BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001354
         (3649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV87353.1| phytochrome A [Aquilegia formosa]                     1429   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1370   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1369   0.0  
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...  1355   0.0  
gb|AEK26583.1| phytochrome A [Populus tremula]                       1352   0.0  

>gb|ACV87353.1| phytochrome A [Aquilegia formosa]
          Length = 1130

 Score = 1429 bits (3700), Expect = 0.0
 Identities = 700/792 (88%), Positives = 747/792 (94%), Gaps = 1/792 (0%)
 Frame = -3

Query: 3563 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNASSVQQQPKSDKVTTAYLHQIQK 3384
            KHSARVIAQTTVDAKLHA+FEE+GSSFDYSR+V V+N+S+  QQ +SDKVTTAYLHQIQK
Sbjct: 17   KHSARVIAQTTVDAKLHAEFEETGSSFDYSRSVSVTNSSN--QQTRSDKVTTAYLHQIQK 74

Query: 3383 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3204
            GK IQPFGCLLALD+KTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDL+TI TSP
Sbjct: 75   GKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLKTILTSP 134

Query: 3203 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3024
            SASALQKAL F+DV+LLNPILVHCK+SGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 135  SASALQKALAFSDVTLLNPILVHCKSSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 194

Query: 3023 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2844
            ALQSYKLAAKAI RLQSLP GS++RLCD VV+EV++LTGYDRVM YKFH+DDHGEVVSE 
Sbjct: 195  ALQSYKLAAKAIARLQSLPSGSIDRLCDTVVEEVFQLTGYDRVMVYKFHDDDHGEVVSET 254

Query: 2843 TKAGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2664
            TK GL PYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKL F+LTLCGS 
Sbjct: 255  TKEGLPPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLPFELTLCGST 314

Query: 2663 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTR-PSQPQKRKRLWGLVVCHNPTP 2487
            LRAPHSCHLQYMENMDSIASLVMAVV+NDGDE++ +    SQ QKRKRLWGLVVCHN TP
Sbjct: 315  LRAPHSCHLQYMENMDSIASLVMAVVINDGDEEEGTVEGASQSQKRKRLWGLVVCHNTTP 374

Query: 2486 RFVPFPLRYACEFLIQVFAIHVGKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQS 2307
            RFVPFPLRYACEFLIQVFAIHV KEFELENQILEKNILRTQTLLCDMLMRN P+GIVSQS
Sbjct: 375  RFVPFPLRYACEFLIQVFAIHVNKEFELENQILEKNILRTQTLLCDMLMRNAPIGIVSQS 434

Query: 2306 PNIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDCHMDSTGLSSDSLYDAGFP 2127
            PNIMDLVKCDGAALLY+NKIWRLG SP+E  IRDIASWLS+ HMDSTGLS+DSLYDAGFP
Sbjct: 435  PNIMDLVKCDGAALLYQNKIWRLGLSPSESHIRDIASWLSEYHMDSTGLSTDSLYDAGFP 494

Query: 2126 GALSIADTVCGMAAVRINSKDMLFWFRSHAAAEVRWGGAKHDPGEKDDGRKMHPRSSFKA 1947
            GALSI DTVCGMAAVRINSKDMLFWFRSH A E+RWGGAKH+PGEKDDGRKMHPRSSFKA
Sbjct: 495  GALSIGDTVCGMAAVRINSKDMLFWFRSHTAGEIRWGGAKHEPGEKDDGRKMHPRSSFKA 554

Query: 1946 FLEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELE 1767
            FLEVVKTRS PWKD+EMDAIHSLQLILR+ FKDIET DGNT  IHSQLD LKI+GMEELE
Sbjct: 555  FLEVVKTRSFPWKDFEMDAIHSLQLILRNTFKDIETADGNTNVIHSQLDKLKIDGMEELE 614

Query: 1766 AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGYSVDT 1587
            AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVD+VIGKHFLKLVE  S +T
Sbjct: 615  AVTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDQVIGKHFLKLVEESSAET 674

Query: 1586 VKRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDIT 1407
            VKRMLHLAL+GKEEQNVHFEMKTHGS+K+ GPVSLVVNACASRDLQENVVGVCFVA D+T
Sbjct: 675  VKRMLHLALLGKEEQNVHFEMKTHGSKKDSGPVSLVVNACASRDLQENVVGVCFVAHDLT 734

Query: 1406 SQKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDK 1227
            +QKMVMDKFTRIEGDYKAILQNPSPL PPIFG+DEFGWCCEWNPAMTKLSGW+R+E+MDK
Sbjct: 735  NQKMVMDKFTRIEGDYKAILQNPSPLYPPIFGTDEFGWCCEWNPAMTKLSGWDRAEVMDK 794

Query: 1226 MLLGEIFGTHMA 1191
            MLLGEIFGT+M+
Sbjct: 795  MLLGEIFGTNMS 806



 Score =  456 bits (1172), Expect = e-125
 Identities = 231/285 (81%), Positives = 256/285 (89%)
 Frame = -2

Query: 1062 FGFFGRNGKYVDCLLSVSKKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSK 883
            FGFFGRNG YVDCLLSV+KKVDGEG VTGVFCFL  VS+ELQQALHVQRLSEQ+A++KSK
Sbjct: 837  FGFFGRNGNYVDCLLSVTKKVDGEGVVTGVFCFLHTVSQELQQALHVQRLSEQSALQKSK 896

Query: 882  ALAYMKRQIRNPLSGIIFSRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMD 703
             L YMKRQIRNPLSGIIFS KM+  TDL EEQKQLLHTSMHCQRQLHKVL+DTDLE IMD
Sbjct: 897  GLTYMKRQIRNPLSGIIFSGKMMGGTDLDEEQKQLLHTSMHCQRQLHKVLEDTDLERIMD 956

Query: 702  GYVDLEMVEFTLQEVLFTSISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLAD 523
            GYVD +M+EFTL+EVL T ISQVKI+SD ++LR + DSL++ MTE  YGD LRLQQVLAD
Sbjct: 957  GYVDSKMIEFTLREVLITCISQVKIESDRRSLRFTNDSLEDFMTETLYGDSLRLQQVLAD 1016

Query: 522  FILVSVKFTPTGGQLGISASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSD 343
            F+LVSVKFTP GGQ+GISASLTR+RLGESVHLA L+LRLTHSGGGI EELLS MFESDS+
Sbjct: 1017 FMLVSVKFTPKGGQIGISASLTRNRLGESVHLAHLELRLTHSGGGIPEELLSHMFESDSE 1076

Query: 342  TSEDGISLLVCRKLLKLMNGDVQYLREAGKSSFIISVEFASAPKA 208
             SE+G+SLLVCRKLLK+MNGDVQYLREAGKSSFII VE ASA K+
Sbjct: 1077 ASEEGVSLLVCRKLLKVMNGDVQYLREAGKSSFIIPVELASASKS 1121


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1370 bits (3547), Expect = 0.0
 Identities = 666/791 (84%), Positives = 726/791 (91%)
 Frame = -3

Query: 3563 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNASSVQQQPKSDKVTTAYLHQIQK 3384
            KHSAR+IAQTTVDAKLHA FEESGSSFDYS +V  + A    QQP+SDKVTTAYLH IQK
Sbjct: 17   KHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQK 75

Query: 3383 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3204
            GK IQPFG LLALDDKT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTD+RTIF+ P
Sbjct: 76   GKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGP 135

Query: 3203 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3024
            SASAL KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 136  SASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAG 195

Query: 3023 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2844
            ALQSYKLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+
Sbjct: 196  ALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 255

Query: 2843 TKAGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2664
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS 
Sbjct: 256  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGST 315

Query: 2663 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNPTPR 2484
            LRAPHSCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+ TPR
Sbjct: 316  LRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPR 375

Query: 2483 FVPFPLRYACEFLIQVFAIHVGKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2304
            FVPFPLRYACEFL QVFAIHV KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSP
Sbjct: 376  FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSP 435

Query: 2303 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDCHMDSTGLSSDSLYDAGFPG 2124
            N+MDLVKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+ HMDSTGLS+DSLYDAG+PG
Sbjct: 436  NVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPG 495

Query: 2123 ALSIADTVCGMAAVRINSKDMLFWFRSHAAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 1944
            AL++ D VCGMAAV+I SKD LFWFRSH AAEVRWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 496  ALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 555

Query: 1943 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1764
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L+DLKI GM+ELEA
Sbjct: 556  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEA 615

Query: 1763 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGYSVDTV 1584
            VT+EMVRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE  S DTV
Sbjct: 616  VTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTV 675

Query: 1583 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1404
            K+MLHLAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITS
Sbjct: 676  KKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDENVVGVCFVAQDITS 735

Query: 1403 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1224
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKM
Sbjct: 736  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKM 795

Query: 1223 LLGEIFGTHMA 1191
            LLGE+FGTHMA
Sbjct: 796  LLGEVFGTHMA 806



 Score =  411 bits (1057), Expect = e-112
 Identities = 203/284 (71%), Positives = 250/284 (88%)
 Frame = -2

Query: 1062 FGFFGRNGKYVDCLLSVSKKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSK 883
            FGFF ++GKYV+CLLSVSKK+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ K
Sbjct: 837  FGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLK 896

Query: 882  ALAYMKRQIRNPLSGIIFSRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMD 703
            ALAY+KRQI+NPLSGIIFSRKM+E+TDLGEEQ+Q+LHTS  CQRQL K+LDD DL++I++
Sbjct: 897  ALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIE 956

Query: 702  GYVDLEMVEFTLQEVLFTSISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLAD 523
            GY+DLEMVEFTL+EVL  SISQV IKS+ K ++I  D+ + IMTE  YGD LRLQQVLAD
Sbjct: 957  GYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLAD 1016

Query: 522  FILVSVKFTPTGGQLGISASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSD 343
            F+L+SV FTP GGQL ++ASL +DRLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D
Sbjct: 1017 FLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGD 1076

Query: 342  TSEDGISLLVCRKLLKLMNGDVQYLREAGKSSFIISVEFASAPK 211
             SE+GISLL+ RKL+KLMNGDVQYLREAGKS+FIIS+E A+A K
Sbjct: 1077 ASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1369 bits (3543), Expect = 0.0
 Identities = 665/791 (84%), Positives = 726/791 (91%)
 Frame = -3

Query: 3563 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNASSVQQQPKSDKVTTAYLHQIQK 3384
            KHSAR+IAQTTVDAKLHA FEESGSSFDYS +V  + A    QQP+SDKVTTAYLH IQK
Sbjct: 17   KHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGG-DQQPRSDKVTTAYLHHIQK 75

Query: 3383 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3204
            GK IQPFG LLALD+KT KVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTD+RTIF+ P
Sbjct: 76   GKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGP 135

Query: 3203 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3024
            SASAL KALGF +VSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 136  SASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAG 195

Query: 3023 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2844
            ALQSYKLAAKAITRLQSLP GS+ERLCD +VQEV+ELTGYDRVMAYKFH+DDHGEVVSE+
Sbjct: 196  ALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEI 255

Query: 2843 TKAGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2664
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMICDCRAKH++VLQDEKL FDLTLCGS 
Sbjct: 256  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGST 315

Query: 2663 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNPTPR 2484
            LRAPHSCH+QYMENM+SIASLVMAVVVNDGDE+ ES+   QPQKRKRLWGLVVCH+ TPR
Sbjct: 316  LRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPR 375

Query: 2483 FVPFPLRYACEFLIQVFAIHVGKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2304
            FVPFPLRYACEFL QVFAIHV KE ELE+QILEKNILRTQTLLCDMLMR+ PLGIVSQSP
Sbjct: 376  FVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSP 435

Query: 2303 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDCHMDSTGLSSDSLYDAGFPG 2124
            N+MDLVKCDGAALLYKNK+WRLG +P++ Q+ DI SWLS+ HMDSTGLS+DSLYDAG+PG
Sbjct: 436  NVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPG 495

Query: 2123 ALSIADTVCGMAAVRINSKDMLFWFRSHAAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 1944
            AL++ D VCGMAAV+I SKD LFWFRSH AAEVRWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 496  ALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAF 555

Query: 1943 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1764
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD E  D NT AIH++L+DLKI GM+ELEA
Sbjct: 556  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEA 615

Query: 1763 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGYSVDTV 1584
            VT+EMVRLIETA+VPILAVD++GL+NGWNTKI+ELT LPVD+ IG H L LVE  S DTV
Sbjct: 616  VTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTV 675

Query: 1583 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1404
            K+MLHLAL G+EEQNV FE+KTHGS+++ GP+SLVVNACASRDL ENVVGVCFVAQDITS
Sbjct: 676  KKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITS 735

Query: 1403 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1224
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KLSGW R E+MDKM
Sbjct: 736  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKM 795

Query: 1223 LLGEIFGTHMA 1191
            LLGE+FGTHMA
Sbjct: 796  LLGEVFGTHMA 806



 Score =  411 bits (1057), Expect = e-112
 Identities = 203/284 (71%), Positives = 250/284 (88%)
 Frame = -2

Query: 1062 FGFFGRNGKYVDCLLSVSKKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSK 883
            FGFF ++GKYV+CLLSVSKK+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ K
Sbjct: 837  FGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLK 896

Query: 882  ALAYMKRQIRNPLSGIIFSRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMD 703
            ALAY+KRQI+NPLSGIIFSRKM+E+TDLGEEQ+Q+LHTS  CQRQL K+LDD DL++I++
Sbjct: 897  ALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIE 956

Query: 702  GYVDLEMVEFTLQEVLFTSISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLAD 523
            GY+DLEMVEFTL+EVL  SISQV IKS+ K ++I  D+ + IMTE  YGD LRLQQVLAD
Sbjct: 957  GYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLAD 1016

Query: 522  FILVSVKFTPTGGQLGISASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSD 343
            F+L+SV FTP GGQL ++ASL +DRLGESVHL  L+LR+TH+G G+ E+LL++MF ++ D
Sbjct: 1017 FLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGD 1076

Query: 342  TSEDGISLLVCRKLLKLMNGDVQYLREAGKSSFIISVEFASAPK 211
             SE+GISLL+ RKL+KLMNGDVQYLREAGKS+FIIS+E A+A K
Sbjct: 1077 ASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARK 1120


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score = 1355 bits (3506), Expect = 0.0
 Identities = 656/791 (82%), Positives = 721/791 (91%)
 Frame = -3

Query: 3563 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNASSVQQQPKSDKVTTAYLHQIQK 3384
            +HSAR+I+QT VDAKLHA FEESGSSFDYS +V V++++ +   P+SDKVTTAYLH IQK
Sbjct: 17   RHSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQK 76

Query: 3383 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3204
            GK IQPFGCLLALD+KT KVIAYSENAPEMLTMVSHAVPSVG+HPVLGIGTD+RTIFT+P
Sbjct: 77   GKLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAP 136

Query: 3203 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3024
            SASALQKALGF DVSLLNPILVHCKTSGKPFYAI HRVTGS IIDFEPVKPYE+PMTAAG
Sbjct: 137  SASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAG 196

Query: 3023 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2844
            ALQSYKLAAKAI+RLQSLP GSMERLCD +VQEV+ELTGYDRVM YKFH+DDHGEV+SEV
Sbjct: 197  ALQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEV 256

Query: 2843 TKAGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2664
            TK GLEPYLGLHYPATDIPQAARFLFMKNK+RMI DCRAKHV+VLQDEKL  +LTLCGS 
Sbjct: 257  TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGST 316

Query: 2663 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNPTPR 2484
            LRAPHSCHLQYMENMDS+ASLVMAVVVN+GDEDD+S    QPQKRKRLWGLVVCHN TPR
Sbjct: 317  LRAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPR 376

Query: 2483 FVPFPLRYACEFLIQVFAIHVGKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2304
            FVPFPLRYACEFL QVFAIHV KE ELENQI+EKNILRTQTLLCDML+R+ PLGI++QSP
Sbjct: 377  FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLLRDAPLGILTQSP 436

Query: 2303 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDCHMDSTGLSSDSLYDAGFPG 2124
            NI DLVKCDGAALLYKNKIWRLG +P+++QIRDIA WLS+ HMDSTGLS+DSLYDAG+  
Sbjct: 437  NITDLVKCDGAALLYKNKIWRLGVTPSDLQIRDIAVWLSEYHMDSTGLSTDSLYDAGYSA 496

Query: 2123 ALSIADTVCGMAAVRINSKDMLFWFRSHAAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 1944
            ALS+ D VCGMAAVRI SKDMLFWFR+  AAE+RWGGAKH+PGEKDDGRKMHPRSSFKAF
Sbjct: 497  ALSLEDVVCGMAAVRITSKDMLFWFRAPTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAF 556

Query: 1943 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1764
            LEVVKTRS PWKDYEMDAIHSLQLILR+AFKD ET D + KAIHS+L DLKI GM+ELEA
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAETMDADAKAIHSRLSDLKIEGMQELEA 616

Query: 1763 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGYSVDTV 1584
            VT+EMVRLIETATVPILAVD++GL+NGWNTKIAELTGLPVD+ IGKH L LVE  S+D V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLPVDKAIGKHLLTLVEDGSIDLV 676

Query: 1583 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1404
            K ML  AL GKEEQN+ FE+KTHGS+ E GP+SLVVNACASRD+ ENVVGVCFVAQDIT 
Sbjct: 677  KNMLFSALQGKEEQNIQFEIKTHGSKVESGPISLVVNACASRDISENVVGVCFVAQDITG 736

Query: 1403 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1224
            QK VMDKFTRIEGDYKAI+QNP+PLIPPIFG+DEFGWC EWNPAM KL+GW+R E+MDKM
Sbjct: 737  QKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMAKLTGWKREEVMDKM 796

Query: 1223 LLGEIFGTHMA 1191
            LLGE+FG + A
Sbjct: 797  LLGEVFGINRA 807



 Score =  392 bits (1008), Expect = e-106
 Identities = 194/286 (67%), Positives = 239/286 (83%)
 Frame = -2

Query: 1062 FGFFGRNGKYVDCLLSVSKKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSK 883
            F FF RN KYV+CLL VSKK+D EGAVTGVFCFLQ+ S+ELQQALH+QRLSEQTA+K+ K
Sbjct: 838  FSFFARNKKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLK 897

Query: 882  ALAYMKRQIRNPLSGIIFSRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMD 703
             LAY+KRQI+NPLSGI+FSRK++E T+L  EQKQLLHTS  CQRQL K+LDD+D+++I++
Sbjct: 898  TLAYIKRQIQNPLSGIMFSRKLMEITELDAEQKQLLHTSAQCQRQLSKILDDSDIDSIVE 957

Query: 702  GYVDLEMVEFTLQEVLFTSISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLAD 523
            GY+DLEMVEFTL EVL  +ISQV IKS  K +RI  D+ + IMTE  YGD +RLQQVLAD
Sbjct: 958  GYLDLEMVEFTLHEVLIAAISQVTIKSKGKGIRIVNDAAEVIMTETLYGDSIRLQQVLAD 1017

Query: 522  FILVSVKFTPTGGQLGISASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSD 343
            F+  SV FTP GGQL I+A  T+D+LG+SVHL  L+LR+TH+GGGI E LL++MF SD D
Sbjct: 1018 FLAASVDFTPPGGQLTIAAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLLNQMFGSDGD 1077

Query: 342  TSEDGISLLVCRKLLKLMNGDVQYLREAGKSSFIISVEFASAPKAQ 205
             S++G+SL + RKL+KLMNGDVQYLREAGKSSFI++VE A+  K+Q
Sbjct: 1078 VSDEGVSLFISRKLVKLMNGDVQYLREAGKSSFIVTVELAAGRKSQ 1123


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score = 1352 bits (3498), Expect = 0.0
 Identities = 653/791 (82%), Positives = 722/791 (91%)
 Frame = -3

Query: 3563 KHSARVIAQTTVDAKLHAQFEESGSSFDYSRTVCVSNASSVQQQPKSDKVTTAYLHQIQK 3384
            +HSAR+IAQTTVDAKLHA FEESGSSFDYS +V V+++    Q P+SDKVTTAYLH IQK
Sbjct: 17   RHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQK 76

Query: 3383 GKHIQPFGCLLALDDKTCKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDLRTIFTSP 3204
            GK IQPFGCLLALD+KT +V+AYSENAPE+LTMVSHAVPSVGEHPVLGIGTD+RTIFT+P
Sbjct: 77   GKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAP 136

Query: 3203 SASALQKALGFNDVSLLNPILVHCKTSGKPFYAIAHRVTGSLIIDFEPVKPYEIPMTAAG 3024
            SASALQKA+GF DVSLLNPILVHCKTSGKPFYAI HRVTGSLIIDFEPVKPYE+PMTAAG
Sbjct: 137  SASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196

Query: 3023 ALQSYKLAAKAITRLQSLPGGSMERLCDAVVQEVYELTGYDRVMAYKFHEDDHGEVVSEV 2844
            ALQSYKLAAKAITRLQSLP GSMERLCD +VQEV+ELTGYDR MAYKFH+DDHGEVVSEV
Sbjct: 197  ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEV 256

Query: 2843 TKAGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCRAKHVRVLQDEKLSFDLTLCGSA 2664
            TK G+EPYLGLHYPATDIPQA+RFLFMKNK+RMI DC AKHV+VLQDEKL FDLTLCGS 
Sbjct: 257  TKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGST 316

Query: 2663 LRAPHSCHLQYMENMDSIASLVMAVVVNDGDEDDESTRPSQPQKRKRLWGLVVCHNPTPR 2484
            LRAPHSCHLQYMENM+SIASLVMAVVVNDGDED ++   + PQKRKRLWGLVVCHN +PR
Sbjct: 317  LRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPR 376

Query: 2483 FVPFPLRYACEFLIQVFAIHVGKEFELENQILEKNILRTQTLLCDMLMRNVPLGIVSQSP 2304
            FVPFPLRYACEFL QVFAIHV KE ELENQI+EKNILRTQTLLCDMLMR+ PLGIV+QSP
Sbjct: 377  FVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSP 436

Query: 2303 NIMDLVKCDGAALLYKNKIWRLGSSPNEIQIRDIASWLSDCHMDSTGLSSDSLYDAGFPG 2124
            NIMDLVKCDGA L Y+NKIWRLG +P+++Q++DIA WLS+ HMDSTGLS+DSLYDAG+PG
Sbjct: 437  NIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPG 496

Query: 2123 ALSIADTVCGMAAVRINSKDMLFWFRSHAAAEVRWGGAKHDPGEKDDGRKMHPRSSFKAF 1944
            AL++ D VCGMAAVRI SKDMLFWFRS  AAE+RWGGAKH+PGEKDDGR+MHPRSSFKAF
Sbjct: 497  ALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAF 556

Query: 1943 LEVVKTRSAPWKDYEMDAIHSLQLILRSAFKDIETTDGNTKAIHSQLDDLKINGMEELEA 1764
            LEVVKTRS PWKDYEMDAIHSLQLILR+ FKDIET D +TK IH++L DLKI GM+ELEA
Sbjct: 557  LEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEA 616

Query: 1763 VTNEMVRLIETATVPILAVDINGLINGWNTKIAELTGLPVDEVIGKHFLKLVEGYSVDTV 1584
            VT+EMVRLIETATVPILAVD++GL+NGWNTKI+ELTGL VD+ IGKH L LVE  SVD V
Sbjct: 617  VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIV 676

Query: 1583 KRMLHLALIGKEEQNVHFEMKTHGSRKEIGPVSLVVNACASRDLQENVVGVCFVAQDITS 1404
            KRML LAL GKEEQN+ FE+KTHGS+ E GP+ LVVNACASRDL ENVVGVCFV QDIT 
Sbjct: 677  KRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITG 736

Query: 1403 QKMVMDKFTRIEGDYKAILQNPSPLIPPIFGSDEFGWCCEWNPAMTKLSGWERSEMMDKM 1224
            QKMVMDKFTRIEGDYKAI+QN +PLIPPIFG+DEFGWC EWNPAMT L+GW+R E++DKM
Sbjct: 737  QKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKM 796

Query: 1223 LLGEIFGTHMA 1191
            LLGE+FG +MA
Sbjct: 797  LLGEVFGLNMA 807



 Score =  365 bits (938), Expect = 4e-98
 Identities = 181/272 (66%), Positives = 228/272 (83%)
 Frame = -2

Query: 1062 FGFFGRNGKYVDCLLSVSKKVDGEGAVTGVFCFLQIVSRELQQALHVQRLSEQTAVKKSK 883
            FGFF R GKYV+CLL VSKK+D EGAVTGVFCFLQ+ S+ELQQALHVQRLSEQTA+K+ K
Sbjct: 838  FGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLK 897

Query: 882  ALAYMKRQIRNPLSGIIFSRKMLEETDLGEEQKQLLHTSMHCQRQLHKVLDDTDLENIMD 703
            ALAY+K+QI NPLSGIIFS KM+E T+LG EQK+LLHTS  CQ QL K+LDD+DL++I++
Sbjct: 898  ALAYLKKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIE 957

Query: 702  GYVDLEMVEFTLQEVLFTSISQVKIKSDEKNLRISCDSLDEIMTEIFYGDRLRLQQVLAD 523
            GY+DLEMVEFTL+EVL  + SQV +KS+EK +RI  D+ +E+M E  YGD +RLQQVLAD
Sbjct: 958  GYLDLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEEMMAETLYGDSIRLQQVLAD 1017

Query: 522  FILVSVKFTPTGGQLGISASLTRDRLGESVHLARLKLRLTHSGGGIAEELLSEMFESDSD 343
            F+L+SV FTP+GG L +SAS ++D+LG+SV+L  L+LR+ H G GI E LL +M+  D+ 
Sbjct: 1018 FLLMSVNFTPSGGLLTVSASFSKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMYGEDTG 1077

Query: 342  TSEDGISLLVCRKLLKLMNGDVQYLREAGKSS 247
             S +GISL++ RKL+KLMNGDV+Y+REAGKSS
Sbjct: 1078 ASVEGISLVISRKLVKLMNGDVRYMREAGKSS 1109