BLASTX nr result
ID: Coptis23_contig00001349
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00001349 (2064 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADL36828.1| TCP domain class transcription factor [Malus x do... 805 0.0 ref|NP_186902.1| TCP-1/cpn60 chaperonin family protein [Arabidop... 801 0.0 ref|XP_002884325.1| hypothetical protein ARALYDRAFT_477487 [Arab... 799 0.0 gb|AAK62448.1|AF387003_1 putative chaperonin [Arabidopsis thaliana] 800 0.0 gb|AAM61312.1| putative chaperonin [Arabidopsis thaliana] 801 0.0 >gb|ADL36828.1| TCP domain class transcription factor [Malus x domestica] Length = 535 Score = 805 bits (2079), Expect(2) = 0.0 Identities = 400/434 (92%), Positives = 425/434 (97%) Frame = +3 Query: 63 SLRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 242 S+RVLNPNAEVLNKSAALHM INAAKGLQDVLK+NLGPKGTIKMLVGG+GDIKLTKDGNT Sbjct: 2 SIRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNT 61 Query: 243 LLKEMQIQNPTAVMIARTAVAQDDISGDGTTSTVLFIGELMKQSERCIEEGMHPRVLVDG 422 LLKEMQIQNPTA+MIARTAVAQDDISGDGTTSTVLFIGELMKQSER I+EGMHPRVLVDG Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVLFIGELMKQSERYIDEGMHPRVLVDG 121 Query: 423 FDIAKRATLQFIEKFKTPVVMGDEPDKEILKMVARTTVRTKLYEALADQLTEIIVNAVLC 602 F+IAKRATLQF+EKFKTPVVMGDEPDKEILKMVARTT+RTKLYEALADQLT+I+VN+VLC Sbjct: 122 FEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNSVLC 181 Query: 603 IRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRVENCYILTCNVSLE 782 IRKP+EPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR ENC+ILT NVSLE Sbjct: 182 IRKPEEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCFILTSNVSLE 241 Query: 783 YEKSEVNAGFFYSNAEQREAMVIAERRQVDERVKKIIELKNKLCSGTDKNFVVINQKGID 962 Y+KSEVN+GFFYSNAEQREAMV+AERRQVDERVKKII+LKNK+CSG D NFVVINQKGID Sbjct: 242 YDKSEVNSGFFYSNAEQREAMVLAERRQVDERVKKIIDLKNKVCSGNDNNFVVINQKGID 301 Query: 963 PPSLDLLAREGIVALRRAKRRNMERLVLACGGEAVNSVDDLSPDCLGWAGLVYEHVLGEE 1142 PPSLDLLAR GI+ALRRAKRRNMERLVLACGGEAVNSVDDL+PDCLGWAGLVYEHVLGEE Sbjct: 302 PPSLDLLARAGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGEE 361 Query: 1143 KYTFVENCKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVIMGAGAFEVAA 1322 KYTFVEN KNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNT+EDEAVI+GAGAFEVAA Sbjct: 362 KYTFVENVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTVEDEAVILGAGAFEVAA 421 Query: 1323 RHHLMSEVKKTVKG 1364 R +L++EVKKTVKG Sbjct: 422 RQYLVNEVKKTVKG 435 Score = 192 bits (487), Expect(2) = 0.0 Identities = 97/107 (90%), Positives = 103/107 (96%) Frame = +2 Query: 1454 VKKTVKGRAQLGVEAFANALLVVPKTLAENSGLDTQDVIISLTAEHENGNVVGLNLQTGE 1633 VKKTVKGRAQLGVEAFA+ALLVVPKTLAENSGLDTQDVII+LT EH+ GNVVGLN TGE Sbjct: 429 VKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDVIIALTGEHDQGNVVGLNHNTGE 488 Query: 1634 PLNPEMEGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 1774 PL+P+MEGIFDNYSVKRQ+INSGPVIASQLLLVDEVIRAGRNMRKPT Sbjct: 489 PLDPQMEGIFDNYSVKRQIINSGPVIASQLLLVDEVIRAGRNMRKPT 535 >ref|NP_186902.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gi|6957716|gb|AAF32460.1| putative chaperonin [Arabidopsis thaliana] gi|17065306|gb|AAL32807.1| putative chaperonin [Arabidopsis thaliana] gi|21387135|gb|AAM47971.1| putative chaperonin [Arabidopsis thaliana] gi|24899657|gb|AAN65043.1| putative chaperonin [Arabidopsis thaliana] gi|332640302|gb|AEE73823.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] Length = 535 Score = 801 bits (2070), Expect(2) = 0.0 Identities = 394/434 (90%), Positives = 422/434 (97%) Frame = +3 Query: 63 SLRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 242 S+RVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61 Query: 243 LLKEMQIQNPTAVMIARTAVAQDDISGDGTTSTVLFIGELMKQSERCIEEGMHPRVLVDG 422 LLKEMQIQNPTA+MIARTAVAQDDISGDGTTSTV+FIGELMKQSERCI+EGMHPRVLVDG Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121 Query: 423 FDIAKRATLQFIEKFKTPVVMGDEPDKEILKMVARTTVRTKLYEALADQLTEIIVNAVLC 602 F+IAKRATLQF++ FKTPVVMGDEPDKEILKMVARTT+RTKLYE LADQLT+I+VN+VLC Sbjct: 122 FEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181 Query: 603 IRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRVENCYILTCNVSLE 782 IRKP EPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR ENC+ILTCNVSLE Sbjct: 182 IRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLE 241 Query: 783 YEKSEVNAGFFYSNAEQREAMVIAERRQVDERVKKIIELKNKLCSGTDKNFVVINQKGID 962 YEKSE+NAGFFYSNAEQREAMV AERR VDERV+KIIELKNK+C+G D +FV++NQKGID Sbjct: 242 YEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGID 301 Query: 963 PPSLDLLAREGIVALRRAKRRNMERLVLACGGEAVNSVDDLSPDCLGWAGLVYEHVLGEE 1142 PPSLDLLAREGI+ALRRAKRRNMERLVLACGGEAVNSVDDL+PDCLGWAGLVYEHVLGEE Sbjct: 302 PPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGEE 361 Query: 1143 KYTFVENCKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVIMGAGAFEVAA 1322 KYTFVE KNPHSCTILIKGPNDHTIAQIKDAVRDGLR+VKNT+EDE V++GAGAFEVAA Sbjct: 362 KYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTLEDECVVLGAGAFEVAA 421 Query: 1323 RHHLMSEVKKTVKG 1364 R HL++EVKKTV+G Sbjct: 422 RQHLINEVKKTVQG 435 Score = 189 bits (479), Expect(2) = 0.0 Identities = 94/107 (87%), Positives = 104/107 (97%) Frame = +2 Query: 1454 VKKTVKGRAQLGVEAFANALLVVPKTLAENSGLDTQDVIISLTAEHENGNVVGLNLQTGE 1633 VKKTV+GRAQLGVEAFANALLVVPKTLAEN+GLDTQDVIISLT+EH+ GN+VGL+LQ GE Sbjct: 429 VKKTVQGRAQLGVEAFANALLVVPKTLAENAGLDTQDVIISLTSEHDKGNIVGLDLQDGE 488 Query: 1634 PLNPEMEGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 1774 P++P++ GIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT Sbjct: 489 PVDPQLAGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 535 >ref|XP_002884325.1| hypothetical protein ARALYDRAFT_477487 [Arabidopsis lyrata subsp. lyrata] gi|297330165|gb|EFH60584.1| hypothetical protein ARALYDRAFT_477487 [Arabidopsis lyrata subsp. lyrata] Length = 535 Score = 799 bits (2063), Expect(2) = 0.0 Identities = 394/434 (90%), Positives = 422/434 (97%) Frame = +3 Query: 63 SLRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 242 S+RVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61 Query: 243 LLKEMQIQNPTAVMIARTAVAQDDISGDGTTSTVLFIGELMKQSERCIEEGMHPRVLVDG 422 LLKEMQIQNPTA+MIARTAVAQDDISGDGTTSTV+FIGELMKQSERCI+EGMHPRVLVDG Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121 Query: 423 FDIAKRATLQFIEKFKTPVVMGDEPDKEILKMVARTTVRTKLYEALADQLTEIIVNAVLC 602 F+IAKRATLQF++ FKTPVVMGDEPDKEILKMVARTT+RTKLYE LADQLT+I+VN+VLC Sbjct: 122 FEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181 Query: 603 IRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRVENCYILTCNVSLE 782 IRKP+EPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR ENC+ILTCNVSLE Sbjct: 182 IRKPEEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLE 241 Query: 783 YEKSEVNAGFFYSNAEQREAMVIAERRQVDERVKKIIELKNKLCSGTDKNFVVINQKGID 962 YEKSE+NAGFFYSNAEQREAMV AERR VDERV+KIIELKNK+C+G D +FVV+NQKGID Sbjct: 242 YEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVVLNQKGID 301 Query: 963 PPSLDLLAREGIVALRRAKRRNMERLVLACGGEAVNSVDDLSPDCLGWAGLVYEHVLGEE 1142 PPSLDLLAREGI+ALRRAKRRNMERLVLACGGEAVNSVDDL+PD LGWAGLVYEHVLGEE Sbjct: 302 PPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDSLGWAGLVYEHVLGEE 361 Query: 1143 KYTFVENCKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVIMGAGAFEVAA 1322 KYTFVE KNPHSCTILIKGPNDHTIAQIKDAVRDGLR+VKNT+EDE V++GAGAFEVAA Sbjct: 362 KYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTLEDECVVLGAGAFEVAA 421 Query: 1323 RHHLMSEVKKTVKG 1364 R HL++EVKKTV+G Sbjct: 422 RQHLINEVKKTVQG 435 Score = 191 bits (485), Expect(2) = 0.0 Identities = 96/107 (89%), Positives = 104/107 (97%) Frame = +2 Query: 1454 VKKTVKGRAQLGVEAFANALLVVPKTLAENSGLDTQDVIISLTAEHENGNVVGLNLQTGE 1633 VKKTV+GRAQLGVEAFANALLVVPKTLAEN+GLDTQDVIISLT+EH+ GNVVGLNLQ GE Sbjct: 429 VKKTVQGRAQLGVEAFANALLVVPKTLAENAGLDTQDVIISLTSEHDKGNVVGLNLQDGE 488 Query: 1634 PLNPEMEGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 1774 P++P++ GIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT Sbjct: 489 PVDPQLAGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 535 >gb|AAK62448.1|AF387003_1 putative chaperonin [Arabidopsis thaliana] Length = 535 Score = 800 bits (2066), Expect(2) = 0.0 Identities = 393/434 (90%), Positives = 421/434 (97%) Frame = +3 Query: 63 SLRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 242 S+RVLNPNAEVLNKS ALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT Sbjct: 2 SVRVLNPNAEVLNKSTALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61 Query: 243 LLKEMQIQNPTAVMIARTAVAQDDISGDGTTSTVLFIGELMKQSERCIEEGMHPRVLVDG 422 LLKEMQIQNPTA+MIARTAVAQDDISGDGTTSTV+FIGELMKQSERCI+EGMHPRVLVDG Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121 Query: 423 FDIAKRATLQFIEKFKTPVVMGDEPDKEILKMVARTTVRTKLYEALADQLTEIIVNAVLC 602 F+IAKRATLQF++ FKTPVVMGDEPDKEILKMVARTT+RTKLYE LADQLT+I+VN+VLC Sbjct: 122 FEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181 Query: 603 IRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRVENCYILTCNVSLE 782 IRKP EPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR ENC+ILTCNVSLE Sbjct: 182 IRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLE 241 Query: 783 YEKSEVNAGFFYSNAEQREAMVIAERRQVDERVKKIIELKNKLCSGTDKNFVVINQKGID 962 YEKSE+NAGFFYSNAEQREAMV AERR VDERV+KIIELKNK+C+G D +FV++NQKGID Sbjct: 242 YEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGID 301 Query: 963 PPSLDLLAREGIVALRRAKRRNMERLVLACGGEAVNSVDDLSPDCLGWAGLVYEHVLGEE 1142 PPSLDLLAREGI+ALRRAKRRNMERLVLACGGEAVNSVDDL+PDCLGWAGLVYEHVLGEE Sbjct: 302 PPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGEE 361 Query: 1143 KYTFVENCKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVIMGAGAFEVAA 1322 KYTFVE KNPHSCTILIKGPNDHTIAQIKDAVRDGLR+VKNT+EDE V++GAGAFEVAA Sbjct: 362 KYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTLEDECVVLGAGAFEVAA 421 Query: 1323 RHHLMSEVKKTVKG 1364 R HL++EVKKTV+G Sbjct: 422 RQHLINEVKKTVQG 435 Score = 189 bits (479), Expect(2) = 0.0 Identities = 94/107 (87%), Positives = 104/107 (97%) Frame = +2 Query: 1454 VKKTVKGRAQLGVEAFANALLVVPKTLAENSGLDTQDVIISLTAEHENGNVVGLNLQTGE 1633 VKKTV+GRAQLGVEAFANALLVVPKTLAEN+GLDTQDVIISLT+EH+ GN+VGL+LQ GE Sbjct: 429 VKKTVQGRAQLGVEAFANALLVVPKTLAENAGLDTQDVIISLTSEHDKGNIVGLDLQDGE 488 Query: 1634 PLNPEMEGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 1774 P++P++ GIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT Sbjct: 489 PVDPQLAGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 535 >gb|AAM61312.1| putative chaperonin [Arabidopsis thaliana] Length = 535 Score = 801 bits (2070), Expect(2) = 0.0 Identities = 394/434 (90%), Positives = 422/434 (97%) Frame = +3 Query: 63 SLRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 242 S+RVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61 Query: 243 LLKEMQIQNPTAVMIARTAVAQDDISGDGTTSTVLFIGELMKQSERCIEEGMHPRVLVDG 422 LLKEMQIQNPTA+MIARTAVAQDDISGDGTTSTV+FIGELMKQSERCI+EGMHPRVLVDG Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121 Query: 423 FDIAKRATLQFIEKFKTPVVMGDEPDKEILKMVARTTVRTKLYEALADQLTEIIVNAVLC 602 F+IAKRATLQF++ FKTPVVMGDEPDKEILKMVARTT+RTKLYE LADQLT+I+VN+VLC Sbjct: 122 FEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181 Query: 603 IRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRVENCYILTCNVSLE 782 IRKP EPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRR ENC+ILTCNVSLE Sbjct: 182 IRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLE 241 Query: 783 YEKSEVNAGFFYSNAEQREAMVIAERRQVDERVKKIIELKNKLCSGTDKNFVVINQKGID 962 YEKSE+NAGFFYSNAEQREAMV AERR VDERV+KIIELKNK+C+G D +FV++NQKGID Sbjct: 242 YEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGID 301 Query: 963 PPSLDLLAREGIVALRRAKRRNMERLVLACGGEAVNSVDDLSPDCLGWAGLVYEHVLGEE 1142 PPSLDLLAREGI+ALRRAKRRNMERLVLACGGEAVNSVDDL+PDCLGWAGLVYEHVLGEE Sbjct: 302 PPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHVLGEE 361 Query: 1143 KYTFVENCKNPHSCTILIKGPNDHTIAQIKDAVRDGLRAVKNTIEDEAVIMGAGAFEVAA 1322 KYTFVE KNPHSCTILIKGPNDHTIAQIKDAVRDGLR+VKNT+EDE V++GAGAFEVAA Sbjct: 362 KYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTLEDECVVLGAGAFEVAA 421 Query: 1323 RHHLMSEVKKTVKG 1364 R HL++EVKKTV+G Sbjct: 422 RQHLINEVKKTVQG 435 Score = 187 bits (474), Expect(2) = 0.0 Identities = 93/107 (86%), Positives = 103/107 (96%) Frame = +2 Query: 1454 VKKTVKGRAQLGVEAFANALLVVPKTLAENSGLDTQDVIISLTAEHENGNVVGLNLQTGE 1633 VKKTV+GRAQLGVEAFANALLVVPKTLAEN+GLDTQDVIISLT+EH+ GN+VGL+LQ GE Sbjct: 429 VKKTVQGRAQLGVEAFANALLVVPKTLAENAGLDTQDVIISLTSEHDKGNIVGLDLQDGE 488 Query: 1634 PLNPEMEGIFDNYSVKRQLINSGPVIASQLLLVDEVIRAGRNMRKPT 1774 P++P++ GIFDNYSVKRQLINSGPVI SQLLLVDEVIRAGRNMRKPT Sbjct: 489 PVDPQLAGIFDNYSVKRQLINSGPVIXSQLLLVDEVIRAGRNMRKPT 535