BLASTX nr result

ID: Coptis23_contig00001315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001315
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medic...   523   e-146
ref|XP_004137663.1| PREDICTED: DNA replication licensing factor ...   522   e-146
dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]          522   e-146
ref|XP_002273675.1| PREDICTED: DNA replication licensing factor ...   522   e-146
emb|CAN78904.1| hypothetical protein VITISV_022714 [Vitis vinifera]   522   e-146

>ref|XP_003609791.1| DNA replication licensing factor mcm2 [Medicago truncatula]
            gi|355510846|gb|AES91988.1| DNA replication licensing
            factor mcm2 [Medicago truncatula]
          Length = 883

 Score =  523 bits (1347), Expect = e-146
 Identities = 256/269 (95%), Positives = 264/269 (98%)
 Frame = +3

Query: 33   QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPECQSK 212
            QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC KCG VLGPFFQNSYSEVKVGSCPECQSK
Sbjct: 277  QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCGKCGAVLGPFFQNSYSEVKVGSCPECQSK 336

Query: 213  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 392
            GPFTVNIEQTIYRN+QKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTG+Y
Sbjct: 337  GPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGVY 396

Query: 393  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPTIGERIF 572
            TNNFDLSLNTKNGFPVF+TVVEANYVTKKQDLFSAYKLT+EDK+EIENL KDP IGERI 
Sbjct: 397  TNNFDLSLNTKNGFPVFSTVVEANYVTKKQDLFSAYKLTQEDKEEIENLGKDPRIGERII 456

Query: 573  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 752
            KSIAPSIYGH+DIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK
Sbjct: 457  KSIAPSIYGHDDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 516

Query: 753  TGQRAVYTTGKGASAVGLTAAVHKDPITK 839
            TGQRAVYTTGKGASAVGLTAAVHKDP+T+
Sbjct: 517  TGQRAVYTTGKGASAVGLTAAVHKDPVTR 545


>ref|XP_004137663.1| PREDICTED: DNA replication licensing factor mcm2-like [Cucumis
            sativus] gi|449497179|ref|XP_004160335.1| PREDICTED: DNA
            replication licensing factor mcm2-like [Cucumis sativus]
          Length = 944

 Score =  522 bits (1345), Expect = e-146
 Identities = 253/269 (94%), Positives = 265/269 (98%)
 Frame = +3

Query: 33   QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPECQSK 212
            QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCGT+LGPFFQNSYSEVKVGSCPECQSK
Sbjct: 333  QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSK 392

Query: 213  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 392
            GPFTVN+EQT+YRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY
Sbjct: 393  GPFTVNVEQTVYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 452

Query: 393  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPTIGERIF 572
            TNNFDLSLNTKNGFPVF+TVVEANY+TKKQDLFSAYK+T+EDK+EIE L+KDP IGERI 
Sbjct: 453  TNNFDLSLNTKNGFPVFSTVVEANYITKKQDLFSAYKITQEDKEEIEKLAKDPRIGERII 512

Query: 573  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 752
            KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK
Sbjct: 513  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 572

Query: 753  TGQRAVYTTGKGASAVGLTAAVHKDPITK 839
            TG RAVYTTGKGASAVGLTAAVHKDP+T+
Sbjct: 573  TGHRAVYTTGKGASAVGLTAAVHKDPVTR 601


>dbj|BAC53939.1| MCM protein-like protein [Nicotiana tabacum]
          Length = 865

 Score =  522 bits (1345), Expect = e-146
 Identities = 253/269 (94%), Positives = 265/269 (98%)
 Frame = +3

Query: 33   QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPECQSK 212
            QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCG +LGPFFQNSYSEVKVGSCPECQSK
Sbjct: 253  QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAILGPFFQNSYSEVKVGSCPECQSK 312

Query: 213  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 392
            GPFTVN+EQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTG+Y
Sbjct: 313  GPFTVNVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGVY 372

Query: 393  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPTIGERIF 572
            TNNFDLSLNTKNGFPVFATV+EANYVTKKQDLFSAYKLT+EDK+EIE L+KDP IGERI 
Sbjct: 373  TNNFDLSLNTKNGFPVFATVIEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIS 432

Query: 573  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 752
            KSIAPSIYGHEDIKTA+ALAMFGGQEKNVEGKHRLRGDIN+LLLGDPGTAKSQFLKYVEK
Sbjct: 433  KSIAPSIYGHEDIKTALALAMFGGQEKNVEGKHRLRGDINILLLGDPGTAKSQFLKYVEK 492

Query: 753  TGQRAVYTTGKGASAVGLTAAVHKDPITK 839
            TGQRAVYTTGKGASAVGLTAAVHKDP+T+
Sbjct: 493  TGQRAVYTTGKGASAVGLTAAVHKDPVTR 521


>ref|XP_002273675.1| PREDICTED: DNA replication licensing factor mcm2 [Vitis vinifera]
            gi|296085553|emb|CBI29285.3| unnamed protein product
            [Vitis vinifera]
          Length = 954

 Score =  522 bits (1345), Expect = e-146
 Identities = 256/269 (95%), Positives = 265/269 (98%)
 Frame = +3

Query: 33   QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPECQSK 212
            QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCG +LGPFFQNSYSEVKVGSCPECQSK
Sbjct: 343  QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGMILGPFFQNSYSEVKVGSCPECQSK 402

Query: 213  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 392
            GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY
Sbjct: 403  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 462

Query: 393  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPTIGERIF 572
            TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLT+EDK+EIE L+KDP IGERI 
Sbjct: 463  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIV 522

Query: 573  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 752
            KSIAPSIYGHEDIKTA+ALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK
Sbjct: 523  KSIAPSIYGHEDIKTAMALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 582

Query: 753  TGQRAVYTTGKGASAVGLTAAVHKDPITK 839
            TGQRAVYTTGKGASAVGLTA+VHKDP+T+
Sbjct: 583  TGQRAVYTTGKGASAVGLTASVHKDPVTR 611


>emb|CAN78904.1| hypothetical protein VITISV_022714 [Vitis vinifera]
          Length = 833

 Score =  522 bits (1345), Expect = e-146
 Identities = 256/269 (95%), Positives = 265/269 (98%)
 Frame = +3

Query: 33   QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYSEVKVGSCPECQSK 212
            QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDC+KCG +LGPFFQNSYSEVKVGSCPECQSK
Sbjct: 235  QIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGMILGPFFQNSYSEVKVGSCPECQSK 294

Query: 213  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 392
            GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY
Sbjct: 295  GPFTVNIEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIY 354

Query: 393  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTEEDKKEIENLSKDPTIGERIF 572
            TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLT+EDK+EIE L+KDP IGERI 
Sbjct: 355  TNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIV 414

Query: 573  KSIAPSIYGHEDIKTAIALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 752
            KSIAPSIYGHEDIKTA+ALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK
Sbjct: 415  KSIAPSIYGHEDIKTAMALAMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEK 474

Query: 753  TGQRAVYTTGKGASAVGLTAAVHKDPITK 839
            TGQRAVYTTGKGASAVGLTA+VHKDP+T+
Sbjct: 475  TGQRAVYTTGKGASAVGLTASVHKDPVTR 503


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