BLASTX nr result

ID: Coptis23_contig00001394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001394
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262...   333   3e-89
emb|CAN75215.1| hypothetical protein VITISV_003516 [Vitis vinifera]   323   3e-86
ref|XP_003551516.1| PREDICTED: uncharacterized protein LOC100796...   317   3e-84
ref|XP_002317334.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83
gb|ACU21268.1| unknown [Glycine max]                                  310   4e-82

>ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262283 [Vitis vinifera]
          Length = 437

 Score =  333 bits (855), Expect = 3e-89
 Identities = 178/290 (61%), Positives = 213/290 (73%), Gaps = 13/290 (4%)
 Frame = -1

Query: 831 SVVSGESEKQKS-----MNGTGENGINNNRKES---VNSDGYIGKLEVYVDRARDIQNIC 676
           S VS E EKQKS       G    GI  +RKES    N D ++G LEVY+ +ARDI NIC
Sbjct: 14  SPVSIEPEKQKSDLFVRNPGCLSGGIEVHRKESGMVCNMDAFVGSLEVYIHQARDIHNIC 73

Query: 675 IYHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVRTVDCSLKCEVWMLSRV 496
           IYHKQDVYAKLCLTSDPE +VSTKIINGGGQNPVF+DN+RL+VRT + SLKCE+WMLSRV
Sbjct: 74  IYHKQDVYAKLCLTSDPENAVSTKIINGGGQNPVFNDNLRLSVRTTESSLKCEIWMLSRV 133

Query: 495 KNYLEDQLLGFALVPLSDLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMA 316
           KNYLEDQLLGFALVPLS++ + NGKL +EFSLS+ DLFHSP+GFV+LS+SY GA PEVMA
Sbjct: 134 KNYLEDQLLGFALVPLSEVLLNNGKLEKEFSLSSTDLFHSPAGFVRLSLSYNGASPEVMA 193

Query: 315 IPT-HASLNANTVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYG---XXXXXXX 148
           IP    +L  N   QD+EI +S+P+DY+ IEFPDP ++NEN LMVS+Y+G          
Sbjct: 194 IPALPTALATNEASQDTEISESMPSDYDAIEFPDPKIMNENQLMVSEYFGIPCTNLDSRS 253

Query: 147 XXXXXXXXDHYNS-GAGVHVVESFSEGSLNSTEVTKCDTPASSVSTTGSP 1
                    H +S   GV VVESFSEG++ S ++ K D+P SSVST GSP
Sbjct: 254 SEGTLDNDSHLSSEKLGVQVVESFSEGTIESVQLPKLDSPPSSVSTNGSP 303


>emb|CAN75215.1| hypothetical protein VITISV_003516 [Vitis vinifera]
          Length = 776

 Score =  323 bits (829), Expect = 3e-86
 Identities = 162/253 (64%), Positives = 197/253 (77%), Gaps = 5/253 (1%)
 Frame = -1

Query: 744 NSDGYIGKLEVYVDRARDIQNICIYHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDD 565
           N D ++G LEVY+ +ARDI NICIYHKQDVYAKLCLTSDPE +VSTKIINGGGQNPVF+D
Sbjct: 4   NMDAFVGSLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENAVSTKIINGGGQNPVFND 63

Query: 564 NVRLNVRTVDCSLKCEVWMLSRVKNYLEDQLLGFALVPLSDLFVENGKLAQEFSLSTNDL 385
           N+RL+VRT++ SLKCE+WMLSRVKNYLEDQLLGFALVPLS++ + NGKL +EFSLS+ DL
Sbjct: 64  NLRLSVRTMESSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLNNGKLEKEFSLSSTDL 123

Query: 384 FHSPSGFVQLSISYYGAQPEVMAIPT-HASLNANTVMQDSEIMDSVPNDYEKIEFPDPNV 208
           FHSP+GFV+LS+SY GA PEVMAIP    +L  N   QD+EI +S+P+DY+ IEFPDP +
Sbjct: 124 FHSPAGFVRLSLSYNGASPEVMAIPALPTALATNEASQDTEISESMPSDYDAIEFPDPKI 183

Query: 207 VNENHLMVSQYYG---XXXXXXXXXXXXXXXDHYNS-GAGVHVVESFSEGSLNSTEVTKC 40
           +NEN LMVS+Y+G                   H +S   GV VVESFSEG++ S ++ K 
Sbjct: 184 MNENQLMVSEYFGIPCTNLDSRSSEGTLDNDSHLSSEKLGVQVVESFSEGTIESVQLPKL 243

Query: 39  DTPASSVSTTGSP 1
           D+P SSVST GSP
Sbjct: 244 DSPPSSVSTNGSP 256


>ref|XP_003551516.1| PREDICTED: uncharacterized protein LOC100796499 isoform 1 [Glycine
           max] gi|356566598|ref|XP_003551517.1| PREDICTED:
           uncharacterized protein LOC100796499 isoform 2 [Glycine
           max] gi|356566600|ref|XP_003551518.1| PREDICTED:
           uncharacterized protein LOC100796499 isoform 3 [Glycine
           max] gi|356566602|ref|XP_003551519.1| PREDICTED:
           uncharacterized protein LOC100796499 isoform 4 [Glycine
           max]
          Length = 428

 Score =  317 bits (811), Expect = 3e-84
 Identities = 171/285 (60%), Positives = 209/285 (73%), Gaps = 10/285 (3%)
 Frame = -1

Query: 831 SVVSGESEKQKSMNGTGENG-----INNNRKESV--NSDGYIGKLEVYVDRARDIQNICI 673
           S V GESEK KS    G +      I  N KE V  N + Y+G L+VY+ +ARDIQNICI
Sbjct: 13  SSVLGESEKHKSDVFPGNSSPFSKDIEVNGKEVVMSNVEEYLGVLDVYIHQARDIQNICI 72

Query: 672 YHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVRTVDCSLKCEVWMLSRVK 493
           YHKQDVYAK+CLTS+PET+VSTK INGGG+NPVF++N+R++VRTVD SLKCE+WMLSRVK
Sbjct: 73  YHKQDVYAKICLTSNPETTVSTKTINGGGRNPVFNENLRIDVRTVDASLKCEIWMLSRVK 132

Query: 492 NYLEDQLLGFALVPLSDLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAI 313
           NYLEDQLLGFALVPLS++ V+NGKL +EFSLS+ DLFHSPSGFVQLS+SY GA P+VM I
Sbjct: 133 NYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMTI 192

Query: 312 PTHAS-LNANTVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYGXXXXXXXXXXX 136
               + +  +  +QDSE  +S+  D +KIEFPDP +VNE+HLMVS+Y+G           
Sbjct: 193 SAMPNKVATDAAVQDSETSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIPCEETQCSDS 252

Query: 135 XXXXDHYN--SGAGVHVVESFSEGSLNSTEVTKCDTPASSVSTTG 7
               D  N  S AGV +VESFS  S+ S + TK D+P SSVST G
Sbjct: 253 LATSDAENQSSEAGVRLVESFSACSVESVQPTKVDSPPSSVSTNG 297


>ref|XP_002317334.1| predicted protein [Populus trichocarpa] gi|222860399|gb|EEE97946.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  313 bits (803), Expect = 3e-83
 Identities = 166/286 (58%), Positives = 211/286 (73%), Gaps = 13/286 (4%)
 Frame = -1

Query: 825 VSGESEKQK-----SMNGTGENGINNNRKESV--NSDGYIGKLEVYVDRARDIQNICIYH 667
           V  E+EKQK        G+   GI  +R ++V  N + ++G +EVY+ +ARDIQNICIYH
Sbjct: 15  VGFETEKQKYDYPVQSTGSFSKGIEIHRNDAVVGNLEDFVGVVEVYIHQARDIQNICIYH 74

Query: 666 KQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVRTVDCSLKCEVWMLSRVKNY 487
           KQDVYAK CLTSDPE +VSTKIINGGG+NPVF+D++RLNV+TVD SLKCEV+M+SRV+NY
Sbjct: 75  KQDVYAKFCLTSDPEHTVSTKIINGGGRNPVFNDSLRLNVKTVDSSLKCEVFMMSRVRNY 134

Query: 486 LEDQLLGFALVPLSDLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAIPT 307
           LEDQLLGFALVPLS++ + NG L +EFSLS+ DLF+SP+GFVQLS+SY GA PEVMAIP 
Sbjct: 135 LEDQLLGFALVPLSEVLINNGNLDKEFSLSSTDLFYSPAGFVQLSLSYSGASPEVMAIPA 194

Query: 306 -HASLNANTVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYG-----XXXXXXXX 145
              +L AN  +QDSEI +S+P +++KIEFPDP VVNEN +MVS+Y+G             
Sbjct: 195 IPTALAANGTIQDSEIQESLPCEFDKIEFPDPKVVNENQMMVSEYFGIPCSSLDSEASES 254

Query: 144 XXXXXXXDHYNSGAGVHVVESFSEGSLNSTEVTKCDTPASSVSTTG 7
                  ++ +S  GVHVVESFS  + +S +V K  +P SSVST G
Sbjct: 255 LATSDTENYLSSENGVHVVESFSAATSDSIQVPKLGSPPSSVSTNG 300


>gb|ACU21268.1| unknown [Glycine max]
          Length = 434

 Score =  310 bits (793), Expect = 4e-82
 Identities = 165/285 (57%), Positives = 211/285 (74%), Gaps = 10/285 (3%)
 Frame = -1

Query: 831 SVVSGESEKQKSMNGTGENG-----INNNRKESV--NSDGYIGKLEVYVDRARDIQNICI 673
           S V GE EK KS   +G +      I  N KE V  N + ++G L+VY+ +ARDIQNICI
Sbjct: 13  SSVLGEGEKHKSDVFSGNSSPLSKDIEVNGKEVVMSNVEEFLGVLDVYIHQARDIQNICI 72

Query: 672 YHKQDVYAKLCLTSDPETSVSTKIINGGGQNPVFDDNVRLNVRTVDCSLKCEVWMLSRVK 493
           YHKQDVYAK+ LTS+PET++STK INGGG+NPVF++N+R++VRTVD SLKCE+WMLSRVK
Sbjct: 73  YHKQDVYAKISLTSNPETTMSTKTINGGGRNPVFNENLRIDVRTVDASLKCEIWMLSRVK 132

Query: 492 NYLEDQLLGFALVPLSDLFVENGKLAQEFSLSTNDLFHSPSGFVQLSISYYGAQPEVMAI 313
           NYLEDQLLGFALVPLS++ V+NGKL +EFSLS+ DLFHSPSGFVQLS+SY GA P+VMAI
Sbjct: 133 NYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMAI 192

Query: 312 PTHAS-LNANTVMQDSEIMDSVPNDYEKIEFPDPNVVNENHLMVSQYYG--XXXXXXXXX 142
               + +  +  +QDS+  +S+  D +KIEFPDP +VNE+HLMVS+Y+G           
Sbjct: 193 SAMPNKVATDGTVQDSDTSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIRCKETQCSDS 252

Query: 141 XXXXXXDHYNSGAGVHVVESFSEGSLNSTEVTKCDTPASSVSTTG 7
                 ++++S AGV +VESFS  S+ S + TK D+P SSVST G
Sbjct: 253 LATSDAENHSSEAGVQLVESFSACSVESVQPTKVDSPPSSVSTNG 297


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