BLASTX nr result

ID: Coptis23_contig00001372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001372
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26171.3| unnamed protein product [Vitis vinifera]              381   e-103
ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252...   379   e-103
ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ric...   372   e-101
emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]   368   1e-99
ref|XP_004134157.1| PREDICTED: endo-1,3;1,4-beta-D-glucanase-lik...   366   4e-99

>emb|CBI26171.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  381 bits (978), Expect = e-103
 Identities = 182/239 (76%), Positives = 204/239 (85%)
 Frame = +3

Query: 30  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 209
           MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+PN RKLA
Sbjct: 1   MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEAPNFRKLA 60

Query: 210 DKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKPVIAALKSKGIST 389
           DK+AAAGFYVVAPDF++GD Y P+ AERP  VWIK H  DKG E+ KPVI ALKSKG+S 
Sbjct: 61  DKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEALKSKGVSA 120

Query: 390 IGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVLGAEIDQMSPPEL 569
           IGAAGFCWGAKVVV+LAKS YI+AAVL HPSFV++DDIK VK P AVLGAEIDQMSPP L
Sbjct: 121 IGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLGAEIDQMSPPAL 180

Query: 570 VKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 746
           VKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQDML WF+KYVK
Sbjct: 181 VKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQDMLGWFSKYVK 239


>ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252854 [Vitis vinifera]
          Length = 505

 Score =  379 bits (972), Expect = e-103
 Identities = 184/250 (73%), Positives = 208/250 (83%), Gaps = 4/250 (1%)
 Frame = +3

Query: 9    HFMKKQDMSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYES 188
            +F  K+ MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+
Sbjct: 256  YFGSKKAMSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEA 315

Query: 189  PNLRKLADKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKPVIAAL 368
            PN RKLADK+AAAGFYVVAPDF++GD Y P+ AERP  VWIK H  DKG E+ KPVI AL
Sbjct: 316  PNFRKLADKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEAL 375

Query: 369  KSKGISTIGAAGFCWG----AKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVLG 536
            KSKG+S IGAAGFCWG    AKVVV+LAKS YI+AAVL HPSFV++DDIK VK P AVLG
Sbjct: 376  KSKGVSAIGAAGFCWGGILAAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLG 435

Query: 537  AEIDQMSPPELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQD 716
            AEIDQMSPP LVKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQD
Sbjct: 436  AEIDQMSPPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQD 495

Query: 717  MLDWFTKYVK 746
            ML WF+KYVK
Sbjct: 496  MLGWFSKYVK 505



 Score =  311 bits (797), Expect = 1e-82
 Identities = 152/240 (63%), Positives = 184/240 (76%), Gaps = 3/240 (1%)
 Frame = +3

Query: 30  MSSSQCCENPPTLTPTSGVGHVEQIGG---LSSYISASSHSKLGVLLVSDIFGYESPNLR 200
           MS S+C ENPP+ +P SG G V+++GG   L +Y++    SKL +L VSD+FGYE+PNLR
Sbjct: 1   MSISRCYENPPSFSPGSGAGTVQEVGGGGRLKAYVTGPLDSKLAILFVSDVFGYEAPNLR 60

Query: 201 KLADKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKPVIAALKSKG 380
           KLADK+AAAGF VVAPDF +GDP +        QVWI  H  DKG E+AK VIAAL+SKG
Sbjct: 61  KLADKVAAAGFLVVAPDFFYGDPVDLSNPNFDRQVWIAAHGTDKGCEDAKAVIAALRSKG 120

Query: 381 ISTIGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVLGAEIDQMSP 560
           +S IGAAGFCWG KVVV LA SD+I+AAV+ HP  +T D+I +VKTPIA+LGAEID  SP
Sbjct: 121 VSAIGAAGFCWGGKVVVNLASSDHIQAAVVLHPGRITDDEINEVKTPIAILGAEIDDASP 180

Query: 561 PELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKY 740
           PE ++ F E+LSAK  +D FVKIFPGVAHGWTVRY  EDE  VK A+EAH DML+WF+KY
Sbjct: 181 PEQLEHFGEILSAKSGIDCFVKIFPGVAHGWTVRYSVEDEWGVKSAEEAHGDMLNWFSKY 240


>ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ricinus communis]
           gi|223535996|gb|EEF37655.1|
           endo-1,3-1,4-beta-d-glucanase, putative [Ricinus
           communis]
          Length = 239

 Score =  372 bits (954), Expect = e-101
 Identities = 173/239 (72%), Positives = 207/239 (86%)
 Frame = +3

Query: 30  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 209
           MS SQCCENPPTL+  SG+G V +IGGL  Y +  S  K  ++L+SDIFG+E+PNLRKLA
Sbjct: 1   MSGSQCCENPPTLSSGSGIGSVTEIGGLKVYATGPSDCKRSIVLISDIFGWEAPNLRKLA 60

Query: 210 DKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKPVIAALKSKGIST 389
           DK+AAAGFYVV PDF +GDPY PE A+RPL +WIK+H  DKG E+AKP+IAALKSKG+S 
Sbjct: 61  DKVAAAGFYVVVPDFFYGDPYVPENADRPLPIWIKSHGTDKGFEDAKPIIAALKSKGVSA 120

Query: 390 IGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVLGAEIDQMSPPEL 569
           IGAAGFCWGAKVVV+LAKSD I+AAVL HPSFVTVDDIK++K PIA+LGAEID +SPP L
Sbjct: 121 IGAAGFCWGAKVVVELAKSDPIQAAVLLHPSFVTVDDIKEIKEPIAILGAEIDHLSPPTL 180

Query: 570 VKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 746
           +KQF+EVLSA+PE++ +VKIFPGVAHGWTVRYK EDE AV+CA+EAH+DMLDWF +YV+
Sbjct: 181 LKQFEEVLSARPEINGYVKIFPGVAHGWTVRYKTEDEKAVECAEEAHKDMLDWFAEYVQ 239


>emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]
          Length = 251

 Score =  368 bits (945), Expect = 1e-99
 Identities = 181/251 (72%), Positives = 206/251 (82%), Gaps = 12/251 (4%)
 Frame = +3

Query: 30  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYES------- 188
           MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GY +       
Sbjct: 1   MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYNTNCFSCMA 60

Query: 189 --PNL---RKLADKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKP 353
             P++   +KLADK+AAAGFYVVAPDF++GDPY P+ AERPL VWIK H  DKG E+ KP
Sbjct: 61  SKPDIMKNKKLADKVAAAGFYVVAPDFLYGDPYVPDKAERPLPVWIKDHGMDKGFEDTKP 120

Query: 354 VIAALKSKGISTIGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVL 533
           VI ALKSKG+S IGAAGFCWGAKVVV+LAKS YI+AAVL HPSFV++DDIK VK P AVL
Sbjct: 121 VIEALKSKGVSAIGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVL 180

Query: 534 GAEIDQMSPPELVKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQ 713
           GAEIDQMSPP LVKQF+E+L+AKP VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQ
Sbjct: 181 GAEIDQMSPPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQ 240

Query: 714 DMLDWFTKYVK 746
           DML WF+KYVK
Sbjct: 241 DMLGWFSKYVK 251


>ref|XP_004134157.1| PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Cucumis sativus]
          Length = 239

 Score =  366 bits (940), Expect = 4e-99
 Identities = 167/239 (69%), Positives = 205/239 (85%)
 Frame = +3

Query: 30  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPNLRKLA 209
           MS  QCC NPPTL P+SG GH+EQ+GGL++Y+S S  SKL VL ++D++G+E+P LRKLA
Sbjct: 1   MSGPQCCSNPPTLNPSSGAGHIEQLGGLTTYVSGSPDSKLAVLFITDVYGFEAPLLRKLA 60

Query: 210 DKIAAAGFYVVAPDFMHGDPYNPEIAERPLQVWIKTHEPDKGAEEAKPVIAALKSKGIST 389
           DK+AAAGF+VVAPDF HGDP+ P+ A RP++VW++ HE +KG ++AKPV+ ALK+KGI+ 
Sbjct: 61  DKVAAAGFFVVAPDFFHGDPFVPDDANRPIRVWLQDHETEKGFDDAKPVVEALKNKGITA 120

Query: 390 IGAAGFCWGAKVVVQLAKSDYIKAAVLCHPSFVTVDDIKDVKTPIAVLGAEIDQMSPPEL 569
           IGA G CWGAKVVV+LAK + I+AAVL HPSFVTVDDIK VK PI++LGAEID MSPPEL
Sbjct: 121 IGAVGICWGAKVVVELAKVELIQAAVLLHPSFVTVDDIKGVKAPISILGAEIDHMSPPEL 180

Query: 570 VKQFDEVLSAKPEVDRFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 746
           +K+F+E+LSAKPEVD FVKIFP V+HGWTVRYK EDE AVKCA EAH+D+L WFTKYVK
Sbjct: 181 LKEFEEILSAKPEVDGFVKIFPKVSHGWTVRYKVEDEEAVKCADEAHEDLLAWFTKYVK 239


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