BLASTX nr result
ID: Coptis23_contig00001371
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001371 (2283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr... 613 e-173 emb|CBI37506.3| unnamed protein product [Vitis vinifera] 592 e-166 ref|XP_002524432.1| transcription initiation factor ia, putative... 575 e-161 ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr... 565 e-158 ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr... 564 e-158 >ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Vitis vinifera] Length = 636 Score = 613 bits (1581), Expect = e-173 Identities = 336/619 (54%), Positives = 424/619 (68%), Gaps = 30/619 (4%) Frame = +1 Query: 223 IVLFVRDALKSVTNTDDENYTDHYSQLIGVLNSTKRYNPDQVASLVTSLRALSRVTSYID 402 +V VR AL+SV D +D Y QLIGVL+ +R PD+VA LVTSL+ALS S ID Sbjct: 25 LVYHVRHALQSVPLGD----SDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCID 80 Query: 403 SYHHGSLLDSIFDIKMWDYGTDVMDALMELIVSLSAS-GYVVQC-LHMLVKSFTPPKNFL 576 HH SLL SIF + +W+YG DVMDAL+ELI+SL+AS G + C L MLV +F PP + L Sbjct: 81 MVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLL 140 Query: 577 PLLSQPRGIAKKKEVLDRVHSALKEIADLVPLAPTTLQFRVLELMPHITNEN-------- 732 L QPRG+A+K +VL RVHS LK+IADLVPLAP+ L V++ MP++ + Sbjct: 141 DFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPVSSICST 200 Query: 733 ----EVYVENMLRLESGVFGTYLGKEILRAVIYRLVELDVEIEWEYILLDDTGRDIFNME 900 ++YVENMLRLE G +G +L A++ RLV+LDVEI WE +L DD + IF ME Sbjct: 201 LFRIQIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEME 260 Query: 901 LEDIDEDAEYADGNEGRQWK-------LQPDVCAEKLDRLMVLMCEHIKSCADDGRLIEV 1059 LED++E A+ + + G + L ++ AEKLD LMVL EH++SC GRLIEV Sbjct: 261 LEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEV 320 Query: 1060 FETLLMSFETAILPAHKSKFAQFVIFYACSLDPEVCGEKFAKKLYKSFVYGA-TPLIRMS 1236 FETL++SF+T +L A KSKFAQFV+FYAC+LDPE CG +FA+ L FV PL RMS Sbjct: 321 FETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMS 380 Query: 1237 AVAYLASYLARGRFLPSDLVVSTLESLVDWCSKYCKSQAIQEKSMNPELHKVFYSGCQAV 1416 AVAYLASYL+RG+FL + V + LE LV WC +YCK I + +NP+ H+VFYSGCQA+ Sbjct: 381 AVAYLASYLSRGKFLTASFVANILERLVVWCLEYCK---IHDGDINPKAHQVFYSGCQAI 437 Query: 1417 MYVLCFRMRSIMDLPHLKSQLLCMPLEDILWNQLNPLKVCLPSIVNEFRLQAKAARLFAV 1596 MYVLCFRMRS+M++PHL+SQLL +PLE IL + L+PLKVCLPSIV EF QAKAARLF V Sbjct: 438 MYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTV 497 Query: 1597 SERLVFENLLESELSRTYGGMERLDMFFPFDPCLLKNCDRFIRPNFIYWSLANFTQEHXX 1776 SE +F +LLESELSR +GG+ERLDMFFPFDPCLLK CDRFIRPNF+YWS+ T + Sbjct: 498 SETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGE 557 Query: 1777 XXXXXXXXXXXXXXXXXXXVRESGMGMSYDGHEHELDAFENSIRQMSITPNVSVMH---- 1944 + + M SYD H+ ELD F++S+ +MSITP S+ + Sbjct: 558 DSSDEEPAEDYEASHPDDVMNDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRFGD 617 Query: 1945 ----NMPARLRPSTSPESL 1989 MP+R+RPSTSPESL Sbjct: 618 ELKVQMPSRIRPSTSPESL 636 >emb|CBI37506.3| unnamed protein product [Vitis vinifera] Length = 607 Score = 592 bits (1527), Expect = e-166 Identities = 331/610 (54%), Positives = 416/610 (68%), Gaps = 21/610 (3%) Frame = +1 Query: 223 IVLFVRDALKSVTNTDDENYTDHYSQLIGVLNSTKRYNPDQVASLVTSLRALSRVTSYID 402 +V VR AL+SV D +D Y QLIGVL+ +R PD+VA LVTSL+ALS S ID Sbjct: 25 LVYHVRHALQSVPLGD----SDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCID 80 Query: 403 SYHHGSLLDSIFDIKMWDYGTDVMDALMELIVSLSAS-GYVVQC-LHMLVKSFTPPKNFL 576 HH SLL SIF + +W+YG DVMDAL+ELI+SL+AS G + C L MLV +F PP + L Sbjct: 81 MVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPPYSLL 140 Query: 577 PLLSQPRGIAKKKEVLDRVHSALKEIADLVPLAPTTLQFRVLELMPHITNENE---VYVE 747 L QPRG+A+K +VL RVHS LK+IADLVPLAP+ L V++ MP++ + +YVE Sbjct: 141 DFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIMIYVE 200 Query: 748 NMLRLESGVFGTYLGKEILRAVIYRLVELDVEIEWEYILLDDTGRDIFNMELEDIDEDAE 927 NMLRLE G +G +L A++ RLV+LDVEI WE +L DD + IF MELED++E A+ Sbjct: 201 NMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPAD 260 Query: 928 YADGNEGRQWK-------LQPDVCAEKLDRLMVLMCEHIKSCADDGRLIEVFETLLMSFE 1086 + + G + L ++ AEKLD LMVL EH++SC GRLIEVFETL++SF+ Sbjct: 261 DVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQ 320 Query: 1087 TAILPAHKSKFAQFVIFYACSLDPEVCGEKFAKKLYKSFVYGA-TPLIRMSAVAYLASYL 1263 T +L A KSKFAQFV+FYAC+LDPE CG +FA+ L FV PL RMSAVAYLASYL Sbjct: 321 TTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYL 380 Query: 1264 ARGRFLPSDLVVSTLESLVDWCSKYCKSQAIQEKSMNPELHKVFYSGCQAVMYVLCFRMR 1443 +RG+FL + V + LE LV WC +YCK I + +NP+ H+VFYSGCQA+MYVLCFRMR Sbjct: 381 SRGKFLTASFVANILERLVVWCLEYCK---IHDGDINPKAHQVFYSGCQAIMYVLCFRMR 437 Query: 1444 SIMDLPHLKSQLLCMPLEDILWNQLNPLKVCLPSIVNEFRLQAKAARLFAVSERLVFENL 1623 S+M++PHL+SQLL +PLE IL + L+PLKVCLPSIV EF QAKAARLF VSE +F +L Sbjct: 438 SMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDL 497 Query: 1624 LESELSRTYGGMERLDMFFPFDPCLLKNCDRFIRPNFIYWSLANFTQEHXXXXXXXXXXX 1803 LESELSR +GG+ERLDMFFPFDPCLLK CDRFIRPNF+YWS+ T + Sbjct: 498 LESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGED-------- 549 Query: 1804 XXXXXXXXXXVRESGMGMSYDGHEHELDAFENSIRQMSITPNVSVMH--------NMPAR 1959 S + D D F++S+ +MSITP S+ + MP+R Sbjct: 550 ------------SSDEEPAEDYEASHPDDFDHSMNKMSITPKNSLYYRFGDELKVQMPSR 597 Query: 1960 LRPSTSPESL 1989 +RPSTSPESL Sbjct: 598 IRPSTSPESL 607 >ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis] gi|223536316|gb|EEF37967.1| transcription initiation factor ia, putative [Ricinus communis] Length = 640 Score = 575 bits (1481), Expect = e-161 Identities = 322/650 (49%), Positives = 414/650 (63%), Gaps = 31/650 (4%) Frame = +1 Query: 133 MGMELNSNYSNITXXXXXXXXXXXXXXXXXIVLFVRDALKSVTNTDDENYTDHYSQLIGV 312 MG+EL+S Y +V VRDAL SV D T+ Y QL+GV Sbjct: 1 MGVELDSQYKK---EIEDMEDDGVNYTDSDLVYHVRDALHSVQYGD----TNSYDQLVGV 53 Query: 313 LNSTKRYNPDQVASLVTSLRALSRVTSYIDSYHHGSLLDSIFDIKMWDYGTDVMDALMEL 492 ++ ++R PD VA L+TSL+ALS SYID HH LL SIF + +W+YG DVM+AL+EL Sbjct: 54 MHHSQRLTPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLEL 113 Query: 493 IVSLSASG--YVVQCLHMLVKSFTPPKNFLPLLSQPRGIAKKKEVLDRVHSALKEIADLV 666 I++L+AS Y+ CL MLV +F PP + +L PRG AKK++VL R+H+AL++IA L+ Sbjct: 114 IIALAASNGKYIDPCLKMLVTNFVPPMYLIDILKLPRGQAKKEQVLSRLHTALEDIAHLI 173 Query: 667 PLAPTTLQFRVLELMPHITN---------------ENEVYVENMLRLESGVFGTYLGKEI 801 P+A + L V+ + I E+YVENMLRLESG ++G + Sbjct: 174 PMAASRLSTEVVSEIQRIPTTFKKDQYHEKDRVKYRTEIYVENMLRLESGAIREFVGSRM 233 Query: 802 LRAVIYRLVELDVEIEWEYILLDDTGRDIFNMELEDIDE---DAEYADGNEGRQW----K 960 L AV+ +L++LDV I W+ IL DD+ + IF +ELED DE D EY D E + Sbjct: 234 LMAVVDKLIDLDVAIGWDDILRDDSCKGIFAIELEDADEVSDDDEYNDYGELPRTLSHKS 293 Query: 961 LQPDVCAEKLDRLMVLMCEHIKSCADDGRLIEVFETLLMSFETAILPAHKSKFAQFVIFY 1140 L +V A+ LD LMV + EH++ CA++ RL +VFETLL SF IL +KSKFAQFV+FY Sbjct: 294 LGENVAADLLDSLMVRIFEHLELCANNKRLNDVFETLLDSFMLTILNTYKSKFAQFVMFY 353 Query: 1141 ACSLDPEVCGEKFAKKLYKSFVYGATPLIRMSAVAYLASYLARGRFLPSDLVVSTLESLV 1320 AC+LDPE CG +FA++L F YG PL RMSAVAYLASYLAR +FLP V STL+ LV Sbjct: 354 ACALDPENCGVEFAERLRDRFTYGENPLTRMSAVAYLASYLARAKFLPIAFVASTLKRLV 413 Query: 1321 DWCSKYCKSQAIQEKSMNPELHKVFYSGCQAVMYVLCFRMRSIMDLPHLKSQLLCMPLED 1500 DWCS+YC++Q + MNP+ H+VFYSGCQA++YVLCFRM S+MD+P LKSQLL MPLE Sbjct: 414 DWCSEYCRNQ---DGDMNPKAHRVFYSGCQAILYVLCFRMSSMMDIPWLKSQLLHMPLEQ 470 Query: 1501 ILWNQLNPLKVCLPSIVNEFRLQAKAARLFAVSERLVFENLLESELSRTYGGMERLDMFF 1680 I+ ++L PLKVCLPSIV EF QAKAA LF S+ FE++LESE S+ +GG+ERLDMFF Sbjct: 471 IMKHKLGPLKVCLPSIVEEFLKQAKAAHLFTTSQTSSFEDVLESEFSKDFGGLERLDMFF 530 Query: 1681 PFDPCLLKNCDR-FIRPNFIYWSLANFTQEHXXXXXXXXXXXXXXXXXXXXXVRESGMGM 1857 PFDPCLL+ CDR FIRPNF+YW T E GM Sbjct: 531 PFDPCLLRTCDRSFIRPNFVYWKDVRTTYGSDEEDSSDEDIAEDFTDINGGSYMEEGMAT 590 Query: 1858 SYDGHEHELDAFENSIRQMSITP------NVSVMHNMPARLRPSTSPESL 1989 S DG +LD F+ ++ +MSITP MP+++RPSTSPESL Sbjct: 591 SLDGQHLDLDEFDYAMNKMSITPKNRFGIRFGERMQMPSKIRPSTSPESL 640 >ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] Length = 625 Score = 565 bits (1455), Expect = e-158 Identities = 309/610 (50%), Positives = 413/610 (67%), Gaps = 23/610 (3%) Frame = +1 Query: 223 IVLFVRDALKSVTNTDDENYTDHYSQLIGVLNSTKRYNPDQVASLVTSLRALSRVTSYID 402 +V F+R L SV+ D D Y+QL+GV++ R +PD+VA LVT L+ALS S ID Sbjct: 25 LVDFIRGFLSSVSLGD----IDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCID 80 Query: 403 SYHHGSLLDSIFDIKMWDYGTDVMDALMELIVSLSASG--YVVQCLHMLVKSFTPPKNFL 576 H SLL +IF + +WDYG++VMDAL+ELI+SL+ S YV CL MLV +F PP +++ Sbjct: 81 IILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYM 140 Query: 577 PLLSQPRGIAKKKEVLDRVHSALKEIADLVPLAPTTLQFRVLELMPHIT-NEN--EVYVE 747 LL +P G+ +K+EVL RVH+ALK+I+DLVPLAP L+ +V+ M + NE+ +YVE Sbjct: 141 DLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVE 200 Query: 748 NMLRLESGVFGTYLGKEILRAVIYRLVELDVEIEWEYILLDDTGRDIFNMELED------ 909 NMLRLE G ++G++IL A++ +L++LDVEI W+ IL DD + IF MELED Sbjct: 201 NMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTD 260 Query: 910 -IDEDAEYADGNEGRQWKLQPDVCAEKLDRLMVLMCEHIKSCADDGRLIEVFETLLMSFE 1086 I+ED+ R+ L +V AE LD L+VL EH++SC DGRL EVF+ LL+SF+ Sbjct: 261 DINEDSSELPRELSRR-SLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQ 319 Query: 1087 TAILPAHKSKFAQFVIFYACSLDPEVCGEKFAKKLYKSFVY-GATPLIRMSAVAYLASYL 1263 +L A+KSKFAQF++FYACSLDPEVCG +FA L FV PLIRMSAV+YLAS+L Sbjct: 320 RTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFL 379 Query: 1264 ARGRFLPSDLVVSTLESLVDWCSKYCKSQAIQEKSMNPELHKVFYSGCQAVMYVLCFRMR 1443 +RG+FL + LV + L+ LVDWC +Y K+ + NP+ HKVFYSGCQA+MYVLCFRMR Sbjct: 380 SRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDP---NPKAHKVFYSGCQAIMYVLCFRMR 436 Query: 1444 SIMDLPHLKSQLLCMPLEDILWNQLNPLKVCLPSIVNEFRLQAKAARLFAVSERLVFENL 1623 SI+++P LKSQLL MP+ +L ++L+PLKVCLPSIV EF QAK A LF SE +F L Sbjct: 437 SILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGL 496 Query: 1624 LESELSRTYGGMERLDMFFPFDPCLLKNCDRFIRPNFIYWSLANFT-----QEHXXXXXX 1788 LES+ SR++GG+ERLDMFFPFDPCLLK CDR++RP+F+YWS+ T +E Sbjct: 497 LESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEDDGGSS 556 Query: 1789 XXXXXXXXXXXXXXXVRESGMGMSYDGHEHELDAFENSIRQMSITPNVSVMH-----NMP 1953 + + M +SYD + +LD + + +MSITP S+ + MP Sbjct: 557 DEDAEIFPDRIDENLMDDEAMAISYDDQDFDLD---SGLNKMSITPRNSLQYRCDFVQMP 613 Query: 1954 ARLRPSTSPE 1983 +R+RPS SPE Sbjct: 614 SRIRPSMSPE 623 >ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor RRN3-like [Cucumis sativus] Length = 626 Score = 564 bits (1454), Expect = e-158 Identities = 309/611 (50%), Positives = 413/611 (67%), Gaps = 24/611 (3%) Frame = +1 Query: 223 IVLFVRDALKSVTNTDDENYTDHYSQLIGVLNSTKRYNPDQVASLVTSLRALSRVTSYID 402 +V F+R L SV+ D D Y+QL+GV++ R +PD+VA LVT L+ALS S ID Sbjct: 25 LVDFIRGFLSSVSLGD----IDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCID 80 Query: 403 SYHHGSLLDSIFDIKMWDYGTDVMDALMELIVSLSASG--YVVQCLHMLVKSFTPPKNFL 576 H SLL +IF + +WDYG++VMDAL+ELI+SL+ S YV CL MLV +F PP +++ Sbjct: 81 IILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPPNSYM 140 Query: 577 PLLSQPRGIAKKKEVLDRVHSALKEIADLVPLAPTTLQFRVLELMPHIT-NEN--EVYVE 747 LL +P G+ +K+EVL RVH+ALK+I+DLVPLAP L+ +V+ M + NE+ +YVE Sbjct: 141 DLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVE 200 Query: 748 NMLRLESGVFGTYLGKEILRAVIYRLVELDVEIEWEYILLDDTGRDIFNMELED------ 909 NMLRLE G ++G++IL A++ +L++LDVEI W+ IL DD + IF MELED Sbjct: 201 NMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTD 260 Query: 910 -IDEDAEYADGNEGRQWKLQPDVCAEKLDRLMVLMCEHIKSCADDGRLIEVFETLLMSFE 1086 I+ED+ R+ L +V AE LD L+VL EH++SC DGRL EVF+ LL+SF+ Sbjct: 261 DINEDSSELPRELSRR-SLGGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQ 319 Query: 1087 TAILPAHKSKFAQFVIFYACSLDPEVCGEKFAKKLYKSFVY-GATPLIRMSAVAYLASYL 1263 +L A+KSKFAQF++FYACSLDPEVCG +FA L FV PLIRMSAV+YLAS+L Sbjct: 320 RTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFL 379 Query: 1264 ARGRFLPSDLVVSTLESLVDWCSKYCKSQAIQEKSMNPELHKVFYSGCQAVMYVLCFRMR 1443 +RG+FL + LV + L+ LVDWC +Y K+ + NP+ HKVFYSGCQA+MYVLCFRMR Sbjct: 380 SRGKFLTTSLVTTILKRLVDWCLEYGKTLNVDP---NPKAHKVFYSGCQAIMYVLCFRMR 436 Query: 1444 SIMDLPHLKSQLLCMPLEDILWNQLNPLKVCLPSIVNEFRLQAKAARLFAVSERLVFENL 1623 SI+++P LKSQLL MP+ +L ++L+PLKVCLPSIV EF QAK A LF SE +F L Sbjct: 437 SILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGL 496 Query: 1624 LESELSRTYGGMERLDMFFPFDPCLLKNCDRFIRPNFIYWSLANFT------QEHXXXXX 1785 LES+ SR++GG+ERLDMFFPFDPCLLK CDR++RP+F+YWS+ T +E Sbjct: 497 LESDYSRSFGGLERLDMFFPFDPCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEEDDGGS 556 Query: 1786 XXXXXXXXXXXXXXXXVRESGMGMSYDGHEHELDAFENSIRQMSITPNVSVMH-----NM 1950 + + M +SYD + +LD + + +MSITP S+ + M Sbjct: 557 SDEDAEIFPDRIDENLMDDEAMAISYDDQDFDLD---SGLNKMSITPRNSLQYRCDFVQM 613 Query: 1951 PARLRPSTSPE 1983 P+R+RPS SPE Sbjct: 614 PSRIRPSMSPE 624