BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001316
         (2121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634670.1| PREDICTED: transcription factor TCP4-like [V...   296   1e-77
ref|XP_002519561.1| conserved hypothetical protein [Ricinus comm...   293   1e-76
dbj|BAJ07175.1| MdTCP4A [Malus x domestica]                           292   2e-76
gb|ADL36833.1| TCP domain class transcription factor [Malus x do...   286   2e-74
dbj|BAJ07176.1| MdTCP4B [Malus x domestica]                           284   6e-74

>ref|XP_003634670.1| PREDICTED: transcription factor TCP4-like [Vitis vinifera]
          Length = 398

 Score =  296 bits (759), Expect = 1e-77
 Identities = 193/425 (45%), Positives = 224/425 (52%), Gaps = 11/425 (2%)
 Frame = +3

Query: 861  MGDNPQQPQQ-TTSRLGLLKSSXXXXXXXXXXXXXXXRSTGRKDRHSKVCTAKGPRDRRV 1037
            MG+  QQ Q  ++SR+G+   S               RSTGRKDRHSKVCTAKGPRDRRV
Sbjct: 1    MGETHQQQQAASSSRMGM--RSVVGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRV 58

Query: 1038 RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTXXXXXX 1217
            RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDELA+LP W P+A T T      
Sbjct: 59   RLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAQLPAWHPTAITVTAAAAAA 118

Query: 1218 XXXXXXXXXXXXXDGFACSSKRPLGVEQDGSGYGFQQQHLSN-------NPTSSSGFLPP 1376
                                + P  V  DG     Q  H +N       NP  +  FLPP
Sbjct: 119  TTATTTHHQE--------DEENPNQVAIDGDDDRVQMHHGNNPDPNPNPNPNQNPSFLPP 170

Query: 1377 SLDSDAIADTIKSFFPIAAS--TTSPPIHFPNYPPDLLSRTTSSHTQDLRLSLQSFQDPI 1550
            SLDSD IADTIKSFFP+ AS  ++S  + F +YPPDLLSR TSS  QDLRLSLQSFQDP+
Sbjct: 171  SLDSDTIADTIKSFFPMGASGESSSSSVQFQSYPPDLLSR-TSSQNQDLRLSLQSFQDPM 229

Query: 1551 LLXXXXXXXXXXXXXXXXXTLFSNSSPLPFETNSTSWSDQQHQEIGRFQRMVAWNAGTDA 1730
            LL                  LF   SPL F+  S +WS+    E+GRFQRMVAWNAG ++
Sbjct: 230  LL---HHHHTQSHSHHQQQALF---SPLGFDAPSAAWSEHHAAEMGRFQRMVAWNAGAES 283

Query: 1731 XXXXXXXXXXXXXXN-SQQPSQPVLGQNPFFTQRGPLQSSNSPQFRAXXXXXXXXXXXXX 1907
                            +  P QP+  Q+  ++QRGPLQSSN+P  RA             
Sbjct: 284  SGGGGFVFNSPPTPTPAPPPLQPLFCQSQMYSQRGPLQSSNTPSIRA------------- 330

Query: 1908 XXXXXXXXXXXXXXXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXPARIQGEEEHDAASNK 2087
                                      S+                PARIQGEEEHD  S+K
Sbjct: 331  --WIDPPIAATIDHHHHHHQTTPIQPSMISGIGFVPGGFSGFRIPARIQGEEEHDGISDK 388

Query: 2088 PPSAS 2102
            P SAS
Sbjct: 389  PSSAS 393


>ref|XP_002519561.1| conserved hypothetical protein [Ricinus communis]
            gi|223541258|gb|EEF42810.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 595

 Score =  293 bits (751), Expect = 1e-76
 Identities = 206/488 (42%), Positives = 240/488 (49%), Gaps = 33/488 (6%)
 Frame = +3

Query: 738  LFYGREVEGSSLEAQPPKKRSYFPLSEE----QRRSIEYARFGEKMGDNPQQPQQTTSRL 905
            L+   +++   +   PPKKRS+F  S      Q +  EYAR   KMG++ +Q QQ  +R 
Sbjct: 134  LYQRLDLQQLQIPLHPPKKRSHFSSSSSTSIIQEQGFEYAR---KMGESQRQHQQQPARS 190

Query: 906  GLLKSSXXXXXXXXXXXXXXXRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR 1085
              L +                RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR
Sbjct: 191  SRLGTRNTVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDR 250

Query: 1086 LGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTXXXXXXXXXXXXXXXXXXXDGF 1265
            LGYDRPSKAVDWLIKKAK+AIDEL ELP W P+                        D  
Sbjct: 251  LGYDRPSKAVDWLIKKAKAAIDELEELPAWNPTTAVAKDSTQIGDERDYQLPVENNLDAI 310

Query: 1266 ACSSKRPLG------VEQDGSGYGFQQQHLSNNPTSSSGFLPPSLDSDAIADTIKSFFPI 1427
              ++K P           D  G   QQQHL+ NP +SS FLPPSLDSDAIADTIKSFFP+
Sbjct: 311  GGNTKTPAATATTTTTAADVQGIE-QQQHLAENPNNSSSFLPPSLDSDAIADTIKSFFPM 369

Query: 1428 AASTTSPPIHFPNYPPDLLSRTTSSHTQDLRLSLQSFQDPILLXXXXXXXXXXXXXXXXX 1607
             A  T+    F +YPPDLLSR TSS  QDLRLSL SFQ+PILL                 
Sbjct: 370  GA--TAETTQFQSYPPDLLSR-TSSQNQDLRLSLHSFQEPILL--QQQHHHHGHAQNEQQ 424

Query: 1608 TLFSNSSP---LPFETNSTSWSD--QQHQ-EIGRFQRMVAWNA------------GTDAX 1733
             L S+ +      F+ +S  WS+  Q H  +I RFQRM+AWNA            G  + 
Sbjct: 425  VLLSSGTAAHHFGFDGSSAGWSEHHQNHSADIARFQRMIAWNAAAAAVDATDTGSGGTSG 484

Query: 1734 XXXXXXXXXXXXXNSQQPS---QPVLGQ-NPFFTQRGPLQSSNSPQFRAXXXXXXXXXXX 1901
                          +  P+   QP+ GQ N F +QRGPLQSSN P  RA           
Sbjct: 485  SRGGGFIFNPILPQTVSPTPLLQPLFGQSNQFLSQRGPLQSSNMPSIRA----------- 533

Query: 1902 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXPARIQG-EEEHDAA 2078
                                         L                PARIQG EEEHD  
Sbjct: 534  -----------WIDPGADHHHHHHTQISQLHHHHQQSFGGISGFRVPARIQGEEEEHDGI 582

Query: 2079 SNKPPSAS 2102
             NKP S S
Sbjct: 583  HNKPSSVS 590


>dbj|BAJ07175.1| MdTCP4A [Malus x domestica]
          Length = 431

 Score =  292 bits (748), Expect = 2e-76
 Identities = 202/454 (44%), Positives = 230/454 (50%), Gaps = 40/454 (8%)
 Frame = +3

Query: 861  MGDNPQQPQQTTSRLGLLKSSXXXXXXXXXXXXXXX-----RSTGRKDRHSKVCTAKGPR 1025
            MGD+      T+SRLG+   S                    R+TGRKDRHSKVCTAKGPR
Sbjct: 1    MGDSHHHQATTSSRLGIRPPSSGAGVVSTDIVEVVRGSHIVRATGRKDRHSKVCTAKGPR 60

Query: 1026 DRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELPPWRPSATTPTXX 1205
            DRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AIDEL ELP W P +T+ T  
Sbjct: 61   DRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELDELPSWNPHSTSTT-- 118

Query: 1206 XXXXXXXXXXXXXXXXXDGFACSSKRPLGVEQDGS--------GYGFQQQHLSNNPTSSS 1361
                              G  C +    GV+  GS        G G  +Q +  NP S+S
Sbjct: 119  ----ASVPGMETHNPTTTGIHCFA----GVDAIGSANQRTTMVGSGVSEQKIVQNPNSNS 170

Query: 1362 GFLPPSLDSDAIADTIKSFFPIAASTTSPPIHFP--------NYPPDLLSRTTSSHTQDL 1517
             FLPPSLDSDAIADTIKSFFP  AS  +     P        NYPPDLLSR TSS +QDL
Sbjct: 171  TFLPPSLDSDAIADTIKSFFPTGASAIAAAAEAPSSTIQFHQNYPPDLLSR-TSSQSQDL 229

Query: 1518 RLSLQSFQDPILLXXXXXXXXXXXXXXXXXTLFSNS-SPLPFETNSTSWSD----QQHQE 1682
            RLSLQSFQDPILL                 +LFS S +PL F+ +S +W++    QQ QE
Sbjct: 230  RLSLQSFQDPILL-----HQHHAQTHQNEQSLFSGSQNPLGFDGSSAAWAEHHHNQQQQE 284

Query: 1683 IGRFQRMVAWNAG-------------TDAXXXXXXXXXXXXXXNSQQPSQPVL-GQNPFF 1820
            + RFQRMVAWN+G             +                +S Q  QP L GQ+ FF
Sbjct: 285  MNRFQRMVAWNSGGGDSGDNGGGSSSSGGFTFNSLLPTQQSGTSSLQQQQPSLFGQSQFF 344

Query: 1821 TQRGPLQSSNSPQFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLXXX 2000
             QRGPLQSSNSP  RA                                       S    
Sbjct: 345  FQRGPLQSSNSPSIRA------------WMMDQQNQQSISHDHHHQISQSIHHQPSFSGM 392

Query: 2001 XXXXXXXXXXXXXPARIQGEEEHDAASNKPPSAS 2102
                         PARI GEEEHD  S+KP SAS
Sbjct: 393  GFTSGGGFSGFHIPARIHGEEEHDGISDKPSSAS 426


>gb|ADL36833.1| TCP domain class transcription factor [Malus x domestica]
          Length = 435

 Score =  286 bits (732), Expect = 2e-74
 Identities = 187/404 (46%), Positives = 215/404 (53%), Gaps = 26/404 (6%)
 Frame = +3

Query: 969  RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAI 1148
            R+TGRKDRHSKVCTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AI
Sbjct: 46   RATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 105

Query: 1149 DELAELPPWRP---SATTPTXXXXXXXXXXXXXXXXXXXDGFACSSKRPLGVEQDGSGYG 1319
            DEL ELP W P   S T                      D    +++R +       G G
Sbjct: 106  DELEELPSWNPHSISTTAAVPAMETQNPSATGIHCFAAVDAIGSANRRTM------VGSG 159

Query: 1320 FQQQHLSNNPTSSSGFLPPSLDSDAIADTIKSFFPIAASTTSPPIHFP--------NYPP 1475
              +Q  + NP S+S FLPPSLDSDAIADTIKSFFP+ AS  +     P        NYPP
Sbjct: 160  VSEQQFAQNPNSNSTFLPPSLDSDAIADTIKSFFPMGASAAAAAAESPSSTIQFHQNYPP 219

Query: 1476 DLLSRTTSSHTQDLRLSLQSFQDPILL--XXXXXXXXXXXXXXXXXTLFSNS-SPLPFET 1646
            DLLS+  SS +QDLRLSLQSFQDPILL                   TLFS S + L F+ 
Sbjct: 220  DLLSK-ASSQSQDLRLSLQSFQDPILLHHHDAQNQHHHAQTHQNEQTLFSGSQNQLGFDG 278

Query: 1647 NSTSWSD----QQHQEIGRFQRMVAWNAGTDAXXXXXXXXXXXXXXNSQQPS-------Q 1793
            +  SW++    QQ QE+ RFQRMVAW++G +                +QQ S       Q
Sbjct: 279  SPGSWAEHHHNQQQQEMNRFQRMVAWDSGGNGGPSSAGGFIFNSLLPTQQGSTSPLQQQQ 338

Query: 1794 PVL-GQNPFFTQRGPLQSSNSPQFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1970
            P L GQ+ FF+QRGPLQSSNSP  RA                                  
Sbjct: 339  PSLFGQSQFFSQRGPLQSSNSPSVRA------------WMMDQQNQQSISHDHRHQISQS 386

Query: 1971 XXXXXSLXXXXXXXXXXXXXXXXPARIQGEEEHDAASNKPPSAS 2102
                 S+                PARI GEEEHD  S+KP SAS
Sbjct: 387  IHHQQSISGMGFASGGGFSGFHIPARIHGEEEHDGTSDKPSSAS 430


>dbj|BAJ07176.1| MdTCP4B [Malus x domestica]
          Length = 435

 Score =  284 bits (727), Expect = 6e-74
 Identities = 186/404 (46%), Positives = 215/404 (53%), Gaps = 26/404 (6%)
 Frame = +3

Query: 969  RSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAI 1148
            R+TGRKDRHSKVCTAKGPRDRRVRL+AHTAIQFYDVQDRLGYDRPSKAVDWLIKKAK+AI
Sbjct: 46   RATGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAI 105

Query: 1149 DELAELPPWRP---SATTPTXXXXXXXXXXXXXXXXXXXDGFACSSKRPLGVEQDGSGYG 1319
            DEL ELP W P   S T                      D    +++R +       G G
Sbjct: 106  DELEELPSWNPHSISTTAAVPAMETQNPSATGIHCFAAVDAIGSANRRTM------VGSG 159

Query: 1320 FQQQHLSNNPTSSSGFLPPSLDSDAIADTIKSFFPIAASTTSPPIHFP--------NYPP 1475
              +Q  + +P S+S FLPPSLDSDAIADTIKSFFP+ AS  +     P        NYPP
Sbjct: 160  VSEQQFAQSPNSNSTFLPPSLDSDAIADTIKSFFPMGASAAAAAAESPSSTIQFHQNYPP 219

Query: 1476 DLLSRTTSSHTQDLRLSLQSFQDPILL--XXXXXXXXXXXXXXXXXTLFSNS-SPLPFET 1646
            DLLS+  SS +QDLRLSLQSFQDPILL                   TLFS S + L F+ 
Sbjct: 220  DLLSK-ASSQSQDLRLSLQSFQDPILLHHHDAQNQHHHAQTHQNEQTLFSGSQNQLGFDG 278

Query: 1647 NSTSWSD----QQHQEIGRFQRMVAWNAGTDAXXXXXXXXXXXXXXNSQQPS-------Q 1793
            +  SW++    QQ QE+ RFQRMVAW++G +                +QQ S       Q
Sbjct: 279  SPGSWAEHHHNQQQQEMNRFQRMVAWDSGGNGGPSSAGGFIFNSLLPTQQGSTSPLQQQQ 338

Query: 1794 PVL-GQNPFFTQRGPLQSSNSPQFRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1970
            P L GQ+ FF+QRGPLQSSNSP  RA                                  
Sbjct: 339  PSLFGQSQFFSQRGPLQSSNSPSVRA------------WMVDQQNQQSISHDHHHQISQS 386

Query: 1971 XXXXXSLXXXXXXXXXXXXXXXXPARIQGEEEHDAASNKPPSAS 2102
                 S+                PARI GEEEHD  S+KP SAS
Sbjct: 387  IHHQQSISGMGFASGGGFSGFHIPARIHGEEEHDGTSDKPSSAS 430