208
Query: 1692 QRNGKEALMXXXXXXXXXXXXXIPVSVQLAYVEQLLGHPKEAMDAYLDIINKNLADDASL 1513
+R G+E LM P++VQLAYV+QLLG+ EAM+AY IIN+NLAD++SL
Sbjct: 209 RRVGQETLMEDNLADDEIEIELAPLAVQLAYVQQLLGNTPEAMEAYTGIINRNLADESSL 268
Query: 1512 AVAINNFIALRGSKDASDGLRKIDRLLEKADLADGVHFARGLDFKLFSKQKEAIYSNRVL 1333
AVA+NN +AL+G KD SD LRK+DRL+EK + A + GL+ KL KQ+E IY+NRVL
Sbjct: 269 AVAVNNLVALKGPKDISDSLRKLDRLMEKGNGAQSFQLSNGLESKLSPKQRETIYTNRVL 328
Query: 1332 LLLLANKIDQARELVAALLNMFPGSVITVVLQAAVLVRENKAGRAEEILGVFADKYPEKS 1153
LLL AN++DQARELVAAL +MF SV+ V+LQAAVLVRENK+G+AEEILG FA+K+P+K+
Sbjct: 329 LLLHANRMDQARELVAALPDMFADSVMPVLLQAAVLVRENKSGKAEEILGQFAEKFPDKA 388
Query: 1152 KVXXXXXXXXXXXAGHLQIAVDSLLRIPEIQHMPATVATIVTLRERVGDIDGAAAVFDTA 973
KV AGH QIA +SL +I +IQH+PATVATIV+L+ER GDIDGA AVFD+A
Sbjct: 389 KVVLLARAQIAAVAGHPQIAAESLSKIADIQHLPATVATIVSLKERAGDIDGAEAVFDSA 448
Query: 972 IQWWSNAMAEDSKLHVIMHKAASFKLKHGREEEAVKLYEALVRSEGSVEALVGLVTTAAS 793
IQWWSNAM ED+KL VIM +AASFKLKHGRE+EA +LYE LV+S GSV+AL+GLVTTAA
Sbjct: 449 IQWWSNAMTEDNKLTVIMQEAASFKLKHGREKEAARLYEELVKSHGSVQALIGLVTTAAR 508
Query: 792 VDVEKAETYEMQLKPLPGLKGVDVDSLEKTSGAKYTEDGGHVRNVEVYE-GQVXXXXXXX 616
VDV+KAE YE QLKPLPGLKGVDV+SLE+TSGAK+ + V E YE +
Sbjct: 509 VDVDKAEAYEKQLKPLPGLKGVDVESLERTSGAKHIQSDSRVGITEAYEESKNKEKAKKK 568
Query: 615 XXXXXXXXXXXXXXXXXXXXXPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVGREK 445
PERWLPKRERSSYRPKRKDKRAAQVRGSQGAV REK
Sbjct: 569 RKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREK 625
>ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cucumis
sativus] gi|449530207|ref|XP_004172087.1| PREDICTED:
signal recognition particle 72 kDa protein-like [Cucumis
sativus]
Length = 667
Score = 675 bits (1742), Expect = 0.0
Identities = 357/597 (59%), Positives = 443/597 (74%), Gaps = 1/597 (0%)
Frame = -1
Query: 2232 NRHIQRSDFEQAVKVSDQVLGIIPGDVDALRCKIVGLIKVDDYDKALSTIQNLPSTLNHF 2053
NRHIQRS+F QAVKV+DQ+L + PGD DALRCKIV LIK D D ALS IQ+ S F
Sbjct: 29 NRHIQRSEFSQAVKVADQILSVAPGDEDALRCKIVALIKDDKIDNALSAIQS--SKTADF 86
Query: 2052 NFYKAYCLYRQNKLDEALECMQSQEQTSATMLLETQVLYRLGRMDACMDVYQRLRSFKIV 1873
+F+KAYCLYRQNKLDEAL ++ QE+ S TMLLE+Q+LYRLG+MDAC+D YQ+L KI
Sbjct: 87 SFFKAYCLYRQNKLDEALSSLRDQERNSMTMLLESQILYRLGKMDACVDTYQKLAKSKID 146
Query: 1872 SLEVNIVACLVSAGRASEVQGMMDSLKVKADRSFELGYNTACSLVQQTKYTEAKTLLLTS 1693
SLE+N VA L AGRASEVQG M++L+VKA SFEL YNTACSLV KYT+A+ LLL++
Sbjct: 147 SLEINYVAALTVAGRASEVQGAMEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSA 206
Query: 1692 QRNGKEALMXXXXXXXXXXXXXIPVSVQLAYVEQLLGHPKEAMDAYLDIINKNLADDASL 1513
+R G+E LM P++VQLAY++QLLGH +A +AY DIIN++LAD++SL
Sbjct: 207 RRIGQETLMEENLPDEDIEIELAPIAVQLAYLQQLLGHTSDASEAYKDIINRDLADESSL 266
Query: 1512 AVAINNFIALRGSKDASDGLRKIDRLLEKADLADGVHFARGLDFKLFSKQKEAIYSNRVL 1333
AVA+NN IAL+G KD SDGLRK+D+L EK A A GL+ K+ KQ+E IY+NR+L
Sbjct: 267 AVAVNNLIALKGPKDISDGLRKLDKLKEKD--APNFRLAHGLEPKISQKQRETIYANRLL 324
Query: 1332 LLLLANKIDQARELVAALLNMFPGSVITVVLQAAVLVRENKAGRAEEILGVFADKYPEKS 1153
LLL ANK+DQARE+VA + +MFP SV V+LQAAVLVRENKAG+AEEILG FA+ +P+KS
Sbjct: 325 LLLHANKMDQAREMVANMADMFPNSVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKS 384
Query: 1152 KVXXXXXXXXXXXAGHLQIAVDSLLRIPEIQHMPATVATIVTLRERVGDIDGAAAVFDTA 973
K+ AGH IA +SL +I +IQHMPAT+AT+V+L+ER GD+DGA AV D+A
Sbjct: 385 KLVLLARAQVAAAAGHPHIAFESLSKIQDIQHMPATIATLVSLKERAGDVDGAIAVLDSA 444
Query: 972 IQWWSNAMAEDSKLHVIMHKAASFKLKHGREEEAVKLYEALVRSEGSVEALVGLVTTAAS 793
++WWSNAM+ED+KL +++ +AASFKLKHGREE+A KLYE LV++ GS+EAL GLV T A
Sbjct: 445 VKWWSNAMSEDNKLDIVLQEAASFKLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVAR 504
Query: 792 VDVEKAETYEMQLKPLPGLKGVDVDSLEKTSGAKYTEDGG-HVRNVEVYEGQVXXXXXXX 616
VD++KAETYE QLKPLPGLK VDV++LE+TSGAK+ E+G H + +
Sbjct: 505 VDIKKAETYEKQLKPLPGLKEVDVENLERTSGAKHVENGADHGASDAYMVDKNKTKSKKK 564
Query: 615 XXXXXXXXXXXXXXXXXXXXXPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVGREK 445
PERWLP+RERSSYRPKRKDKRAAQVRGSQGA+ REK
Sbjct: 565 RKRKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAMVREK 621
>ref|XP_003531178.1| PREDICTED: signal recognition particle 72 kDa protein-like [Glycine
max]
Length = 662
Score = 670 bits (1728), Expect = 0.0
Identities = 355/599 (59%), Positives = 442/599 (73%), Gaps = 1/599 (0%)
Frame = -1
Query: 2232 NRHIQRSDFEQAVKVSDQVLGIIPGDVDALRCKIVGLIKVDDYDKALSTIQNLPSTLNHF 2053
NRHIQ S ++ AVK++DQ+L I PGD DALRCK+V LIK D + ALS I + L+ F
Sbjct: 26 NRHIQASAYDNAVKLTDQILAIAPGDEDALRCKVVALIKNDRVEDALSAIHSSKKQLDDF 85
Query: 2052 NFYKAYCLYRQNKLDEALECMQSQEQTSATMLLETQVLYRLGRMDACMDVYQRLRSFKIV 1873
+F KAYCLYRQNKLDEALE ++ QE TMLLE Q+LYRLG+MDAC+D+Y++ ++ KI
Sbjct: 86 HFLKAYCLYRQNKLDEALESLKRQESNDETMLLECQILYRLGKMDACLDIYRKFQNSKID 145
Query: 1872 SLEVNIVACLVSAGRASEVQGMMDSLKVKADRSFELGYNTACSLVQQTKYTEAKTLLLTS 1693
++E+N VA LV AGR+SEVQGM+DSL+VKA SFEL YNTACSL+ + KY++A+ LLL+
Sbjct: 146 NMEINSVAALVMAGRSSEVQGMLDSLRVKATSSFELAYNTACSLIARNKYSDAEQLLLSG 205
Query: 1692 QRNGKEALMXXXXXXXXXXXXXIPVSVQLAYVEQLLGHPKEAMDAYLDIINKNLADDASL 1513
+R G+E LM P++VQLAYV QLLG ++A++AY D+I +++AD++S+
Sbjct: 206 RRIGQEVLMEDNLADDDIEIELSPIAVQLAYVHQLLGRKQDAIEAYTDVIKRDMADESSI 265
Query: 1512 AVAINNFIALRGSKDASDGLRKIDRLLEKADLADGVHFARGLDFKLFSKQKEAIYSNRVL 1333
AVA+NN ++L+G KD SD LRK+DRL +K + A GLD KL +K+KEAIY+NRV+
Sbjct: 266 AVAVNNLVSLKGPKDVSDSLRKLDRLKDKEN--QSFRLAPGLDLKLSAKEKEAIYANRVV 323
Query: 1332 LLLLANKIDQARELVAALLNMFPGSVITVVLQAAVLVRENKAGRAEEILGVFADKYPEKS 1153
LLL ANKI+QARELV+AL +MFP SVI ++LQAA+LVRENKAGRAEEIL FA K+PEKS
Sbjct: 324 LLLHANKIEQARELVSALPDMFPESVIPILLQAALLVRENKAGRAEEILAQFASKFPEKS 383
Query: 1152 KVXXXXXXXXXXXAGHLQIAVDSLLRIPEIQHMPATVATIVTLRERVGDIDGAAAVFDTA 973
KV AGH IA DSL +I +IQHMPATVAT+V+L+ER GDIDGAAAV D A
Sbjct: 384 KVVHLARAQVAAAAGHPHIAADSLAKISDIQHMPATVATLVSLKERAGDIDGAAAVLDAA 443
Query: 972 IQWWSNAMAEDSKLHVIMHKAASFKLKHGREEEAVKLYEALVRSEGSVEALVGLVTTAAS 793
I+WWSNAM ED+KL+ I +AASFKL+HG+EE+A +LYE LV+S+GS+EALVGLVTT A
Sbjct: 444 IKWWSNAMTEDNKLNTITQEAASFKLRHGKEEDAAQLYEQLVKSQGSIEALVGLVTTVAR 503
Query: 792 VDVEKAETYEMQLKPLPGLKGVDVDSLEKTSGAKYTEDGGHVRNVEVY-EGQVXXXXXXX 616
+DV KAE YE QLK LPGLKG+DVDSLE+TSG K D V E Y EG+
Sbjct: 504 MDVVKAELYEKQLKALPGLKGIDVDSLERTSGVKQV-DAPRVGVPETYEEGKNKTKSKKK 562
Query: 615 XXXXXXXXXXXXXXXXXXXXXPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVGREKPD 439
PERWLPKRERS+YRPKRKDKRAAQVRGSQGAV R+K D
Sbjct: 563 RKRKPRYPKGFDPANPGPAPDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHD 621