BLASTX nr result

ID: Coptis23_contig00001322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001322
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein...   552   e-155
ref|NP_001241455.1| uncharacterized protein LOC100778205 [Glycin...   548   e-153
ref|XP_003631071.1| Guanine nucleotide-binding protein subunit b...   546   e-153
ref|XP_002281279.1| PREDICTED: guanine nucleotide-binding protei...   546   e-153
ref|XP_004137327.1| PREDICTED: guanine nucleotide-binding protei...   546   e-153

>gb|AFV60006.1| heterotrimeric guanine nucleotide-binding protein subunit beta
            [Eschscholzia californica]
          Length = 313

 Score =  552 bits (1422), Expect = e-155
 Identities = 265/316 (83%), Positives = 287/316 (90%)
 Frame = +3

Query: 75   MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 254
            M++ + LRGT+KGH D+VTAIATPIDNSDMIVSSSRDKSILVW L ++  +YGVP+RRLT
Sbjct: 1    MSDVLVLRGTLKGHDDMVTAIATPIDNSDMIVSSSRDKSILVWHLTKEDPTYGVPRRRLT 60

Query: 255  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQI 434
            GHSHFVQDVVLSSDGQFALSG+WDGELRLWD+NTG TTRRFVGHTKDVLSVAFSIDNRQI
Sbjct: 61   GHSHFVQDVVLSSDGQFALSGAWDGELRLWDLNTGTTTRRFVGHTKDVLSVAFSIDNRQI 120

Query: 435  VSASRDRTIKLWNTLGECKYTIQDGDSHTNWVSCVRFSPNTFQPTIVSGSWDKTVKVWNL 614
            VSASRDR+IKLWNTLGECKYTIQD DSHTNWVSCVRFSPNT QPTIVSG WD+TVKVWNL
Sbjct: 121  VSASRDRSIKLWNTLGECKYTIQDADSHTNWVSCVRFSPNTLQPTIVSGFWDRTVKVWNL 180

Query: 615  SNCKLRCTLAGHAGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKKLYSLDAGAIIHAL 794
            +NCKLR TLAGH GYVNTVAVSPDGSLCASGGKDGV LLWDLAEGKKLYSL AG IIHAL
Sbjct: 181  TNCKLRSTLAGHGGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLPAGHIIHAL 240

Query: 795  CFSPNRYWLCAATEQCVKIWDLESKSIVQDLKPPVESPPPGKNSMLYCTSLSWSSDGSTL 974
            CFSPNRYWLCAAT+  ++IWDLESKS+VQ+LKP V     GKN M YCTSL+WSSDGSTL
Sbjct: 241  CFSPNRYWLCAATQGDIQIWDLESKSLVQELKPEVTQ---GKNKMFYCTSLNWSSDGSTL 297

Query: 975  FTGYTDGAIRVWGVGR 1022
            FTG+TDG IRV+ V R
Sbjct: 298  FTGFTDGTIRVYAVSR 313


>ref|NP_001241455.1| uncharacterized protein LOC100778205 [Glycine max]
            gi|255645048|gb|ACU23023.1| unknown [Glycine max]
          Length = 325

 Score =  548 bits (1412), Expect = e-153
 Identities = 258/324 (79%), Positives = 292/324 (90%), Gaps = 8/324 (2%)
 Frame = +3

Query: 75   MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 254
            MA+ + LRGTM+ HTD+VTAIATPIDNSDMIV++SRDKSI++W L ++ ++YGVP+RRLT
Sbjct: 1    MADNLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 255  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQI 434
            GHSHFVQDVVLSSDGQFALSGSWDGELRLWD+  G + RRFVGHTKDVLSVAFSIDNRQI
Sbjct: 61   GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQI 120

Query: 435  VSASRDRTIKLWNTLGECKYTIQDGDSHTNWVSCVRFSPNTFQPTIVSGSWDKTVKVWNL 614
            VSASRDRTIKLWNTLGECKYTIQDGD+H++WVSCVRFSP+T QPTIVS SWD+TVKVWNL
Sbjct: 121  VSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNL 180

Query: 615  SNCKLRCTLAGHAGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKKLYSLDAGAIIHAL 794
            +NCKLR TLAGH GYVNTVAVSPDGSLCASGGKDGV LLWDLAEGK+LYSLDAG+IIHAL
Sbjct: 181  TNCKLRNTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHAL 240

Query: 795  CFSPNRYWLCAATEQCVKIWDLESKSIVQDLKPPVESPP--------PGKNSMLYCTSLS 950
            CFSPNRYWLCAATEQ +KIWDLESKSIV+DLK  +++          P K  ++YCTSL+
Sbjct: 241  CFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEADATTGGGNPNKKKVIYCTSLN 300

Query: 951  WSSDGSTLFTGYTDGAIRVWGVGR 1022
            WSSDGSTLF+GYTDG +RVWG+GR
Sbjct: 301  WSSDGSTLFSGYTDGVVRVWGIGR 324


>ref|XP_003631071.1| Guanine nucleotide-binding protein subunit beta-like protein
            [Medicago truncatula] gi|355525093|gb|AET05547.1| Guanine
            nucleotide-binding protein subunit beta-like protein
            [Medicago truncatula]
          Length = 325

 Score =  546 bits (1408), Expect = e-153
 Identities = 257/324 (79%), Positives = 292/324 (90%), Gaps = 8/324 (2%)
 Frame = +3

Query: 75   MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 254
            MAE + LRGTM+ HTD+VTAIATPIDNSDMIV++SRDKSI++W L ++ ++YGVP+RRLT
Sbjct: 1    MAEGLVLRGTMRAHTDVVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLT 60

Query: 255  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQI 434
            GHSHFVQDVVLSSDGQFALSGSWDGELRLWD+N G + RRFVGHTKDVLSVAFSIDNRQI
Sbjct: 61   GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLNAGTSARRFVGHTKDVLSVAFSIDNRQI 120

Query: 435  VSASRDRTIKLWNTLGECKYTIQDGDSHTNWVSCVRFSPNTFQPTIVSGSWDKTVKVWNL 614
            VSASRDRTIKLWNTLGECKYTIQDGD+H++WVSCVRFSP+T QPTIVS SWD+TVKVWNL
Sbjct: 121  VSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWNL 180

Query: 615  SNCKLRCTLAGHAGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKKLYSLDAGAIIHAL 794
            +NCKLR TLAGH+GYVNTVAVSPDGSLCASGGKDGV LLWDLAEGK+LYSLDAG+IIHAL
Sbjct: 181  TNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHAL 240

Query: 795  CFSPNRYWLCAATEQCVKIWDLESKSIVQDLKPPVESPPPG--------KNSMLYCTSLS 950
            CFSPNRYWLCAATE  +KIWDLESKSIV+DLK  +++            K  ++YCTSL+
Sbjct: 241  CFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIYCTSLN 300

Query: 951  WSSDGSTLFTGYTDGAIRVWGVGR 1022
            WS+DGSTLF+GYTDG +RVWG+GR
Sbjct: 301  WSADGSTLFSGYTDGVVRVWGIGR 324


>ref|XP_002281279.1| PREDICTED: guanine nucleotide-binding protein subunit beta-like
            protein isoform 1 [Vitis vinifera]
            gi|359491001|ref|XP_003634197.1| PREDICTED: guanine
            nucleotide-binding protein subunit beta-like protein
            isoform 2 [Vitis vinifera] gi|147784318|emb|CAN61810.1|
            hypothetical protein VITISV_026180 [Vitis vinifera]
          Length = 327

 Score =  546 bits (1408), Expect = e-153
 Identities = 259/326 (79%), Positives = 289/326 (88%), Gaps = 10/326 (3%)
 Frame = +3

Query: 75   MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 254
            MAE + LRGTM+ HTD+VTAIATPIDNSDMIV+SSRDKSI++W L +D ++YGVP+RRLT
Sbjct: 1    MAETLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIILWHLTKDDKTYGVPRRRLT 60

Query: 255  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQI 434
            GHSHFVQDVVLSSDGQFALSGSWDGELRLWD+  G + RRFVGHTKDVLSVAFS+DNRQI
Sbjct: 61   GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSVDNRQI 120

Query: 435  VSASRDRTIKLWNTLGECKYTIQDGDSHTNWVSCVRFSPNTFQPTIVSGSWDKTVKVWNL 614
            VSASRDRTIKLWNTLGECKYTIQD D+H++WVSCVRFSPN  QPTIVS SWD+TVKVWNL
Sbjct: 121  VSASRDRTIKLWNTLGECKYTIQDADAHSDWVSCVRFSPNNLQPTIVSASWDRTVKVWNL 180

Query: 615  SNCKLRCTLAGHAGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKKLYSLDAGAIIHAL 794
            +NCKLR TLAGH GYVNTVAVSPDGSLCASGGKDGV LLWDLAEGK+LYSLDAGAIIHAL
Sbjct: 181  TNCKLRATLAGHGGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAIIHAL 240

Query: 795  CFSPNRYWLCAATEQCVKIWDLESKSIVQDLKPPVE----------SPPPGKNSMLYCTS 944
            CFSPNRYWLCAATEQ +KIWDLESKSIV+DLK  ++          +    K  ++YCTS
Sbjct: 241  CFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEDTTTTAKKKGKIIYCTS 300

Query: 945  LSWSSDGSTLFTGYTDGAIRVWGVGR 1022
            LSWS+DGSTLF+GYTDG +RVWG+GR
Sbjct: 301  LSWSADGSTLFSGYTDGVVRVWGIGR 326


>ref|XP_004137327.1| PREDICTED: guanine nucleotide-binding protein subunit beta-like
            protein-like [Cucumis sativus]
            gi|449497541|ref|XP_004160431.1| PREDICTED: guanine
            nucleotide-binding protein subunit beta-like protein-like
            [Cucumis sativus]
          Length = 327

 Score =  546 bits (1407), Expect = e-153
 Identities = 261/326 (80%), Positives = 291/326 (89%), Gaps = 10/326 (3%)
 Frame = +3

Query: 75   MAEQIHLRGTMKGHTDIVTAIATPIDNSDMIVSSSRDKSILVWTLNQDTESYGVPKRRLT 254
            MAE + LRGTM+ HTD+VTAIATPIDNSDMIV+SSRDKSI++W L ++ ++YGVP+RRL 
Sbjct: 1    MAEGLVLRGTMRAHTDMVTAIATPIDNSDMIVTSSRDKSIIMWRLTKEEKTYGVPQRRLN 60

Query: 255  GHSHFVQDVVLSSDGQFALSGSWDGELRLWDINTGVTTRRFVGHTKDVLSVAFSIDNRQI 434
            GHSHFVQDVVLSSDGQFALSGSWDGELRLWD+ TG T+RRFVGH+KDVLSVAFSIDNRQI
Sbjct: 61   GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGNTSRRFVGHSKDVLSVAFSIDNRQI 120

Query: 435  VSASRDRTIKLWNTLGECKYTIQDGDSHTNWVSCVRFSPNTFQPTIVSGSWDKTVKVWNL 614
            VSASRDRTIKLWNTLGECKYTIQDGD+H++WVSCVRFSPNT QPTIVS SWDKTVKVWNL
Sbjct: 121  VSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 180

Query: 615  SNCKLRCTLAGHAGYVNTVAVSPDGSLCASGGKDGVTLLWDLAEGKKLYSLDAGAIIHAL 794
            +NCKLR TLAGHAGYVNTVAVSPDGSLCASGGKDGV LLWDLAEGK+LYSLDAG+IIHAL
Sbjct: 181  TNCKLRVTLAGHAGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHAL 240

Query: 795  CFSPNRYWLCAATEQCVKIWDLESKSIVQDLKPPVE----------SPPPGKNSMLYCTS 944
            CFSPNRYWLCAATE  +KIWDLESKSIV+DLK  ++          +    K  ++YCTS
Sbjct: 241  CFSPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEAEKTDDTHAATANKIKVIYCTS 300

Query: 945  LSWSSDGSTLFTGYTDGAIRVWGVGR 1022
            LSWS+DGSTLF GYTDG +RVWG+GR
Sbjct: 301  LSWSADGSTLFGGYTDGVVRVWGIGR 326


Top