BLASTX nr result

ID: Coptis23_contig00001295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001295
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250...   381   e-103
emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]   381   e-103
ref|XP_002527964.1| conserved hypothetical protein [Ricinus comm...   375   e-102
ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|2...   367   1e-99
emb|CBI20773.3| unnamed protein product [Vitis vinifera]              367   2e-99

>ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250872 [Vitis vinifera]
          Length = 321

 Score =  381 bits (979), Expect = e-103
 Identities = 178/263 (67%), Positives = 204/263 (77%), Gaps = 6/263 (2%)
 Frame = +3

Query: 3   CPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAHGMSADVKDPSPSDTR 182
           CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCL+RFK A+GMS+++K PS SD  
Sbjct: 32  CPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLERFKSAYGMSSELKSPSTSDAD 91

Query: 183 SQEG------NPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCCEEAHCAFIG 344
           +         N    S  +  PTCPLCRGEVTGWIV+++AR  L++K RCC E  CAF+G
Sbjct: 92  ADAAAAASAENIQQLSEDSCRPTCPLCRGEVTGWIVVDKAREQLDEKKRCCAEERCAFMG 151

Query: 345 NYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPHGVVLGDYVI 524
            YLEL++HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP GVVLGDYVI
Sbjct: 152 TYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVI 211

Query: 525 EYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXXXQRPSYDAS 704
           EYG+++  DEFEDFPGDEGNWWTSCILYQVFDNF                  +R SYD S
Sbjct: 212 EYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRARVSDARRGSRRSSYDTS 271

Query: 705 NSDEGSVTSVDIAEYRVDDNDVE 773
           NSDEGSVTSV+  EYR D+ D E
Sbjct: 272 NSDEGSVTSVEFPEYRADETDDE 294


>emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]
          Length = 325

 Score =  381 bits (978), Expect = e-103
 Identities = 179/267 (67%), Positives = 204/267 (76%), Gaps = 10/267 (3%)
 Frame = +3

Query: 3   CPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAHGMSADVKDPSPSDTR 182
           CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCLDRFK A+GMS+++K PS SD  
Sbjct: 32  CPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLDRFKSAYGMSSELKSPSTSDAD 91

Query: 183 SQEG----------NPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCCEEAHC 332
           +             N    S  +  PTCPLCRGEVTGWIV+++AR  L++K RCC E  C
Sbjct: 92  ADADAEAAAAASAENIQQLSEDSCRPTCPLCRGEVTGWIVVDKAREQLDEKKRCCAEERC 151

Query: 333 AFIGNYLELQDHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPHGVVLG 512
           AF+G YLEL++HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP GVVLG
Sbjct: 152 AFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLG 211

Query: 513 DYVIEYGENDMQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXXXQRPS 692
           DYVIEYG+++  DEFEDFPGDEGNWWTSCILYQVFDNF                  +R S
Sbjct: 212 DYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRSRVSDARRGSRRSS 271

Query: 693 YDASNSDEGSVTSVDIAEYRVDDNDVE 773
           YD SNSDEGSVTSV+  EYR D+ D E
Sbjct: 272 YDTSNSDEGSVTSVEFPEYRADETDDE 298


>ref|XP_002527964.1| conserved hypothetical protein [Ricinus communis]
           gi|223532590|gb|EEF34376.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 311

 Score =  375 bits (964), Expect = e-102
 Identities = 176/258 (68%), Positives = 197/258 (76%)
 Frame = +3

Query: 3   CPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAHGMSADVKDPSPSDTR 182
           CPICLDFPHN VLLQCSSY+ GCRPF+CDTDH HSNCLDRFK A GMS+    PS SD  
Sbjct: 32  CPICLDFPHNSVLLQCSSYEKGCRPFVCDTDHLHSNCLDRFKSASGMSS----PSTSDAT 87

Query: 183 SQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCCEEAHCAFIGNYLELQ 362
           +      +   GN+   CPLCRGEV+GW+ + +AR HL++K RCCEE  C F G YLEL 
Sbjct: 88  TTANTQHSVVDGNSRLACPLCRGEVSGWVAIEKARVHLDEKKRCCEEEQCTFTGTYLELC 147

Query: 363 DHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPHGVVLGDYVIEYGEND 542
            HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP GVVLGDYVIEYG++D
Sbjct: 148 KHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDD 207

Query: 543 MQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXXXQRPSYDASNSDEGS 722
             DEFEDFPGDEGNWWTSCILYQVFDNF                  +R SYD SNSDEGS
Sbjct: 208 TVDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRSRVTDTRRGSRRMSYDNSNSDEGS 267

Query: 723 VTSVDIAEYRVDDNDVEF 776
           VTSV+ AEYR+D+ D EF
Sbjct: 268 VTSVEFAEYRLDETDDEF 285


>ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|222872612|gb|EEF09743.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  367 bits (943), Expect = 1e-99
 Identities = 170/258 (65%), Positives = 194/258 (75%)
 Frame = +3

Query: 3   CPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAHGMSADVKDPSPSDTR 182
           CPICLDFPHN VLLQCSSYD GC+PF+CDTDH HSNCL RFK A G+S+    PS SD  
Sbjct: 32  CPICLDFPHNCVLLQCSSYDKGCQPFVCDTDHLHSNCLGRFKSASGLSS----PSTSDPT 87

Query: 183 SQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCCEEAHCAFIGNYLELQ 362
                    +  N+   CPLCRGEV GW+V+++AR HL++K RCC E  C F+G Y EL 
Sbjct: 88  PATNTQPAVADSNSKLVCPLCRGEVIGWVVVDKARLHLDEKKRCCAEEQCTFMGTYFELH 147

Query: 363 DHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPHGVVLGDYVIEYGEND 542
           +HA+++HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP G+VLGDYVIEYG++D
Sbjct: 148 EHAQIEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGIVLGDYVIEYGDDD 207

Query: 543 MQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXXXQRPSYDASNSDEGS 722
             DEFEDFPGDEGNWWTSCILYQVFDNF                  +  SYD SNSDEGS
Sbjct: 208 TGDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRARIADTRRGSRHSSYDTSNSDEGS 267

Query: 723 VTSVDIAEYRVDDNDVEF 776
           VTSVD AEYR+D+ D EF
Sbjct: 268 VTSVDFAEYRLDETDDEF 285


>emb|CBI20773.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  367 bits (942), Expect = 2e-99
 Identities = 172/257 (66%), Positives = 195/257 (75%)
 Frame = +3

Query: 3   CPICLDFPHNGVLLQCSSYDNGCRPFMCDTDHTHSNCLDRFKMAHGMSADVKDPSPSDTR 182
           CPICLDFPHNGVLLQCSSY+ GCRPF+CDTDH HSNCL+RFK A+GMS+D +        
Sbjct: 32  CPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLERFKSAYGMSSDCR-------- 83

Query: 183 SQEGNPSTESHGNAPPTCPLCRGEVTGWIVLNEARAHLNKKTRCCEEAHCAFIGNYLELQ 362
                          PTCPLCRGEVTGWIV+++AR  L++K RCC E  CAF+G YLEL+
Sbjct: 84  ---------------PTCPLCRGEVTGWIVVDKAREQLDEKKRCCAEERCAFMGTYLELR 128

Query: 363 DHAKLKHPHARPSKIDPARQLDWDNFQQSSEIIDVLSTIHSEVPHGVVLGDYVIEYGEND 542
           +HA+L+HPHARPSKIDPARQLDW+NFQQSSEIIDVLSTIHSEVP GVVLGDYVIEYG+++
Sbjct: 129 NHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDE 188

Query: 543 MQDEFEDFPGDEGNWWTSCILYQVFDNFXXXXXXXXXXXXXXXXXXQRPSYDASNSDEGS 722
             DEFEDFPGDEGNWWTSCILYQVFDNF                  +R SYD SNSDEGS
Sbjct: 189 TGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRARVSDARRGSRRSSYDTSNSDEGS 248

Query: 723 VTSVDIAEYRVDDNDVE 773
           VTSV+  EYR D+ D E
Sbjct: 249 VTSVEFPEYRADETDDE 265


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