BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001376
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB97030.1| unknown [Brassica rapa]                                133   2e-30
gb|AEX93424.1| chloroplast photosystem I reaction center subunit...   137   3e-30
ref|XP_002280687.1| PREDICTED: photosystem I reaction center sub...   132   3e-30
emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]   132   3e-30
gb|AAP03873.1| photosystem I reaction center subunit X psaK [Nic...   132   3e-30

>gb|ABB97030.1| unknown [Brassica rapa]
          Length = 130

 Score =  133 bits (334), Expect(2) = 2e-30
 Identities = 67/86 (77%), Positives = 71/86 (82%)
 Frame = +2

Query: 311 RCSFIGSSTNLIMITTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 490
           +C FIGSSTNLIM+T+T+LMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLA
Sbjct: 45  KCDFIGSSTNLIMVTSTTLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLA 104

Query: 491 DTLACGTXXXXXXXXXXXXXKNIGAI 568
           DTLACGT             KNIGAI
Sbjct: 105 DTLACGTVGHIIGVGVVLGLKNIGAI 130



 Score = 25.8 bits (55), Expect(2) = 2e-30
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3

Query: 150 ATVMTSLPQFIGLR 191
           +TVMT+LPQF GLR
Sbjct: 3   STVMTTLPQFNGLR 16


>gb|AEX93424.1| chloroplast photosystem I reaction center subunit X psaK, partial
           [Wolffia australiana]
          Length = 128

 Score =  137 bits (344), Expect = 3e-30
 Identities = 69/86 (80%), Positives = 72/86 (83%)
 Frame = +2

Query: 311 RCSFIGSSTNLIMITTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 490
           RC FIGSSTN+IM+TTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA
Sbjct: 43  RCDFIGSSTNIIMVTTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 102

Query: 491 DTLACGTXXXXXXXXXXXXXKNIGAI 568
           DTLACGT             KNIGA+
Sbjct: 103 DTLACGTVGHILGVGIVLGLKNIGAL 128


>ref|XP_002280687.1| PREDICTED: photosystem I reaction center subunit psaK,
           chloroplastic [Vitis vinifera]
           gi|297740792|emb|CBI30974.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  132 bits (333), Expect(2) = 3e-30
 Identities = 67/86 (77%), Positives = 70/86 (81%)
 Frame = +2

Query: 311 RCSFIGSSTNLIMITTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 490
           RC FIGS TNLIM+T+TSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA
Sbjct: 44  RCDFIGSPTNLIMVTSTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 103

Query: 491 DTLACGTXXXXXXXXXXXXXKNIGAI 568
           DTLACGT             KNIG +
Sbjct: 104 DTLACGTVGHIIGVGVVLGLKNIGVL 129



 Score = 25.4 bits (54), Expect(2) = 3e-30
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 153 TVMTSLPQFIGLR 191
           TVMT+LPQF GLR
Sbjct: 4   TVMTTLPQFNGLR 16


>emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]
          Length = 129

 Score =  132 bits (333), Expect(2) = 3e-30
 Identities = 67/86 (77%), Positives = 70/86 (81%)
 Frame = +2

Query: 311 RCSFIGSSTNLIMITTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 490
           RC FIGS TNLIM+T+TSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA
Sbjct: 44  RCDFIGSPTNLIMVTSTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 103

Query: 491 DTLACGTXXXXXXXXXXXXXKNIGAI 568
           DTLACGT             KNIG +
Sbjct: 104 DTLACGTVGHIIGVGVVLGLKNIGVL 129



 Score = 25.4 bits (54), Expect(2) = 3e-30
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 153 TVMTSLPQFIGLR 191
           TVMT+LPQF GLR
Sbjct: 4   TVMTTLPQFNGLR 16


>gb|AAP03873.1| photosystem I reaction center subunit X psaK [Nicotiana tabacum]
          Length = 130

 Score =  132 bits (332), Expect(2) = 3e-30
 Identities = 67/86 (77%), Positives = 70/86 (81%)
 Frame = +2

Query: 311 RCSFIGSSTNLIMITTTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 490
           RC FIGS TNLIM+T+TSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA
Sbjct: 45  RCDFIGSPTNLIMVTSTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLA 104

Query: 491 DTLACGTXXXXXXXXXXXXXKNIGAI 568
           DTLACG              KNIGA+
Sbjct: 105 DTLACGVVGHIIGVGVVLGLKNIGAL 130



 Score = 25.8 bits (55), Expect(2) = 3e-30
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3

Query: 150 ATVMTSLPQFIGLR 191
           AT+MTSLPQF GL+
Sbjct: 3   ATMMTSLPQFNGLK 16