BLASTX nr result

ID: Coptis23_contig00001269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001269
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001053268.1| Os04g0508100 [Oryza sativa Japonica Group] g...    62   2e-07
ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp....    62   3e-07
gb|AAM65026.1| unknown [Arabidopsis thaliana]                          62   3e-07
ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana] ...    62   3e-07
emb|CAB81918.1| putative protein [Arabidopsis thaliana]                62   3e-07

>ref|NP_001053268.1| Os04g0508100 [Oryza sativa Japonica Group]
           gi|32489524|emb|CAE04727.1| OSJNBa0043L24.15 [Oryza
           sativa Japonica Group] gi|113564839|dbj|BAF15182.1|
           Os04g0508100 [Oryza sativa Japonica Group]
           gi|116310769|emb|CAH67562.1| OSIGBa0101P20.5 [Oryza
           sativa Indica Group]
          Length = 71

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +1

Query: 97  MVGGGTLLQRAMSYVVDKVVVDTLANSHTFQRFAVRTSKGLENVSKRLGDV 249
           M GGG L  R +SYVV++ +V+ LAN+ TFQRFAVRT+K LEN+S +  +V
Sbjct: 1   MAGGGNLFGRVLSYVVNEFIVEGLANNRTFQRFAVRTNKSLENLSSKAKEV 51


>ref|XP_002870927.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316764|gb|EFH47186.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 72

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 97  MVGGGTLLQRAMSYVVDKVVVDTLANSHTFQRFAVRTSKGLENVSK 234
           M GGG  + R +SYV ++ +V+ LANSH FQRFAVRTSK +EN+SK
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK 46


>gb|AAM65026.1| unknown [Arabidopsis thaliana]
          Length = 72

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 97  MVGGGTLLQRAMSYVVDKVVVDTLANSHTFQRFAVRTSKGLENVSK 234
           M GGG  + R +SYV ++ +V+ LANSH FQRFAVRTSK +EN+SK
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK 46


>ref|NP_568088.1| uncharacterized protein [Arabidopsis thaliana]
           gi|14030733|gb|AAK53041.1|AF375457_1 AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|15010720|gb|AAK74019.1|
           AT5g01350/T10O8_60 [Arabidopsis thaliana]
           gi|16974531|gb|AAL31175.1| AT5g01350/T10O8_60
           [Arabidopsis thaliana] gi|110741284|dbj|BAF02192.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332002947|gb|AED90330.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 72

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 97  MVGGGTLLQRAMSYVVDKVVVDTLANSHTFQRFAVRTSKGLENVSK 234
           M GGG  + R +SYV ++ +V+ LANSH FQRFAVRTSK +EN+SK
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK 46


>emb|CAB81918.1| putative protein [Arabidopsis thaliana]
          Length = 92

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 97  MVGGGTLLQRAMSYVVDKVVVDTLANSHTFQRFAVRTSKGLENVSK 234
           M GGG  + R +SYV ++ +V+ LANSH FQRFAVRTSK +EN+SK
Sbjct: 1   MAGGGNFIARVISYVANEFIVNGLANSHAFQRFAVRTSKRIENLSK 46


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