BLASTX nr result
ID: Coptis23_contig00001308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001308
(1692 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|2... 395 e-172
ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] ... 392 e-166
ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arab... 392 e-166
gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis th... 392 e-165
ref|XP_003527986.1| PREDICTED: soluble starch synthase, chloropl... 393 e-165
>ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1|
predicted protein [Populus trichocarpa]
Length = 649
Score = 395 bits (1014), Expect(2) = e-172
Identities = 184/232 (79%), Positives = 208/232 (89%)
Frame = -3
Query: 697 KYRPYGVYKDARSILVIHNLAHQGVEAGITYKNLGLPLDWYGALGWVFPTWARLHALDTG 518
KYRPYGVYKDAR+ILVIHNLAHQGVE TY NLGLP +WYGALGWVFPTWAR HALDTG
Sbjct: 298 KYRPYGVYKDARTILVIHNLAHQGVEPAATYTNLGLPSEWYGALGWVFPTWARTHALDTG 357
Query: 517 EAVNILKGAVVTADRILTVSEGYSWEITTPEGGYGLNELLSSRKIVLNGITNGIDVDEWD 338
EAVN+LKGA+VT DRILTVS+GY+WEITT EGGYGL+ELLSSR+ VLNGITNGID+ EW+
Sbjct: 358 EAVNLLKGAIVTVDRILTVSKGYAWEITTVEGGYGLHELLSSRRSVLNGITNGIDIYEWN 417
Query: 337 PTSDKLIDFQYSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAM 158
P+SDK I YS+DDLSGKV+CK ALQKELGLP++PDCP+IGF+GRLDYQKG DLI+ A
Sbjct: 418 PSSDKHIASNYSVDDLSGKVQCKIALQKELGLPIKPDCPLIGFIGRLDYQKGIDLIRWAT 477
Query: 157 PDLMRYDVQFVMLGSGDPQTEKWMRASESAYKEKFRGWVGFDVPISHKITAG 2
P+L+ DVQFVMLGSGDP E WMRA+ES YK+KFRGWVGF++PISHKITAG
Sbjct: 478 PELLEDDVQFVMLGSGDPLYEDWMRATESTYKDKFRGWVGFNIPISHKITAG 529
Score = 238 bits (607), Expect(2) = e-172
Identities = 125/210 (59%), Positives = 145/210 (69%), Gaps = 5/210 (2%)
Frame = -2
Query: 1427 SSKDGFSTVEDEK-----GLEVGVGKRNKEEEIGNGRVHLNSQSVGPENKAVVGSSINEV 1263
+SKDG VE+EK GL +G + + IG + + + + V+ S +
Sbjct: 61 NSKDGNFAVENEKKEKRGGLILGPERDSSGSIIGFNLIPPSGMDI---SFTVLESHEDAT 117
Query: 1262 NGRXXXXXXXXXXXKSPTRLTRSIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMV 1083
G K TR+T +IVFVTSEAAPYSKTGGLGDVCGSLPI LAARGHRVMV
Sbjct: 118 TGGTEEAEDIEGVEKVQTRVTYNIVFVTSEAAPYSKTGGLGDVCGSLPIVLAARGHRVMV 177
Query: 1082 VSPRYVNGGPLDKNCDAAIDLNCRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPG 903
VSPRY++G P DKN A +L+C IK+ CFGG EV+FFHEYR GVDWVFVDHPSYHRPG
Sbjct: 178 VSPRYLHGSPADKNFAGASELDCHIKVYCFGGEQEVAFFHEYREGVDWVFVDHPSYHRPG 237
Query: 902 NPYGDINGAYGDNQFRFTLLCHAACEAPLV 813
NPYGD GA+GDNQFRF LLCHAACEAPLV
Sbjct: 238 NPYGDSRGAFGDNQFRFALLCHAACEAPLV 267
>ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana]
gi|334187896|ref|NP_001190378.1| soluble starch synthase
[Arabidopsis thaliana]
gi|29337131|sp|Q9FNF2.1|SSY1_ARATH RecName: Full=Starch
synthase 1, chloroplastic/amyloplastic; Short=AtSS1;
Short=SSS; AltName: Full=Soluble starch synthase I;
Flags: Precursor gi|10177090|dbj|BAB10396.1| soluble
starch synthase [Arabidopsis thaliana]
gi|22135791|gb|AAM91082.1| AT5g24300/MOP9_12
[Arabidopsis thaliana] gi|110742056|dbj|BAE98960.1|
soluble starch synthase [Arabidopsis thaliana]
gi|332005899|gb|AED93282.1| soluble starch synthase
[Arabidopsis thaliana] gi|332005900|gb|AED93283.1|
soluble starch synthase [Arabidopsis thaliana]
Length = 652
Score = 392 bits (1007), Expect(2) = e-166
Identities = 179/232 (77%), Positives = 208/232 (89%)
Frame = -3
Query: 697 KYRPYGVYKDARSILVIHNLAHQGVEAGITYKNLGLPLDWYGALGWVFPTWARLHALDTG 518
KYRPYGVYKDARSIL+IHNLAHQGVE TY NLGLP +WYGA+GWVFPTWAR HALDTG
Sbjct: 301 KYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTG 360
Query: 517 EAVNILKGAVVTADRILTVSEGYSWEITTPEGGYGLNELLSSRKIVLNGITNGIDVDEWD 338
EAVN+LKGA+VT+DRI+TVS+GY+WEITT EGGYGL +LLSSRK V+NGITNGI+VDEW+
Sbjct: 361 EAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWN 420
Query: 337 PTSDKLIDFQYSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAM 158
P++D+ I F YS DD+S K+KCK ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A
Sbjct: 421 PSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAG 480
Query: 157 PDLMRYDVQFVMLGSGDPQTEKWMRASESAYKEKFRGWVGFDVPISHKITAG 2
PDLM D+QFVMLGSGDP+ E WMR+ E Y++KFRGWVGF+VPISH+ITAG
Sbjct: 481 PDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAG 532
Score = 221 bits (563), Expect(2) = e-166
Identities = 102/131 (77%), Positives = 111/131 (84%)
Frame = -2
Query: 1205 LTRSIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCDAAI 1026
+ ++VFVTSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG DKN A
Sbjct: 140 VVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAK 199
Query: 1025 DLNCRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTL 846
DL R+ + CFGG EVSF+HEYR GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTL
Sbjct: 200 DLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTL 259
Query: 845 LCHAACEAPLV 813
LCHAACEAPLV
Sbjct: 260 LCHAACEAPLV 270
>ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp.
lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein
ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 392 bits (1007), Expect(2) = e-166
Identities = 180/232 (77%), Positives = 207/232 (89%)
Frame = -3
Query: 697 KYRPYGVYKDARSILVIHNLAHQGVEAGITYKNLGLPLDWYGALGWVFPTWARLHALDTG 518
KYRPYGVYKDARSIL+IHNLAHQGVE TY NLGLP +WYGA+GWVFPTWAR HALDTG
Sbjct: 304 KYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTG 363
Query: 517 EAVNILKGAVVTADRILTVSEGYSWEITTPEGGYGLNELLSSRKIVLNGITNGIDVDEWD 338
EAVN+LKGA+VT+DRI+TVS+GY+WEITT EGGYGL +LLSSRK V+NGITNGI+VDEW+
Sbjct: 364 EAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWN 423
Query: 337 PTSDKLIDFQYSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAM 158
P++D+ I F YS DD S KVKCK ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A
Sbjct: 424 PSTDEHIPFHYSADDFSEKVKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAG 483
Query: 157 PDLMRYDVQFVMLGSGDPQTEKWMRASESAYKEKFRGWVGFDVPISHKITAG 2
PDLM D+QFVMLGSGDP+ E WMR+ E Y++KFRGWVGF+VPISH+ITAG
Sbjct: 484 PDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAG 535
Score = 220 bits (560), Expect(2) = e-166
Identities = 103/131 (78%), Positives = 110/131 (83%)
Frame = -2
Query: 1205 LTRSIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCDAAI 1026
+ ++VFVTSEAAPYSKTGGLGDVCGSLPIALA RGHRVMVVSPRY+NG D N A
Sbjct: 143 VVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVVSPRYLNGTAADNNYARAK 202
Query: 1025 DLNCRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTL 846
DL RI + CFGG EVSF+HEYR GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTL
Sbjct: 203 DLGIRITVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTL 262
Query: 845 LCHAACEAPLV 813
LCHAACEAPLV
Sbjct: 263 LCHAACEAPLV 273
>gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis thaliana]
Length = 575
Score = 392 bits (1007), Expect(2) = e-165
Identities = 179/232 (77%), Positives = 208/232 (89%)
Frame = -3
Query: 697 KYRPYGVYKDARSILVIHNLAHQGVEAGITYKNLGLPLDWYGALGWVFPTWARLHALDTG 518
KYRPYGVYKDARSIL+IHNLAHQGVE TY NLGLP +WYGA+GWVFPTWAR HALDTG
Sbjct: 224 KYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTG 283
Query: 517 EAVNILKGAVVTADRILTVSEGYSWEITTPEGGYGLNELLSSRKIVLNGITNGIDVDEWD 338
EAVN+LKGA+VT+DRI+TVS+GY+WEITT EGGYGL +LLSSRK V+NGITNGI+VDEW+
Sbjct: 284 EAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWN 343
Query: 337 PTSDKLIDFQYSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAM 158
P++D+ I F YS DD+S K+KCK ALQKELGLP+RP+CPMIGF+GRLDYQKG DLIQ+A
Sbjct: 344 PSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAG 403
Query: 157 PDLMRYDVQFVMLGSGDPQTEKWMRASESAYKEKFRGWVGFDVPISHKITAG 2
PDLM D+QFVMLGSGDP+ E WMR+ E Y++KFRGWVGF+VPISH+ITAG
Sbjct: 404 PDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAG 455
Score = 219 bits (558), Expect(2) = e-165
Identities = 101/131 (77%), Positives = 111/131 (84%)
Frame = -2
Query: 1205 LTRSIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCDAAI 1026
+ ++VFVTSEAAPYSKTGGLGDVCGSLPIALA RGHRVMV+SPRY+NG DKN A
Sbjct: 63 VVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAK 122
Query: 1025 DLNCRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRFTL 846
DL R+ + CFGG EVSF+HE+R GVDWVFVDH SYHRPGNPYGD GA+GDNQFRFTL
Sbjct: 123 DLGIRVTVNCFGGSQEVSFYHEHRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTL 182
Query: 845 LCHAACEAPLV 813
LCHAACEAPLV
Sbjct: 183 LCHAACEAPLV 193
>ref|XP_003527986.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like
[Glycine max]
Length = 647
Score = 393 bits (1010), Expect(2) = e-165
Identities = 187/232 (80%), Positives = 207/232 (89%)
Frame = -3
Query: 697 KYRPYGVYKDARSILVIHNLAHQGVEAGITYKNLGLPLDWYGALGWVFPTWARLHALDTG 518
KYRP+GVYKDARSILVIHN+AHQGVE ITY NLGLP +WYGALGWVFPTWAR HALDTG
Sbjct: 298 KYRPHGVYKDARSILVIHNIAHQGVEPAITYSNLGLPPEWYGALGWVFPTWARTHALDTG 357
Query: 517 EAVNILKGAVVTADRILTVSEGYSWEITTPEGGYGLNELLSSRKIVLNGITNGIDVDEWD 338
EAVN LKGAVVT+DRI+TVS+GYSWEITT EGG GL++LLSSRK +L+GITNGIDV EWD
Sbjct: 358 EAVNFLKGAVVTSDRIVTVSKGYSWEITTSEGGCGLHDLLSSRKSILSGITNGIDVTEWD 417
Query: 337 PTSDKLIDFQYSIDDLSGKVKCKTALQKELGLPVRPDCPMIGFVGRLDYQKGTDLIQSAM 158
P+ DK I YS DDLSGK +CK +LQKELGLPVRPDCPMIGF+GRLDYQKG DLI+ AM
Sbjct: 418 PSCDKHIASNYSADDLSGKAECKISLQKELGLPVRPDCPMIGFIGRLDYQKGIDLIRLAM 477
Query: 157 PDLMRYDVQFVMLGSGDPQTEKWMRASESAYKEKFRGWVGFDVPISHKITAG 2
P+LM DVQFVMLGSG+P E WMRA+ESAYK+KFRGWVGF+VPISHKITAG
Sbjct: 478 PELMEADVQFVMLGSGNPIYEDWMRATESAYKDKFRGWVGFNVPISHKITAG 529
Score = 217 bits (553), Expect(2) = e-165
Identities = 99/133 (74%), Positives = 112/133 (84%)
Frame = -2
Query: 1211 TRLTRSIVFVTSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYVNGGPLDKNCDA 1032
TR++ +IVFVTSEAAPYSKTGGL DVCGSLPIALA RGHRVMVV+PRY++G P D
Sbjct: 135 TRVSHNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVVTPRYIHGTPEDLKFAG 194
Query: 1031 AIDLNCRIKIPCFGGLHEVSFFHEYRAGVDWVFVDHPSYHRPGNPYGDINGAYGDNQFRF 852
A+DL+ K+ CFGG E+ F+HEYR GVDWVFVDHPS+HRPGNPYGD G +GDNQFRF
Sbjct: 195 AVDLDQSTKVFCFGGAQEIGFYHEYREGVDWVFVDHPSFHRPGNPYGDTFGTFGDNQFRF 254
Query: 851 TLLCHAACEAPLV 813
TLLCHAACEAPLV
Sbjct: 255 TLLCHAACEAPLV 267