BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001294
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   213   8e-53
emb|CBI17088.3| unnamed protein product [Vitis vinifera]              195   2e-47
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   195   2e-47
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       179   1e-42
ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus co...   177   6e-42

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  213 bits (542), Expect = 8e-53
 Identities = 125/287 (43%), Positives = 164/287 (57%), Gaps = 9/287 (3%)
 Frame = -3

Query: 1187 VLCLSNACLGEVKKTKGSHRARIFLTVNDQKLVIGTISHEK-PQISYEMKIPEDFELSHD 1011
            +L LS A LGE KK KG+    +FL ++ QKLV+GT+     PQ+S+++   ++FELSH+
Sbjct: 23   ILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLLPANIPQLSFDLVFDKEFELSHN 82

Query: 1010 WKNGSIYFTGYKSLMSDGSYEDHTDCDHDAGCDHPVAATENGKPEPKNEKSNI------S 849
            WKNGS++F GYKS++ D       D D D+  D PV A ENGKPEPK E++        +
Sbjct: 83   WKNGSVFFMGYKSVLPDEEEFSEFD-DSDSEEDLPVNAIENGKPEPKVEQAKAVPTNANA 141

Query: 848  TQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXGQIDFSGVXXXXXXXXXXXXXX 669
             + K+ + EP K                            I                   
Sbjct: 142  GKAKVKVEEPPKDAKDEEDDDDDSDEDMVDEDSDEDSDEDI---------MSDAEDGSDE 192

Query: 668  XXXXXXXETPKKVL--GTKRPAQSASKTPIPEKKAKLLTPQKTGPEGKKVGGHTATPHPS 495
                   ETPKK +  G KRP +SA+KTP+P KKAKL++PQKT  +GKK G HTATPHP+
Sbjct: 193  GSESEDEETPKKKVEPGKKRPTESATKTPVPAKKAKLVSPQKT--DGKKGGAHTATPHPN 250

Query: 494  KKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKTKH 354
            KK+GKT  + D  K ++PKS GQ+ CKSCSKTFNS+ ALQSHSK KH
Sbjct: 251  KKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKH 297


>emb|CBI17088.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  195 bits (496), Expect = 2e-47
 Identities = 128/340 (37%), Positives = 168/340 (49%), Gaps = 62/340 (18%)
 Frame = -3

Query: 1187 VLCLSNACLGEVKKTKGSHRARIFLTVNDQKLVIGTISHEK-PQISYEMKIPEDFELSHD 1011
            +L LS A LGE KK KG+    +FL ++ QKLV+GT+     PQ+S+++   ++FELSH+
Sbjct: 23   ILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLLPANIPQLSFDLVFDKEFELSHN 82

Query: 1010 WKNGSIYFTGYKSLMSDGSYEDH----------------------TDC------------ 933
            WKNGS++F GYKS++ D  Y  H                      T+C            
Sbjct: 83   WKNGSVFFMGYKSVLPD-EYPYHFSFFDFVLCLPIIYLFCVFIYATNCISFLFNFILREA 141

Query: 932  -------------------DHDAGCDHPVAATENGKPEPKNEKSNI------STQIKLTI 828
                               D D+  D PV A ENGKPEPK E++        + + K+ +
Sbjct: 142  FSLTIFRLLIATEEFSEFDDSDSEEDLPVNAIENGKPEPKVEQAKAVPTNANAGKAKVKV 201

Query: 827  REPNKXXXXXXXXXXXXXXXXXXXXXXXXXXGQIDFSGVXXXXXXXXXXXXXXXXXXXXX 648
             EP K                            I                          
Sbjct: 202  EEPPKDAKDEEDDDDDSDEDMVDEDSDEDSDEDI---------MSDAEDGSDEGSESEDE 252

Query: 647  ETPKKVL--GTKRPAQSASKTPIPEKKAKLLTPQKTGPEGKKVGGHTATPHPSKKSGKTS 474
            ETPKK +  G KRP +SA+KTP+P KKAKL++PQKT  +GKK G HTATPHP+KK+GKT 
Sbjct: 253  ETPKKKVEPGKKRPTESATKTPVPAKKAKLVSPQKT--DGKKGGAHTATPHPNKKAGKTP 310

Query: 473  INNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKTKH 354
             + D  K ++PKS GQ+ CKSCSKTFNS+ ALQSHSK KH
Sbjct: 311  ASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSKAKH 350


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  195 bits (495), Expect = 2e-47
 Identities = 115/296 (38%), Positives = 156/296 (52%), Gaps = 10/296 (3%)
 Frame = -3

Query: 1199 GAGAVLCLSNACLGEVKKTKGSHRARIFLTVNDQKLVIGTISHEK-PQISYEMKIPEDFE 1023
            G   ++ +S A LGE+KK KG+    ++  +  QKLV+GT+S EK PQIS+++   + FE
Sbjct: 19   GDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLSAEKFPQISFDLVFEKKFE 78

Query: 1022 LSHDWKNGSIYFTGYKSLMSDGSYEDHTDCDHDAGCDHPVAATENGKPEP-KNEK--SNI 852
            LSH+WKNGS+YF GYK+ + D   E   D  H+   D       NGKP+  K EK  S  
Sbjct: 79   LSHNWKNGSVYFCGYKAAIPDSDSEFEIDLPHNTTVD-------NGKPQQLKQEKPESAA 131

Query: 851  STQIKLT-----IREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXGQIDFSGVXXXXXXXX 687
            + Q+K+       + P +                               S          
Sbjct: 132  AKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSEDEDMVNDRSASSEDEDDDENE 191

Query: 686  XXXXXXXXXXXXXETPKKV-LGTKRPAQSASKTPIPEKKAKLLTPQKTGPEGKKVGGHTA 510
                         ETPKK     KRP +S SKTP+P+KKAK +TPQKTG + KK GGH A
Sbjct: 192  DNEDDKNEISKKKETPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTGDDDKKSGGHVA 251

Query: 509  TPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKTKHSEDK 342
            TP+PSK++GKT  N +  KQ+  KS G   CKSC+++FNS+ ALQSH+K KH+  K
Sbjct: 252  TPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAKHTAAK 307


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  179 bits (455), Expect = 1e-42
 Identities = 117/289 (40%), Positives = 151/289 (52%), Gaps = 3/289 (1%)
 Frame = -3

Query: 1199 GAGAVLCLSNACLGEVKKTKGSHRARIFLTVNDQKLVIGTISHEK-PQISYEMKIPEDFE 1023
            G   VL LS A LGE KK KGS    + + V+ +KL +GT++ +K PQ  +++    DFE
Sbjct: 19   GDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLNLDKLPQQQFDLVFDRDFE 78

Query: 1022 LSHDWKNGSIYFTGYKSLMSDGSYEDHTDCDHDAGCDHPVAATENGKPEPK-NEKSNIST 846
            LSH+WKNGS+YF GYK+       ED  + D +     P+     GK E K +   + S 
Sbjct: 79   LSHNWKNGSVYFFGYKAANPYEQEEDEDESDEEI----PLTLANTGKSEAKASANDSASG 134

Query: 845  QIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXGQIDFSGVXXXXXXXXXXXXXXX 666
            + K+ I EP+K                             D S                 
Sbjct: 135  KQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDSD---------------- 178

Query: 665  XXXXXXETPKKVLGTK-RPAQSASKTPIPEKKAKLLTPQKTGPEGKKVGGHTATPHPSKK 489
                  ETPKK   +K RP+ SA KTP P+KKAK  TPQKT  +GKK   H ATPHPSK+
Sbjct: 179  EDQSDEETPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKT--DGKKGAVHVATPHPSKQ 236

Query: 488  SGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKTKHSEDK 342
            +GKTS N  N   +TPKS G + CK+CS+TF S+TAL+SHSK KHS  K
Sbjct: 237  AGKTSGNKSN---QTPKSGGSLACKTCSRTFGSETALESHSKAKHSVGK 282


>ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus communis]
            gi|223531978|gb|EEF33790.1| Histone deacetylase 2a,
            putative [Ricinus communis]
          Length = 287

 Score =  177 bits (448), Expect = 6e-42
 Identities = 110/288 (38%), Positives = 153/288 (53%), Gaps = 5/288 (1%)
 Frame = -3

Query: 1199 GAGAVLCLSNACLGEVKKTKGSHRARIFLTVNDQKLVIGTISHEK-PQISYEMKIPEDFE 1023
            G G  L LS ACLGEVKK KG+    + + +ND+K+V+GT+S EK P +S+++   ++FE
Sbjct: 34   GGGFALHLSQACLGEVKKNKGNEPVFVSVKINDKKIVLGTLSCEKFPHLSFDLIFDQNFE 93

Query: 1022 LSHDWKNGSIYFTGYKSLMSDGSYEDHTDCDHDAGCDHPVAATENGKPEPKNEKS---NI 852
            LSH+WK+GS+YF+                       + P   +E  KP+P+ EK+   + 
Sbjct: 94   LSHNWKHGSVYFS-----------------------EKP--GSETKKPQPETEKAKPDST 128

Query: 851  STQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXGQIDFSGVXXXXXXXXXXXXX 672
             ++ K+ I EP K                           ++ + G              
Sbjct: 129  GSKQKVKIAEPKKDEKPDNDSDDSTADEDESFDEDDSSDDKVLYDG------EDEDSDES 182

Query: 671  XXXXXXXXETPKKV-LGTKRPAQSASKTPIPEKKAKLLTPQKTGPEGKKVGGHTATPHPS 495
                    ETPK +  G KRPA+SA KTP+P+KK KL+TPQKT  +GKK  GH ATPHPS
Sbjct: 183  DDSSDEDEETPKTIEKGKKRPAESAKKTPLPDKKVKLVTPQKT--DGKKASGHVATPHPS 240

Query: 494  KKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKTKHS 351
            KK  KT  ++D  K++T KS    PC SC++ F S+ ALQSHSK KHS
Sbjct: 241  KKILKTPASSDQKKEQTQKS---FPCTSCNRAFGSEAALQSHSKAKHS 285