BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001345
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquino...   259   3e-67
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...   255   9e-66
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   254   1e-65
ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquino...   251   1e-64
ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquino...   251   1e-64

>ref|XP_003518027.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like [Glycine max]
          Length = 634

 Score =  259 bits (663), Expect = 3e-67
 Identities = 125/150 (83%), Positives = 130/150 (86%)
 Frame = -3

Query: 777 WLDKIRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDR 598
           WLDK+R SNGSLPT KIRL+MQRIMQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDR
Sbjct: 485 WLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDR 544

Query: 597 SLIWXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 418
           SLIW               NACITMHSAEARKESRGAHAREDFTKRDDE WMKHTLGYW+
Sbjct: 545 SLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTLGYWD 604

Query: 417 NGKIRLDYRPVHMNTLDDEVEPFPPKARVY 328
           N K+RLDYRPVHMNTLDDEVE FPPKARVY
Sbjct: 605 NEKVRLDYRPVHMNTLDDEVESFPPKARVY 634


>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  255 bits (651), Expect = 9e-66
 Identities = 121/150 (80%), Positives = 128/150 (85%)
 Frame = -3

Query: 777 WLDKIRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDR 598
           WLDK+R SNGSL T  IRL+MQR MQNNAAVFRT+ETLEEGC LIDKAWESFHDVK+KDR
Sbjct: 489 WLDKLRNSNGSLSTSHIRLNMQRTMQNNAAVFRTQETLEEGCHLIDKAWESFHDVKVKDR 548

Query: 597 SLIWXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 418
           SLIW               NAC+TMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE
Sbjct: 549 SLIWNSDLIETLELENLLINACVTMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 608

Query: 417 NGKIRLDYRPVHMNTLDDEVEPFPPKARVY 328
           N K+RLDYRPVHMNTLDDE+EPFPPKARVY
Sbjct: 609 NEKVRLDYRPVHMNTLDDEIEPFPPKARVY 638


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 622

 Score =  254 bits (649), Expect = 1e-65
 Identities = 122/150 (81%), Positives = 129/150 (86%)
 Frame = -3

Query: 777 WLDKIRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDR 598
           WLDK+R SNGSLPT KIRL+MQR MQNNAAVFRT+ETLEEGCQLIDKAWESFHDVKLKDR
Sbjct: 473 WLDKLRNSNGSLPTSKIRLNMQRTMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDR 532

Query: 597 SLIWXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 418
           SLIW               NACITMHSAEARKESRGAHAREDFTKRDD++WMKHTLGYWE
Sbjct: 533 SLIWNSDLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDKDWMKHTLGYWE 592

Query: 417 NGKIRLDYRPVHMNTLDDEVEPFPPKARVY 328
           N K+RLDYRPVHMNTLDDE+E  PPKARVY
Sbjct: 593 NEKVRLDYRPVHMNTLDDEMETIPPKARVY 622


>ref|XP_003631879.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial isoform 2 [Vitis vinifera]
          Length = 622

 Score =  251 bits (641), Expect = 1e-64
 Identities = 118/150 (78%), Positives = 129/150 (86%)
 Frame = -3

Query: 777 WLDKIRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDR 598
           WLDK+R SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDR
Sbjct: 473 WLDKLRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDR 532

Query: 597 SLIWXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 418
           SLIW               NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWE
Sbjct: 533 SLIWNSDLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWE 592

Query: 417 NGKIRLDYRPVHMNTLDDEVEPFPPKARVY 328
           N K+RLDYRPVHMN LDDE+E  PPKARVY
Sbjct: 593 NEKVRLDYRPVHMNPLDDEIESIPPKARVY 622


>ref|XP_002269407.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial isoform 1 [Vitis vinifera]
           gi|297735168|emb|CBI17530.3| unnamed protein product
           [Vitis vinifera]
          Length = 670

 Score =  251 bits (641), Expect = 1e-64
 Identities = 118/150 (78%), Positives = 129/150 (86%)
 Frame = -3

Query: 777 WLDKIRRSNGSLPTYKIRLDMQRIMQNNAAVFRTRETLEEGCQLIDKAWESFHDVKLKDR 598
           WLDK+R SNGS+PT KIRL+MQR+MQNNAAVFRT+ETLEEGC+LIDKAWESFHDV+LKDR
Sbjct: 521 WLDKLRNSNGSIPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDKAWESFHDVQLKDR 580

Query: 597 SLIWXXXXXXXXXXXXXXXNACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWE 418
           SLIW               NACITMHSAEARKESRGAHAREDFTKRDDENW++HTLGYWE
Sbjct: 581 SLIWNSDLSETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWIRHTLGYWE 640

Query: 417 NGKIRLDYRPVHMNTLDDEVEPFPPKARVY 328
           N K+RLDYRPVHMN LDDE+E  PPKARVY
Sbjct: 641 NEKVRLDYRPVHMNPLDDEIESIPPKARVY 670