BLASTX nr result

ID: Coptis23_contig00001367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001367
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304636.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
ref|XP_002297881.1| predicted protein [Populus trichocarpa] gi|2...   582   e-164
ref|XP_002271514.1| PREDICTED: transaldolase isoform 1 [Vitis vi...   579   e-163
gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum]         578   e-162
gb|AAB54016.1| transaldolase [Solanum tuberosum]                      575   e-162

>ref|XP_002304636.1| predicted protein [Populus trichocarpa] gi|222842068|gb|EEE79615.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  589 bits (1518), Expect = e-166
 Identities = 317/447 (70%), Positives = 346/447 (77%), Gaps = 5/447 (1%)
 Frame = +2

Query: 167  MSSISKLTNPIFAAKLNI-----SEPKPIICFQTRSLFHXXXXXXXXXXXITTNCVPRTS 331
            M++ISKL+NP  AA L+      S PK  + F T++                T   PRTS
Sbjct: 1    MATISKLSNPSPAASLSAPSRSSSLPKVFLGFSTKTSLSKVRLSLK-----NTQPSPRTS 55

Query: 332  LTVKCSKVDGNGIQEKKTSLHDLYELEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAI 511
            L V+CS+  GNG   K+T+LHDLYE EGQSPWYDNLCRPVTDL+PLI SGVRGVTSNPAI
Sbjct: 56   LVVRCSQSSGNGSPIKRTTLHDLYEREGQSPWYDNLCRPVTDLIPLIESGVRGVTSNPAI 115

Query: 512  FQKAISTSNAYNDQFRELVQAGKDIQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSV 691
            FQKAIS+SNAYNDQFRELVQ+GKDI+ AYWELV+KDIQDACKLFE IYDQTDGGDGYVSV
Sbjct: 116  FQKAISSSNAYNDQFRELVQSGKDIETAYWELVVKDIQDACKLFESIYDQTDGGDGYVSV 175

Query: 692  EVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFS 871
            EVSPRLADDT+GTVEAAKWLHKVV+R NVYIKIPATA CIPSIKEVISLGISVNVTLIFS
Sbjct: 176  EVSPRLADDTQGTVEAAKWLHKVVDRPNVYIKIPATAPCIPSIKEVISLGISVNVTLIFS 235

Query: 872  LSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXX 1051
            L+RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DKMLE IGTPEALDLRG  
Sbjct: 236  LTRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKA 295

Query: 1052 XXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPXXXXXXXXXXXXXXXX 1231
                           FSGPRWEALVKKGAKKQRLLWASTSVKNP                
Sbjct: 296  AVAQAALAYKLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP------AYPDTLYVAP 349

Query: 1232 XXXXXXXXXXXXXXXXAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEG 1411
                            AF+DHG V+RTIDSNVSEAEGIY+ALEKLGIDW  VG+QLE+EG
Sbjct: 350  LIGPDTVSTMPDQALQAFVDHGIVARTIDSNVSEAEGIYNALEKLGIDWGYVGNQLEVEG 409

Query: 1412 VDSFKKSFESLLVTLAEKASSLNLVSL 1492
            VDSFKKSF+SLL TL EKA+SL LVSL
Sbjct: 410  VDSFKKSFDSLLDTLQEKANSLKLVSL 436


>ref|XP_002297881.1| predicted protein [Populus trichocarpa] gi|222845139|gb|EEE82686.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  582 bits (1501), Expect = e-164
 Identities = 316/447 (70%), Positives = 345/447 (77%), Gaps = 6/447 (1%)
 Frame = +2

Query: 167  MSSISKLTNPIFAAKL-----NISEPKPIICFQTRSLFHXXXXXXXXXXXITTNCVP-RT 328
            M++ISKL+NP  AA L     + S P+  + F T++ F              TN  P RT
Sbjct: 1    MATISKLSNPSPAASLPAPSSSSSLPRVFLGFNTKTSFSKVASSSSGLSL--TNTQPWRT 58

Query: 329  SLTVKCSKVDGNGIQEKKTSLHDLYELEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPA 508
            S  V+CS+  GN    K+T+LHDLYE EGQSPWYDNLCRPVTDL+PLI SGVRGVTSNPA
Sbjct: 59   SFVVRCSQSSGNVSPIKRTTLHDLYEREGQSPWYDNLCRPVTDLIPLIESGVRGVTSNPA 118

Query: 509  IFQKAISTSNAYNDQFRELVQAGKDIQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVS 688
            IFQKAIS+SNAYNDQFRELVQAGKDI+ AYWELV+KDIQDACKLFE IYDQTDGGDGYVS
Sbjct: 119  IFQKAISSSNAYNDQFRELVQAGKDIETAYWELVVKDIQDACKLFEPIYDQTDGGDGYVS 178

Query: 689  VEVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIF 868
            VEVSPRLADDT+GTVEAAKWLHKVV+R NVYIKIPATA CIPSIKEVISLGISVNVTLIF
Sbjct: 179  VEVSPRLADDTQGTVEAAKWLHKVVDRPNVYIKIPATAPCIPSIKEVISLGISVNVTLIF 238

Query: 869  SLSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGX 1048
            SL+RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DKMLE IGTPEALDLRG 
Sbjct: 239  SLTRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGK 298

Query: 1049 XXXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPXXXXXXXXXXXXXXX 1228
                            FSGPRWEALVKKGAKKQRLLWASTSVKNP               
Sbjct: 299  AAVAQAGLAYKLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP------AYPDTLYVA 352

Query: 1229 XXXXXXXXXXXXXXXXXAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEME 1408
                             AF+DHG+V+RTIDSNVSEAEGIY+ALEKLGIDW  VG QLE+E
Sbjct: 353  PLIGPDTVSTMPDQALQAFVDHGSVARTIDSNVSEAEGIYNALEKLGIDWGYVGDQLEVE 412

Query: 1409 GVDSFKKSFESLLVTLAEKASSLNLVS 1489
            GVDSFKKSF+SLL TL EKA+SL LVS
Sbjct: 413  GVDSFKKSFDSLLDTLQEKANSLKLVS 439


>ref|XP_002271514.1| PREDICTED: transaldolase isoform 1 [Vitis vinifera]
            gi|296085535|emb|CBI29267.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  579 bits (1492), Expect = e-163
 Identities = 311/450 (69%), Positives = 347/450 (77%), Gaps = 8/450 (1%)
 Frame = +2

Query: 167  MSSISKLTNPIFAAKLNIS--------EPKPIICFQTRSLFHXXXXXXXXXXXITTNCVP 322
            M+SISKL +P   +  ++S        +PK +I F +R +F+              N V 
Sbjct: 1    MASISKLVSPSPVSSYSVSGSLKSRSLQPKCLIDFHSRDVFNARVSSSRLS---VRNDVV 57

Query: 323  RTSLTVKCSKVDGNGIQEKKTSLHDLYELEGQSPWYDNLCRPVTDLLPLIASGVRGVTSN 502
            R SL V+CS+++GNG Q K+T+LHDLYE  GQSPWYDNLCRPVTDLLPLIASGVRGVTSN
Sbjct: 58   RGSLIVRCSQLEGNGSQIKRTTLHDLYEQGGQSPWYDNLCRPVTDLLPLIASGVRGVTSN 117

Query: 503  PAIFQKAISTSNAYNDQFRELVQAGKDIQDAYWELVIKDIQDACKLFEQIYDQTDGGDGY 682
            PAIFQKAIS+SNAYN+QFRELV AGKDI+ AYWELV+KDIQDAC+LFE IYD+TDGGDGY
Sbjct: 118  PAIFQKAISSSNAYNEQFRELVLAGKDIESAYWELVVKDIQDACRLFEPIYDETDGGDGY 177

Query: 683  VSVEVSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTL 862
            VSVEVSP+LADDT GTVEAAKWL+KVV+R NVYIKIPATA C+PSIKEVISLGISVNVTL
Sbjct: 178  VSVEVSPKLADDTVGTVEAAKWLYKVVDRPNVYIKIPATAPCVPSIKEVISLGISVNVTL 237

Query: 863  IFSLSRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLR 1042
            IFSL RYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTL+DK+LE IGTPEALDLR
Sbjct: 238  IFSLPRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKLLEKIGTPEALDLR 297

Query: 1043 GXXXXXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPXXXXXXXXXXXXX 1222
            G                 FSGPRWEALVKKGAKKQRLLWASTSVKNP             
Sbjct: 298  GKAAVAQAALAYQLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP------AYPDTLY 351

Query: 1223 XXXXXXXXXXXXXXXXXXXAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLE 1402
                               AF+DHG VSRTIDSNVSEAEGIYSALEKLGIDW  VGSQLE
Sbjct: 352  VSPLIGPDTVSTMPDQALQAFVDHGVVSRTIDSNVSEAEGIYSALEKLGIDWGYVGSQLE 411

Query: 1403 MEGVDSFKKSFESLLVTLAEKASSLNLVSL 1492
            +EGV+SFKKSF+SLL +L EKA+SL LVSL
Sbjct: 412  LEGVESFKKSFDSLLDSLQEKANSLKLVSL 441


>gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum]
          Length = 438

 Score =  578 bits (1490), Expect = e-162
 Identities = 311/446 (69%), Positives = 342/446 (76%), Gaps = 4/446 (0%)
 Frame = +2

Query: 167  MSSISKLTNPIFAA----KLNISEPKPIICFQTRSLFHXXXXXXXXXXXITTNCVPRTSL 334
            M+SI KL+NP F +      + S PK ++  +T +  H           I  +   R SL
Sbjct: 1    MASICKLSNPCFNSTSYGSRSSSTPKFVVHLRTSTFNHRLSAGSKLSLVINPSI--RASL 58

Query: 335  TVKCSKVDGNGIQEKKTSLHDLYELEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 514
             VKCS+ DGNG   K+T+LH LYE +GQSPWYDNLCRPVTDL+PLI SGVRGVTSNPAIF
Sbjct: 59   CVKCSQADGNGSSVKRTTLHHLYETQGQSPWYDNLCRPVTDLIPLIDSGVRGVTSNPAIF 118

Query: 515  QKAISTSNAYNDQFRELVQAGKDIQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSVE 694
            QKAISTSNAYNDQFRELVQAGKDI   YWELV+KDIQDACKLFE IYD+TDGGDGYVSVE
Sbjct: 119  QKAISTSNAYNDQFRELVQAGKDIDSVYWELVVKDIQDACKLFETIYDKTDGGDGYVSVE 178

Query: 695  VSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFSL 874
            VSPRLADDT+GTVEAAKWLHK V R NVYIKIPATA CIPSIKEVISLGISVNVTLIFSL
Sbjct: 179  VSPRLADDTEGTVEAAKWLHKKVERSNVYIKIPATAPCIPSIKEVISLGISVNVTLIFSL 238

Query: 875  SRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXXX 1054
            SRYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTLVDK+LE IGTPEALDLRG   
Sbjct: 239  SRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLVDKLLEKIGTPEALDLRGKXA 298

Query: 1055 XXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPXXXXXXXXXXXXXXXXX 1234
                          FSGPRWEALVKKGAKKQRLLWASTSVKNP                 
Sbjct: 299  NAQAALAYDLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP------AYPDTLYVDPL 352

Query: 1235 XXXXXXXXXXXXXXXAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGV 1414
                           AF+DHG+V+RTID+N+SEAEGIYSALEKLGIDW  VGSQLE+EGV
Sbjct: 353  IGPDTVSTMPDQALQAFIDHGSVARTIDANLSEAEGIYSALEKLGIDWVFVGSQLELEGV 412

Query: 1415 DSFKKSFESLLVTLAEKASSLNLVSL 1492
            DSFKKSF+SLL +L EKA++L LV+L
Sbjct: 413  DSFKKSFDSLLDSLQEKANTLKLVNL 438


>gb|AAB54016.1| transaldolase [Solanum tuberosum]
          Length = 438

 Score =  575 bits (1483), Expect = e-162
 Identities = 309/446 (69%), Positives = 340/446 (76%), Gaps = 4/446 (0%)
 Frame = +2

Query: 167  MSSISKLTNPIFAA----KLNISEPKPIICFQTRSLFHXXXXXXXXXXXITTNCVPRTSL 334
            M+SI KL+NP F +      + S PK ++  +T +  H           I  +   R SL
Sbjct: 1    MASICKLSNPCFNSTSYGSRSSSTPKFVVHLRTSTFNHRLSAGSKLSLVINPSI--RASL 58

Query: 335  TVKCSKVDGNGIQEKKTSLHDLYELEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 514
             VKCS+ DGNG   K+T+LH LYE +GQSPWYDNLC PVTDL+PLI SGVRGVTSNPAIF
Sbjct: 59   CVKCSQADGNGSSVKRTTLHHLYETQGQSPWYDNLCLPVTDLIPLIDSGVRGVTSNPAIF 118

Query: 515  QKAISTSNAYNDQFRELVQAGKDIQDAYWELVIKDIQDACKLFEQIYDQTDGGDGYVSVE 694
            QKAISTSNAYNDQFRELVQAGKDI   YWELV+KDIQDACKLFE IYD+TDGGDGYVSVE
Sbjct: 119  QKAISTSNAYNDQFRELVQAGKDIDSVYWELVVKDIQDACKLFETIYDKTDGGDGYVSVE 178

Query: 695  VSPRLADDTKGTVEAAKWLHKVVNRRNVYIKIPATAECIPSIKEVISLGISVNVTLIFSL 874
            VSPRLADDT+GTVEAAKWLHK V R NVYIKIPATA CIPSIKEVISLGISVNVTLIFSL
Sbjct: 179  VSPRLADDTEGTVEAAKWLHKKVERSNVYIKIPATAPCIPSIKEVISLGISVNVTLIFSL 238

Query: 875  SRYEAVVDAYLDGLEASGLSDLSKVTSVASFFVSRVDTLVDKMLEDIGTPEALDLRGXXX 1054
            SRYEAV+DAYLDGLEASGLSDLS+VTSVASFFVSRVDTLVDK+LE IGTPEALDLRG   
Sbjct: 239  SRYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLVDKLLEKIGTPEALDLRGKAA 298

Query: 1055 XXXXXXXXXXXXXXFSGPRWEALVKKGAKKQRLLWASTSVKNPXXXXXXXXXXXXXXXXX 1234
                          FSGPRWEALVKKGAKKQRLLWASTSVKNP                 
Sbjct: 299  NAQAALAYDLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNP------AYPDTLYVDPL 352

Query: 1235 XXXXXXXXXXXXXXXAFLDHGTVSRTIDSNVSEAEGIYSALEKLGIDWNEVGSQLEMEGV 1414
                           AF+DHG+V+RTID+N+SEAEGIYSALEKLGIDW  VGSQLE+EGV
Sbjct: 353  IGPDTVSTMPDQALQAFIDHGSVARTIDANLSEAEGIYSALEKLGIDWVFVGSQLELEGV 412

Query: 1415 DSFKKSFESLLVTLAEKASSLNLVSL 1492
            DSFKKSF+SLL +L EKA++L LV+L
Sbjct: 413  DSFKKSFDSLLDSLQEKANTLKLVNL 438


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