BLASTX nr result

ID: Coptis23_contig00001289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001289
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis...   397   e-108
ref|XP_002526431.1| protein with unknown function [Ricinus commu...   393   e-107
ref|XP_002328719.1| predicted protein [Populus trichocarpa] gi|1...   389   e-106
ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [...   380   e-103
ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [...   376   e-102

>ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
           gi|297739506|emb|CBI29688.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score =  397 bits (1021), Expect = e-108
 Identities = 200/214 (93%), Positives = 206/214 (96%)
 Frame = +2

Query: 110 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 289
           MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 290 IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 469
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 470 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAINVEKAFQTILGEIYRIISKK 649
           MLIGNKTDLKHLR VATEDAQ +AEKEGLSFIETSALEA NVEKAFQTILGEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKK 180

Query: 650 TLSSDEPAPTSIKEGKTLVVEGSEANTKKPCCSS 751
           TLSSD+PAP  IKEGKTLVV+GS+ NTKK CCSS
Sbjct: 181 TLSSDDPAPAGIKEGKTLVVDGSDTNTKKTCCSS 214


>ref|XP_002526431.1| protein with unknown function [Ricinus communis]
           gi|223534211|gb|EEF35926.1| protein with unknown
           function [Ricinus communis]
          Length = 215

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/215 (91%), Positives = 207/215 (96%)
 Frame = +2

Query: 110 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 289
           MARR DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 290 IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 469
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD+NIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120

Query: 470 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAINVEKAFQTILGEIYRIISKK 649
           MLIGNKTDLKHLR VATEDAQ YAE+EGLSFIETSALEA NVEKAFQTIL EIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 650 TLSSDEPAPTSIKEGKTLVVEGSEANTKKPCCSST 754
           +L+S+EPAP +IKEGK +VV GSEANTKKPCCSS+
Sbjct: 181 SLTSEEPAPANIKEGKMIVVGGSEANTKKPCCSSS 215


>ref|XP_002328719.1| predicted protein [Populus trichocarpa] gi|118484335|gb|ABK94045.1|
           unknown [Populus trichocarpa]
           gi|222839017|gb|EEE77368.1| predicted protein [Populus
           trichocarpa]
          Length = 215

 Score =  389 bits (999), Expect = e-106
 Identities = 196/215 (91%), Positives = 206/215 (95%)
 Frame = +2

Query: 110 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 289
           MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 290 IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 469
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 470 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAINVEKAFQTILGEIYRIISKK 649
           MLIGNKTDLKHLR VATEDAQSYAEKEGL+FIETSALEA NVEKAFQTIL EIYRI+SKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKK 180

Query: 650 TLSSDEPAPTSIKEGKTLVVEGSEANTKKPCCSST 754
           +LSS+E AP SIK+GKT+VV G E +TKK CCSS+
Sbjct: 181 SLSSEESAPASIKDGKTIVVGGPEPDTKKTCCSSS 215


>ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
          Length = 216

 Score =  380 bits (975), Expect = e-103
 Identities = 194/216 (89%), Positives = 205/216 (94%), Gaps = 1/216 (0%)
 Frame = +2

Query: 110 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 289
           MARR D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 290 IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 469
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 470 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAINVEKAFQTILGEIYRIISKK 649
           MLIGNKTDLKHLR VATEDAQSYAEKEGLSFIETSALEA NVEKAFQTIL EIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 650 TLSSDEP-APTSIKEGKTLVVEGSEANTKKPCCSST 754
           +L+S+EP A  +IKEGKT+VV  SEANTKK CCSS+
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216


>ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
          Length = 220

 Score =  376 bits (966), Expect = e-102
 Identities = 192/213 (90%), Positives = 202/213 (94%), Gaps = 1/213 (0%)
 Frame = +2

Query: 110 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 289
           MARR D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 290 IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 469
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 470 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEAINVEKAFQTILGEIYRIISKK 649
           MLIGNKTDLKHLR VATEDAQSYAEKEGLSFIETSALEA NVEKAFQTIL EIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 650 TLSSDEP-APTSIKEGKTLVVEGSEANTKKPCC 745
           +L+S+EP A  +IKEGKT+VV  SEANTKK CC
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACC 213


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