BLASTX nr result

ID: Coptis23_contig00001328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001328
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   181   1e-43
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   181   1e-43
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   181   2e-43
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  201 bits (512), Expect = 1e-49
 Identities = 90/176 (51%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
 Frame = -3

Query: 725 YPSTCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFLQDSL 546
           Y ++CS CNL+ S W+Y+CK C + LHI C+Q+P +I HP  P H L L S P +   S 
Sbjct: 28  YMNSCSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPGGSF 87

Query: 545 ALHSLTSFPQRLQGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQAHPHT 366
                              CD CG Q  GF Y+CT CD D H++C + PLSL HQ+HPH 
Sbjct: 88  N------------------CDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSHPHQ 129

Query: 365 LNLAFNSPYQTKGFSCDICQKLGSNRWLYRCNACEFDVHLNCATS--NPRVSEIQH 204
           LNLAF  PYQTKGFSCDIC K+GSN WLYRC+ACEFD H+ CA S  N  +  +QH
Sbjct: 130 LNLAFYPPYQTKGFSCDICHKIGSNHWLYRCSACEFDAHMKCAMSVNNTPLPHVQH 185



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
 Frame = -3

Query: 509 QGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQAHP-HTLNLAFNSPYQT 333
           Q L +  C AC  Q +G+ Y+C  C+   H+ C  MP  + H  HP H L L     Y  
Sbjct: 25  QSLYMNSCSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFSTPVYPG 84

Query: 332 KGFSCDICQKLGSNRWLYRCNACEFDVHLNCATSNPRVSEIQH 204
             F+CD C  L  N + Y C  C+FDVH+ CAT+   ++   H
Sbjct: 85  GSFNCDGC-GLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSH 126


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  181 bits (459), Expect = 1e-43
 Identities = 81/165 (49%), Positives = 106/165 (64%)
 Frame = -3

Query: 719 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFLQDSLAL 540
           ++CSGC L++S  IY CK C Y LHI CSQ+PQ I H     HAL+L+  PA+       
Sbjct: 35  ASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAY------- 87

Query: 539 HSLTSFPQRLQGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQAHPHTLN 360
                 P+ L       CDACG+Q  GF Y+C  C++D H+LC S PL L HQ+H H L 
Sbjct: 88  ------PEGLFN-----CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLA 136

Query: 359 LAFNSPYQTKGFSCDICQKLGSNRWLYRCNACEFDVHLNCATSNP 225
           L+F+ PY  K FSCDIC+++G++ WLYRC+ CEFD HL+CAT+ P
Sbjct: 137 LSFSPPYHNKSFSCDICRQIGTSHWLYRCDECEFDAHLSCATATP 181


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  181 bits (459), Expect = 1e-43
 Identities = 81/165 (49%), Positives = 106/165 (64%)
 Frame = -3

Query: 719 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFLQDSLAL 540
           ++CSGC L++S  IY CK C Y LHI CSQ+PQ I H     HAL+L+  PA+       
Sbjct: 41  ASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKAHALSLLPNPAY------- 93

Query: 539 HSLTSFPQRLQGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQAHPHTLN 360
                 P+ L       CDACG+Q  GF Y+C  C++D H+LC S PL L HQ+H H L 
Sbjct: 94  ------PEGLFN-----CDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRLA 142

Query: 359 LAFNSPYQTKGFSCDICQKLGSNRWLYRCNACEFDVHLNCATSNP 225
           L+F+ PY  K FSCDIC+++G++ WLYRC+ CEFD HL+CAT+ P
Sbjct: 143 LSFSPPYHNKSFSCDICRQIGTSHWLYRCDECEFDAHLSCATATP 187


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  181 bits (458), Expect = 2e-43
 Identities = 81/168 (48%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = -3

Query: 737 LPQNYPST-CSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAF 561
           L  +YP T CS C L SS W+Y+C  C + LH+ CSQ+P +I HP+ P H L+L+  P +
Sbjct: 24  LQSSYPITHCSACQLESSGWMYSCNPCNFTLHLSCSQLPSLITHPSHPNHTLDLLPSPIY 83

Query: 560 LQDSLALHSLTSFPQRLQGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQ 381
                +                  CDACG    GF Y+C  C  D H  C   PLSL +Q
Sbjct: 84  PNGVFS------------------CDACGHGGLGFGYHCNHCSFDIHTTCAQNPLSLTNQ 125

Query: 380 AHPHTLNLAFNSPYQTKGFSCDICQKLGSNRWLYRCNACEFDVHLNCA 237
            HPH L L F+ PY TKGFSCDICQK+GSN WLYRC  CEFD HL CA
Sbjct: 126 FHPHLLQLTFDPPYHTKGFSCDICQKIGSNHWLYRCAPCEFDAHLECA 173


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  174 bits (440), Expect = 2e-41
 Identities = 78/173 (45%), Positives = 98/173 (56%)
 Frame = -3

Query: 719 STCSGCNLRSSDWIYTCKACKYVLHIPCSQVPQVIQHPADPKHALNLVSRPAFLQDSLAL 540
           ++CSGC L+ S WIY C  C Y LH+ CSQ+PQ I HP    H L+L+S P +  D    
Sbjct: 35  ASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQITHPYHQNHVLSLLSTPMYPGDLFN- 93

Query: 539 HSLTSFPQRLQGLAVPLCDACGEQVTGFRYNCTACDLDFHVLCVSMPLSLKHQAHPHTLN 360
                            CDACG+Q  GF Y+C  C++  H  C +MPL L HQ+H H LN
Sbjct: 94  -----------------CDACGKQGNGFSYHCGTCNIYIHTTCAAMPLVLTHQSHHHQLN 136

Query: 359 LAFNSPYQTKGFSCDICQKLGSNRWLYRCNACEFDVHLNCATSNPRVSEIQHQ 201
           L   +PY    FSCD+C   GS +WLYRCN C FD HL+CA S P  ++ Q Q
Sbjct: 137 LTPFAPYPNMSFSCDMCHNFGSKQWLYRCNLCGFDAHLDCAVSQPNPAQAQAQ 189


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