BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001288
         (1814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278444.1| PREDICTED: formate dehydrogenase, mitochondr...   679   0.0  
emb|CAN71454.1| hypothetical protein VITISV_036417 [Vitis vinifera]   676   0.0  
sp|Q07511.2|FDH_SOLTU RecName: Full=Formate dehydrogenase, mitoc...   665   0.0  
ref|NP_001234857.1| formate dehydrogenase [Solanum lycopersicum]...   663   0.0  
ref|XP_004141089.1| PREDICTED: formate dehydrogenase, mitochondr...   657   0.0  

>ref|XP_002278444.1| PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
            gi|296087673|emb|CBI34929.3| unnamed protein product
            [Vitis vinifera]
          Length = 383

 Score =  679 bits (1752), Expect = 0.0
 Identities = 330/383 (86%), Positives = 350/383 (91%), Gaps = 1/383 (0%)
 Frame = -2

Query: 1510 MAMKKAAIFGAQTLFG-SPVSSPFARHLHASSGSKKIVGVFYKANEYAAMNPDFVGCAEN 1334
            MAM K     A   F     S    +HLHAS+GSKKIVGVFYKANEYAAMNP+FVGC E 
Sbjct: 1    MAMMKRVAESAVRAFALGSTSGALTKHLHASAGSKKIVGVFYKANEYAAMNPNFVGCVEG 60

Query: 1333 ALGIRDWLESKGHEYIVTDDKEGPNCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ 1154
            ALGIRDWLES+GH+YIVTDDKEGP+CELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ
Sbjct: 61   ALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ 120

Query: 1153 LLLTAGIGSDHIDLKXXXXAGLTVAEITGSNTVSVAEDELMRVLLLVRNFLPGHHQVING 974
            LLLTAGIGSDHIDLK    AGLTVAE+TGSN VSVAEDELMR+L+LVRNFLPGHHQVI+G
Sbjct: 121  LLLTAGIGSDHIDLKAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISG 180

Query: 973  EWNVAAICYRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRIKMDPDTESQIGA 794
            EWNVA I YRAYDLEGKTVGTVGAGRIG+LLLQRLKPFNCNLLYHDRIKMDP+ E+QIGA
Sbjct: 181  EWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRIKMDPELENQIGA 240

Query: 793  KFEEDLDAMLPKCDIIVMNMPLTEKTKGMFNKERIAKCKKGVLIVNNARGALMDTQAIAD 614
            KFEED+D MLPKCDIIV+NMPLTEKTKGMFNKERIAK KKGVLIVNNARGA+MDTQA+AD
Sbjct: 241  KFEEDVDVMLPKCDIIVINMPLTEKTKGMFNKERIAKLKKGVLIVNNARGAIMDTQAVAD 300

Query: 613  ACTSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHTSGTTIDGQLRYAAGTKDMLDRY 434
            AC+SGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPH SGTTID QLRYAAG KDMLDRY
Sbjct: 301  ACSSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGVKDMLDRY 360

Query: 433  FKGEDFPAQNYIVKEGQLASQYR 365
            FKGEDFPAQ+YIVKEGQLASQY+
Sbjct: 361  FKGEDFPAQHYIVKEGQLASQYQ 383


>emb|CAN71454.1| hypothetical protein VITISV_036417 [Vitis vinifera]
          Length = 383

 Score =  676 bits (1745), Expect = 0.0
 Identities = 329/383 (85%), Positives = 349/383 (91%), Gaps = 1/383 (0%)
 Frame = -2

Query: 1510 MAMKKAAIFGAQTLFG-SPVSSPFARHLHASSGSKKIVGVFYKANEYAAMNPDFVGCAEN 1334
            MAM K     A   F     S    +HLHAS+GSKKIVGVFYKANEYAAMNP+FVGC E 
Sbjct: 1    MAMMKRVAESAVRAFALGSTSGALTKHLHASAGSKKIVGVFYKANEYAAMNPNFVGCVEG 60

Query: 1333 ALGIRDWLESKGHEYIVTDDKEGPNCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ 1154
            ALGIR WLES+GH+YIVTDDKEGP+CELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ
Sbjct: 61   ALGIRXWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQ 120

Query: 1153 LLLTAGIGSDHIDLKXXXXAGLTVAEITGSNTVSVAEDELMRVLLLVRNFLPGHHQVING 974
            LLLTAGIGSDHIDLK    AGLTVAE+TGSN VSVAEDELMR+L+LVRNFLPGHHQVI+G
Sbjct: 121  LLLTAGIGSDHIDLKAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISG 180

Query: 973  EWNVAAICYRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRIKMDPDTESQIGA 794
            EWNVA I YRAYDLEGKTVGTVGAGRIG+LLLQRLKPFNCNLLYHDRIKMDP+ E+QIGA
Sbjct: 181  EWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRIKMDPELENQIGA 240

Query: 793  KFEEDLDAMLPKCDIIVMNMPLTEKTKGMFNKERIAKCKKGVLIVNNARGALMDTQAIAD 614
            KFEED+D MLPKCDIIV+NMPLTEKTKGMFNKERIAK KKGVLIVNNARGA+MDTQA+AD
Sbjct: 241  KFEEDVDVMLPKCDIIVINMPLTEKTKGMFNKERIAKLKKGVLIVNNARGAIMDTQAVAD 300

Query: 613  ACTSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHTSGTTIDGQLRYAAGTKDMLDRY 434
            AC+SGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPH SGTTID QLRYAAG KDMLDRY
Sbjct: 301  ACSSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGVKDMLDRY 360

Query: 433  FKGEDFPAQNYIVKEGQLASQYR 365
            FKGEDFPAQ+YIVKEGQLASQY+
Sbjct: 361  FKGEDFPAQHYIVKEGQLASQYQ 383


>sp|Q07511.2|FDH_SOLTU RecName: Full=Formate dehydrogenase, mitochondrial; AltName:
            Full=NAD-dependent formate dehydrogenase; Short=FDH;
            Flags: Precursor gi|11991527|emb|CAA79702.2|
            mitochondrial formate dehydrogenase precursor [Solanum
            tuberosum]
          Length = 381

 Score =  665 bits (1717), Expect = 0.0
 Identities = 323/382 (84%), Positives = 348/382 (91%)
 Frame = -2

Query: 1510 MAMKKAAIFGAQTLFGSPVSSPFARHLHASSGSKKIVGVFYKANEYAAMNPDFVGCAENA 1331
            MAM + A   A+ +  SP S  F R L AS G KKIVGVFYKANEYA MNP+F+GCAENA
Sbjct: 1    MAMSRVASTAARAIT-SPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENA 59

Query: 1330 LGIRDWLESKGHEYIVTDDKEGPNCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL 1151
            LGIR+WLESKGH+YIVT DKEGP+CELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL
Sbjct: 60   LGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL 119

Query: 1150 LLTAGIGSDHIDLKXXXXAGLTVAEITGSNTVSVAEDELMRVLLLVRNFLPGHHQVINGE 971
            LLTAGIGSDH+DLK    AGLTVAE+TGSNTVSVAEDELMR+L+LVRNFLPGHHQVINGE
Sbjct: 120  LLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGE 179

Query: 970  WNVAAICYRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRIKMDPDTESQIGAK 791
            WNVAAI +RAYDLEGKTVGTVGAGRIG+LLLQRLKPFNCNLLYHDR+KMD + E+QIGAK
Sbjct: 180  WNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAK 239

Query: 790  FEEDLDAMLPKCDIIVMNMPLTEKTKGMFNKERIAKCKKGVLIVNNARGALMDTQAIADA 611
            FEEDLD ML KCDI+V+N PLTEKTKGMF+KERIAK KKGVLIVNNARGA+MDTQA+ DA
Sbjct: 240  FEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDA 299

Query: 610  CTSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHTSGTTIDGQLRYAAGTKDMLDRYF 431
            C SGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPH SGTTID QLRYAAGTKDMLDRYF
Sbjct: 300  CNSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYF 359

Query: 430  KGEDFPAQNYIVKEGQLASQYR 365
            KGEDFPA+NYIVK+G+LA QYR
Sbjct: 360  KGEDFPAENYIVKDGELAPQYR 381


>ref|NP_001234857.1| formate dehydrogenase [Solanum lycopersicum]
            gi|56562181|emb|CAH60893.1| formate dehydrogenase
            [Solanum lycopersicum]
          Length = 381

 Score =  663 bits (1711), Expect = 0.0
 Identities = 322/382 (84%), Positives = 348/382 (91%)
 Frame = -2

Query: 1510 MAMKKAAIFGAQTLFGSPVSSPFARHLHASSGSKKIVGVFYKANEYAAMNPDFVGCAENA 1331
            MAM++ A   A+ +  SP S  F R L AS G KKIVGVFYKANEYA MNP+F+GCAENA
Sbjct: 1    MAMRRVASTAARAI-ASPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENA 59

Query: 1330 LGIRDWLESKGHEYIVTDDKEGPNCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL 1151
            LGIR+WLESKGH+YIVT DKEGP+CELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL
Sbjct: 60   LGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQL 119

Query: 1150 LLTAGIGSDHIDLKXXXXAGLTVAEITGSNTVSVAEDELMRVLLLVRNFLPGHHQVINGE 971
            LLTAGIGSDH+DLK    AGLTVAE+TGSNTVSVAEDELMR+L+LVRNFLPGHHQVINGE
Sbjct: 120  LLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGE 179

Query: 970  WNVAAICYRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRIKMDPDTESQIGAK 791
            WNVAAI +RAYDLEGKTVGTVGAGRIG+LLLQRLKPFNCNLLYHDR+KMD + E+QIGAK
Sbjct: 180  WNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAK 239

Query: 790  FEEDLDAMLPKCDIIVMNMPLTEKTKGMFNKERIAKCKKGVLIVNNARGALMDTQAIADA 611
            FEEDLD ML KCDI+V+N PLTEKTKGMF+KERIAK KKGVLIVNNARGA+MDTQA+ DA
Sbjct: 240  FEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDA 299

Query: 610  CTSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHTSGTTIDGQLRYAAGTKDMLDRYF 431
            C SGHIAGYSGDVWYPQPAPKDH WRYMPNQAMTPH SGTTID QLRYAAGTKDMLDRYF
Sbjct: 300  CNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYF 359

Query: 430  KGEDFPAQNYIVKEGQLASQYR 365
            KGEDFPA+NYIVK+G+LA QYR
Sbjct: 360  KGEDFPAENYIVKDGELAPQYR 381


>ref|XP_004141089.1| PREDICTED: formate dehydrogenase, mitochondrial-like [Cucumis
            sativus]
          Length = 384

 Score =  657 bits (1694), Expect = 0.0
 Identities = 316/384 (82%), Positives = 347/384 (90%), Gaps = 2/384 (0%)
 Frame = -2

Query: 1510 MAMKKAAIFGAQTLFGSPVS--SPFARHLHASSGSKKIVGVFYKANEYAAMNPDFVGCAE 1337
            MAMK+AA    + L  S  S  SP  RHLHAS+ SKKIVGVFYKANEYAAMNP+FVGC E
Sbjct: 1    MAMKQAATTAIRALSSSLTSHSSPLLRHLHASAESKKIVGVFYKANEYAAMNPNFVGCVE 60

Query: 1336 NALGIRDWLESKGHEYIVTDDKEGPNCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNL 1157
             ALGIR+WLES+GHEYIVTDDKEG + ELEKHIPDLHVLI+TPFHPAYVTAERIKKAKNL
Sbjct: 61   GALGIREWLESQGHEYIVTDDKEGLDSELEKHIPDLHVLITTPFHPAYVTAERIKKAKNL 120

Query: 1156 QLLLTAGIGSDHIDLKXXXXAGLTVAEITGSNTVSVAEDELMRVLLLVRNFLPGHHQVIN 977
            +LLLTAGIGSDH+DL     AGLTVAE+TGSN VSVAEDELMR+L+LVRNFLPG+HQV+N
Sbjct: 121  KLLLTAGIGSDHVDLNAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGYHQVVN 180

Query: 976  GEWNVAAICYRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRIKMDPDTESQIG 797
            GEWNVA I +RAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDR+K+DP+ E QIG
Sbjct: 181  GEWNVAGIAHRAYDLEGKTVGTVGAGRIGKLLLQRLKPFNCNLLYHDRLKIDPELEKQIG 240

Query: 796  AKFEEDLDAMLPKCDIIVMNMPLTEKTKGMFNKERIAKCKKGVLIVNNARGALMDTQAIA 617
            A+FEEDLDAMLPKCD++V+N PLT+KT+G+FNKERIAKCKKGVLIVNNARGA+MDTQA+ 
Sbjct: 241  AQFEEDLDAMLPKCDVLVINTPLTDKTRGLFNKERIAKCKKGVLIVNNARGAIMDTQAVV 300

Query: 616  DACTSGHIAGYSGDVWYPQPAPKDHPWRYMPNQAMTPHTSGTTIDGQLRYAAGTKDMLDR 437
            DAC SGH+ GYSGDVW PQPAPKDHPWRYMPNQAMTPH SGTTID QLRYAAG KDML+R
Sbjct: 301  DACNSGHVGGYSGDVWNPQPAPKDHPWRYMPNQAMTPHISGTTIDAQLRYAAGVKDMLER 360

Query: 436  YFKGEDFPAQNYIVKEGQLASQYR 365
            YFKGE+FPAQNYIVKEGQLA QYR
Sbjct: 361  YFKGEEFPAQNYIVKEGQLAPQYR 384