BLASTX nr result

ID: Coptis23_contig00001350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001350
         (1803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisom...   444   e-158
emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]   444   e-155
ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|2...   419   e-147
ref|XP_002528799.1| ATP-dependent protease La, putative [Ricinus...   422   e-147
ref|XP_003578503.1| PREDICTED: lon protease homolog 2, peroxisom...   419   e-146

>ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisomal [Vitis vinifera]
           gi|297742183|emb|CBI33970.3| unnamed protein product
           [Vitis vinifera]
          Length = 888

 Score =  444 bits (1142), Expect(2) = e-158
 Identities = 234/267 (87%), Positives = 244/267 (91%), Gaps = 5/267 (1%)
 Frame = -1

Query: 786 GERSAKIPVSTS-----DGKNQQELIQWHTRGVAARALRLSRGVEKPSGRVTYIVVLEGL 622
           GERS+KI V+TS     DGKNQQE+I WHTRGVAARAL LSRGVEKPSGRVTYIVVLEGL
Sbjct: 80  GERSSKIQVATSESNKPDGKNQQEVIHWHTRGVAARALHLSRGVEKPSGRVTYIVVLEGL 139

Query: 621 CRFSVQELSVRGTYYTARVARLDMTKTEMEHAEQDPDLIALSRQFKATAMELISVLEQKQ 442
           CRFSVQELS RGTYYTAR++ LDM KTEME  EQDP+ IALSRQFKATAMELISVLEQKQ
Sbjct: 140 CRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPEFIALSRQFKATAMELISVLEQKQ 199

Query: 441 KTVGRTKVLLETVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLLKATELVDRHLQSI 262
           KT GRTKVLLETVPVH+LADIFVASFEISFEEQLSMLDSVDLKVRL KATELVDRHLQSI
Sbjct: 200 KTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDRHLQSI 259

Query: 261 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGXXXXXXXDVAALERKMQSAGMPPNV 82
           RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG       DVAALERKMQSAGMPPN+
Sbjct: 260 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPPNI 319

Query: 81  WKHAQRELRRLRKMQPQQPGYSSSRVY 1
           WKHAQRELRRL+KMQPQQPGY+SSRVY
Sbjct: 320 WKHAQRELRRLKKMQPQQPGYNSSRVY 346



 Score =  143 bits (360), Expect(2) = e-158
 Identities = 72/83 (86%), Positives = 76/83 (91%)
 Frame = -2

Query: 1115 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGVLPVRD 936
            MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIG+LPVRD
Sbjct: 1    MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGILPVRD 60

Query: 935  AAETASVSPMLSPGVAGESGERS 867
             AE  +V P+LS GV  +SGERS
Sbjct: 61   TAEMTTVGPLLSQGVGTDSGERS 83


>emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]
          Length = 904

 Score =  444 bits (1142), Expect(2) = e-155
 Identities = 234/267 (87%), Positives = 244/267 (91%), Gaps = 5/267 (1%)
 Frame = -1

Query: 786 GERSAKIPVSTS-----DGKNQQELIQWHTRGVAARALRLSRGVEKPSGRVTYIVVLEGL 622
           GERS+KI V+TS     DGKNQQE+I WHTRGVAARAL LSRGVEKPSGRVTYIVVLEGL
Sbjct: 96  GERSSKIQVATSESNKPDGKNQQEVIHWHTRGVAARALHLSRGVEKPSGRVTYIVVLEGL 155

Query: 621 CRFSVQELSVRGTYYTARVARLDMTKTEMEHAEQDPDLIALSRQFKATAMELISVLEQKQ 442
           CRFSVQELS RGTYYTAR++ LDM KTEME  EQDP+ IALSRQFKATAMELISVLEQKQ
Sbjct: 156 CRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPEFIALSRQFKATAMELISVLEQKQ 215

Query: 441 KTVGRTKVLLETVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLLKATELVDRHLQSI 262
           KT GRTKVLLETVPVH+LADIFVASFEISFEEQLSMLDSVDLKVRL KATELVDRHLQSI
Sbjct: 216 KTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDRHLQSI 275

Query: 261 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGXXXXXXXDVAALERKMQSAGMPPNV 82
           RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG       DVAALERKMQSAGMPPN+
Sbjct: 276 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPPNI 335

Query: 81  WKHAQRELRRLRKMQPQQPGYSSSRVY 1
           WKHAQRELRRL+KMQPQQPGY+SSRVY
Sbjct: 336 WKHAQRELRRLKKMQPQQPGYNSSRVY 362



 Score =  132 bits (332), Expect(2) = e-155
 Identities = 72/99 (72%), Positives = 76/99 (76%), Gaps = 16/99 (16%)
 Frame = -2

Query: 1115 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGVLPVRD 936
            MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIG+LPVRD
Sbjct: 1    MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGILPVRD 60

Query: 935  AAETASVSPM----------------LSPGVAGESGERS 867
             AE  +V P+                LS GV  +SGERS
Sbjct: 61   TAEMTTVXPLLSQVSFIACFEGNAFYLSAGVGTDSGERS 99


>ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|222870300|gb|EEF07431.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  419 bits (1078), Expect(2) = e-147
 Identities = 221/267 (82%), Positives = 235/267 (88%), Gaps = 6/267 (2%)
 Frame = -1

Query: 783 ERSAKIPVSTS------DGKNQQELIQWHTRGVAARALRLSRGVEKPSGRVTYIVVLEGL 622
           ERS+K   STS      DGK+QQE+  WH RGVAARAL LSRGVEKPSGRVTYIVVLEGL
Sbjct: 85  ERSSKTQASTSSDNVKLDGKHQQEVFHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 144

Query: 621 CRFSVQELSVRGTYYTARVARLDMTKTEMEHAEQDPDLIALSRQFKATAMELISVLEQKQ 442
           CRF++ EL  RGTYYTAR++ L+MT  E+E  +QDPD IALSRQFKATAMELISVLEQKQ
Sbjct: 145 CRFNLNELITRGTYYTARISPLEMTNAELEQVDQDPDFIALSRQFKATAMELISVLEQKQ 204

Query: 441 KTVGRTKVLLETVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLLKATELVDRHLQSI 262
           KT GRTKVLLETVPVH+LADIFVASFEISFEEQLSMLDSVDLKVRL KATELVDRHLQSI
Sbjct: 205 KTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDRHLQSI 264

Query: 261 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGXXXXXXXDVAALERKMQSAGMPPNV 82
           RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG       DVAALERKMQSAGMP N+
Sbjct: 265 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPSNI 324

Query: 81  WKHAQRELRRLRKMQPQQPGYSSSRVY 1
           WKHAQRELRRL+KMQPQQPGY+SSRVY
Sbjct: 325 WKHAQRELRRLKKMQPQQPGYNSSRVY 351



 Score =  130 bits (326), Expect(2) = e-147
 Identities = 72/88 (81%), Positives = 75/88 (85%), Gaps = 5/88 (5%)
 Frame = -2

Query: 1115 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGVLPVRD 936
            MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIG+LPVRD
Sbjct: 1    MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGILPVRD 60

Query: 935  AA-----ETASVSPMLSPGVAGESGERS 867
            AA     ETAS   M+  GV  +S ERS
Sbjct: 61   AAAASSSETAS-GNMICLGVGSDSSERS 87


>ref|XP_002528799.1| ATP-dependent protease La, putative [Ricinus communis]
           gi|223531802|gb|EEF33621.1| ATP-dependent protease La,
           putative [Ricinus communis]
          Length = 890

 Score =  422 bits (1084), Expect(2) = e-147
 Identities = 220/268 (82%), Positives = 238/268 (88%), Gaps = 6/268 (2%)
 Frame = -1

Query: 786 GERSAKIPVSTSD------GKNQQELIQWHTRGVAARALRLSRGVEKPSGRVTYIVVLEG 625
           G  S KI V+ SD      GK+QQE+I+WH RGVAARAL LSRGVEKPSGRVTYIVVLEG
Sbjct: 81  GNDSGKIQVNNSDNNLKLDGKSQQEVIRWHNRGVAARALHLSRGVEKPSGRVTYIVVLEG 140

Query: 624 LCRFSVQELSVRGTYYTARVARLDMTKTEMEHAEQDPDLIALSRQFKATAMELISVLEQK 445
           LCRFSVQELS RG YYTAR++ L+MTK EME  EQDPD ++LSRQFKATAMELISVLEQK
Sbjct: 141 LCRFSVQELSKRGMYYTARISSLEMTKAEMEQVEQDPDFVSLSRQFKATAMELISVLEQK 200

Query: 444 QKTVGRTKVLLETVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLLKATELVDRHLQS 265
           QKT GRTKVLLETVP+H+LADIFVASFE+SFEEQLSMLDS+DLK+RL KATELVDRHLQS
Sbjct: 201 QKTDGRTKVLLETVPIHKLADIFVASFEMSFEEQLSMLDSIDLKIRLSKATELVDRHLQS 260

Query: 264 IRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGXXXXXXXDVAALERKMQSAGMPPN 85
           IRVAEKI+QKVEGQLSKSQKEFLLRQQMRAIKEELG       DVAALERKMQSAGMP N
Sbjct: 261 IRVAEKISQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPSN 320

Query: 84  VWKHAQRELRRLRKMQPQQPGYSSSRVY 1
           +WKHAQRELRRL+KMQPQQPGY+SSRVY
Sbjct: 321 IWKHAQRELRRLKKMQPQQPGYNSSRVY 348



 Score =  127 bits (318), Expect(2) = e-147
 Identities = 68/86 (79%), Positives = 74/86 (86%), Gaps = 5/86 (5%)
 Frame = -2

Query: 1115 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGVLPVRD 936
            MAESVELP RLAILPFRNKVLLPGAIIRIRCTSP+SVKLVEQELWQREEKGLIG+LPVRD
Sbjct: 1    MAESVELPGRLAILPFRNKVLLPGAIIRIRCTSPNSVKLVEQELWQREEKGLIGILPVRD 60

Query: 935  -AAETASVS----PMLSPGVAGESGE 873
             AAE  + S    P+LS GV  +SG+
Sbjct: 61   SAAEETTTSVGPPPVLSQGVGNDSGK 86


>ref|XP_003578503.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Brachypodium
           distachyon]
          Length = 886

 Score =  419 bits (1076), Expect(2) = e-146
 Identities = 223/268 (83%), Positives = 235/268 (87%), Gaps = 6/268 (2%)
 Frame = -1

Query: 786 GERSAKIPVSTS------DGKNQQELIQWHTRGVAARALRLSRGVEKPSGRVTYIVVLEG 625
           GE  +K P  +       D KN +E I WH RGVAARAL LSRGVEKPSGRVTY VVLEG
Sbjct: 80  GEGGSKSPGGSGGESTKQDAKNGKEPIHWHNRGVAARALHLSRGVEKPSGRVTYTVVLEG 139

Query: 624 LCRFSVQELSVRGTYYTARVARLDMTKTEMEHAEQDPDLIALSRQFKATAMELISVLEQK 445
           LCRFSVQEL+ RG+Y+ ARV+RLDMTKTE+E AEQDPDLIALSRQFKATAMELISVLEQK
Sbjct: 140 LCRFSVQELNARGSYHVARVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELISVLEQK 199

Query: 444 QKTVGRTKVLLETVPVHRLADIFVASFEISFEEQLSMLDSVDLKVRLLKATELVDRHLQS 265
           QKTVGRTKVLLETVP++RLADIFVASFEISFEEQLSMLDSVDLKVRL KATELVDRHLQS
Sbjct: 200 QKTVGRTKVLLETVPIYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDRHLQS 259

Query: 264 IRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGXXXXXXXDVAALERKMQSAGMPPN 85
           I VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG       DVAALERKMQ+AGMP N
Sbjct: 260 ILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNAGMPAN 319

Query: 84  VWKHAQRELRRLRKMQPQQPGYSSSRVY 1
           +WKHAQRELRRLRKMQPQQPGYSSSR Y
Sbjct: 320 IWKHAQRELRRLRKMQPQQPGYSSSRAY 347



 Score =  129 bits (323), Expect(2) = e-146
 Identities = 65/77 (84%), Positives = 71/77 (92%)
 Frame = -2

Query: 1103 VELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGVLPVRDAAET 924
            VELP RLAILPFRNKVLLPGAI+RIRCT+PSSVKLVEQELWQRE+KGLIGVLPVRD +E 
Sbjct: 6    VELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQREDKGLIGVLPVRD-SEA 64

Query: 923  ASVSPMLSPGVAGESGE 873
            ASV  +LSPGV G+SGE
Sbjct: 65   ASVGSILSPGVGGDSGE 81


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