BLASTX nr result
ID: Coptis23_contig00001249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001249
(1625 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 840 0.0
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ... 823 0.0
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 818 0.0
ref|XP_002322430.1| predicted protein [Populus trichocarpa] gi|2... 811 0.0
ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|2... 809 0.0
>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
vinifera]
Length = 711
Score = 840 bits (2171), Expect = 0.0
Identities = 421/541 (77%), Positives = 471/541 (87%)
Frame = +1
Query: 1 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 180
NA+S FRIS PLRE LKSKGIEALFPIQAMTFDT+LDGSDLVGRARTGQGKTLAFVLPIL
Sbjct: 119 NALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPIL 178
Query: 181 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 360
ESLINGP + SRKTGYGR P VLVLLPTRELA QV+ DF VYGGA+GL +CCLYGG+PY
Sbjct: 179 ESLINGPNRGSRKTGYGRPPCVLVLLPTRELATQVYADFDVYGGAIGLTSCCLYGGAPYQ 238
Query: 361 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 540
QE LKRGVD+V+GTPGRIKDH+ERGN+D SSLKFRVLDEADEMLRMGFV+DVELILGK
Sbjct: 239 AQEIKLKRGVDIVVGTPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGK 298
Query: 541 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 720
V+D++KVQTLLFSATLP WV+ IS RFLKP KTADLVGNEKMKASTNVRHI+LPCSS+A
Sbjct: 299 VEDVSKVQTLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSA 358
Query: 721 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSAREVTLKGFRSG 900
SQ+IPD+IRCYSSGGRTIIFTE KDSASEL+GLLP ARA HGDIQQS REVTL GFRSG
Sbjct: 359 RSQVIPDVIRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSG 418
Query: 901 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1080
KF+TLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGN+G+AVML+DPR S
Sbjct: 419 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFDPRRS 478
Query: 1081 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1260
N+S+IE+ESGVKFEHVSAPQPAD+AK+ G +AA TIT VSDS+IP F
Sbjct: 479 NISKIERESGVKFEHVSAPQPADIAKSAGVEAAGTITQVSDSVIPAFKSAAEELLNTSGL 538
Query: 1261 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1440
+GYTEIK+RSLL S++N+VTV LEAGKP++TPSFA+ ++RRFLPE+K
Sbjct: 539 SAVELLAKALAKASGYTEIKSRSLLASLDNHVTVLLEAGKPIYTPSFAYGVLRRFLPEDK 598
Query: 1441 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQERADSRGGRF 1620
V+S+KGL LTADG GAVFDV + D+D+FLAGQENAA+VS+EVLK LP LQER SRGGRF
Sbjct: 599 VDSIKGLALTADGNGAVFDVATEDLDAFLAGQENAANVSLEVLKALPRLQERDQSRGGRF 658
Query: 1621 G 1623
G
Sbjct: 659 G 659
>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 690
Score = 823 bits (2126), Expect = 0.0
Identities = 411/541 (75%), Positives = 474/541 (87%)
Frame = +1
Query: 1 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 180
NA+SK+RIS LRE LKSKGI++LFPIQAMTFD +LDGSDLVGRARTGQGKTLAFVLPIL
Sbjct: 105 NAISKYRISESLREKLKSKGIQSLFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPIL 164
Query: 181 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 360
ES+ NG AK SRKTGYGR P+VLVLLPTRELA+QV DDFKVYG ++GL +CCLYGG+ Y+
Sbjct: 165 ESITNGHAKESRKTGYGRPPSVLVLLPTRELASQVFDDFKVYGESLGLTSCCLYGGASYH 224
Query: 361 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 540
PQE +LKRGVD+V+GTPGR+KDH+ERGN++LS LKFRVLDEADEMLRMGFV+DVELILGK
Sbjct: 225 PQEMSLKRGVDIVVGTPGRVKDHIERGNINLSYLKFRVLDEADEMLRMGFVEDVELILGK 284
Query: 541 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 720
V+D++KVQTLLFSATLP WV+ IS RFLK +KKT DLVGNEKMKASTNVRHIILPCS++A
Sbjct: 285 VEDVSKVQTLLFSATLPEWVKQISSRFLKASKKTIDLVGNEKMKASTNVRHIILPCSASA 344
Query: 721 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSAREVTLKGFRSG 900
I Q+IPDIIRCYSSGGRTIIFTEK++SA+EL+GLL ARA HG+IQQS REVTL GFRSG
Sbjct: 345 IPQVIPDIIRCYSSGGRTIIFTEKRESANELAGLLHGARALHGEIQQSQREVTLSGFRSG 404
Query: 901 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1080
KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTG+AVMLYDPR S
Sbjct: 405 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRS 464
Query: 1081 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1260
N+S+IE+ESGVKFEH++APQPAD+A+AVG AAE IT VSDS++P F
Sbjct: 465 NISKIERESGVKFEHITAPQPADIAQAVGAVAAEKITQVSDSIVPAFKSAAEDLLNSSGL 524
Query: 1261 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1440
AGYTEIK+RSLL+SMEN+VT+ LEAG+P++TPSFAF ++RRFLPE+K
Sbjct: 525 SAVELLAKALANAAGYTEIKSRSLLSSMENHVTLLLEAGRPIYTPSFAFGVLRRFLPEDK 584
Query: 1441 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQERADSRGGRF 1620
V SVKG+TLTADG GAVFDV + D+D+FLAGQ+NAA+VS+E+LK LPPLQE+ SR GRF
Sbjct: 585 VESVKGMTLTADGKGAVFDVAAADIDTFLAGQDNAANVSLEILKALPPLQEKDQSR-GRF 643
Query: 1621 G 1623
G
Sbjct: 644 G 644
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 818 bits (2113), Expect = 0.0
Identities = 412/541 (76%), Positives = 469/541 (86%)
Frame = +1
Query: 1 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 180
NAVSK RIS PLR LK KGIE+LFPIQAMTFD VLDGSDLVGRARTGQGKTLAFVLPIL
Sbjct: 129 NAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGKTLAFVLPIL 188
Query: 181 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 360
ESLINGP K+SRKTGYGR P+VLVLLPTRELA +VH DF+VYGGA+GL++CCLYGG+PYN
Sbjct: 189 ESLINGPTKSSRKTGYGRTPSVLVLLPTRELACRVHADFEVYGGAMGLSSCCLYGGAPYN 248
Query: 361 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 540
QE L+RGVD+VIGTPGR+KDH+ERGN+DLS LKFRVLDEADEMLRMGFV+DVELILGK
Sbjct: 249 TQEIKLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGK 308
Query: 541 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 720
V+++ KVQTLLFSATLP WV++I+ +FLKP+KKTADLVGN KMKASTNVRHI+LPCS+ A
Sbjct: 309 VENVNKVQTLLFSATLPDWVKHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAPA 368
Query: 721 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSAREVTLKGFRSG 900
SQLIPDIIRCYSSGGRTIIFTE K+SAS+L+GLLP ARA HGDIQQ+ REVTL GFRSG
Sbjct: 369 RSQLIPDIIRCYSSGGRTIIFTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRSG 428
Query: 901 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1080
KF+TLVATNVAARGLDINDVQLIIQCE PR+VE+YIHRSGRTGRAGNTG+A LYDP+ S
Sbjct: 429 KFMTLVATNVAARGLDINDVQLIIQCEFPREVESYIHRSGRTGRAGNTGVAGTLYDPKRS 488
Query: 1081 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1260
N+S+IE+ESGVKFEH+SAP+P D+AKAVG +AAE IT VSDS+IP F
Sbjct: 489 NISKIERESGVKFEHISAPRPDDIAKAVGGEAAEMITQVSDSVIPAFKETAEELLKSSGL 548
Query: 1261 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1440
GYTEIK RSLLTSMENYVT+ LE GKP+FTPSFA+ I+RRFLPEEK
Sbjct: 549 TVVELLAKALAKAVGYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAYGILRRFLPEEK 608
Query: 1441 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQERADSRGGRF 1620
V +VKGL+LTADG GAVFDVP+ D++++L+GQENAA+VS+EVLK LP LQ+R SRGGRF
Sbjct: 609 VEAVKGLSLTADGNGAVFDVPAEDLNTYLSGQENAANVSLEVLKALPRLQQRDQSRGGRF 668
Query: 1621 G 1623
G
Sbjct: 669 G 669
>ref|XP_002322430.1| predicted protein [Populus trichocarpa] gi|222869426|gb|EEF06557.1|
predicted protein [Populus trichocarpa]
Length = 657
Score = 811 bits (2096), Expect = 0.0
Identities = 407/541 (75%), Positives = 465/541 (85%)
Frame = +1
Query: 1 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 180
NAV++FRIS PLRE+LK +GIEALFPIQA TF+ +L+G DLVGRARTGQGKTLAFVLPIL
Sbjct: 79 NAVTRFRISEPLREVLKKRGIEALFPIQARTFEDILNGGDLVGRARTGQGKTLAFVLPIL 138
Query: 181 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 360
ESL+NG AKASRKTGYGR P+VLVLLPTRELA QV DDFKVYGGA+GL++CC+YGG+ Y
Sbjct: 139 ESLVNGLAKASRKTGYGRPPSVLVLLPTRELATQVFDDFKVYGGAMGLDSCCVYGGASYQ 198
Query: 361 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 540
PQE ALKRGVDVV+GTPGRIKDH+E+GN+DLS LKFRVLDEADEMLRMGFV+DVELILGK
Sbjct: 199 PQEFALKRGVDVVVGTPGRIKDHIEKGNIDLSLLKFRVLDEADEMLRMGFVEDVELILGK 258
Query: 541 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 720
VKD+ KVQTLLFSATLP WV+ IS +FLKP KKT DLVGNEKMKASTNVRHI+LPCS++A
Sbjct: 259 VKDVNKVQTLLFSATLPGWVKQISSKFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTSA 318
Query: 721 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSAREVTLKGFRSG 900
I Q+IPDIIRCY+SGGRTIIFTEK++SA+ELSGLLP ARA HG+IQQS REVTL GFRSG
Sbjct: 319 IPQVIPDIIRCYASGGRTIIFTEKRESANELSGLLPGARALHGEIQQSQREVTLSGFRSG 378
Query: 901 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1080
KFLTLVATNVAARGLDINDVQLIIQCEPP DVEAYIHRSGRTGRAGN+G+AVMLYDPR S
Sbjct: 379 KFLTLVATNVAARGLDINDVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRS 438
Query: 1081 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1260
N+S+I++ESGVKFEH++AP+ D+AKAVG +AAETI VSDS+IP F
Sbjct: 439 NISKIQRESGVKFEHITAPKAEDIAKAVGVEAAETIIQVSDSVIPAFKSAAEDLLNTSGL 498
Query: 1261 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1440
GYTEIK+RSLL+SMEN+VT+ LE+GKP++TPSFAFS++RR LPE+K
Sbjct: 499 SAVELLAKALAKATGYTEIKSRSLLSSMENHVTLLLESGKPIYTPSFAFSVLRRILPEDK 558
Query: 1441 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQERADSRGGRF 1620
V SV G+TLT DG GAVFDV DVD+FLA QEN A V++EV+KTLP LQER R GRF
Sbjct: 559 VESVTGMTLTTDGNGAVFDVKKEDVDAFLAAQENGAGVNIEVVKTLPSLQEREQQR-GRF 617
Query: 1621 G 1623
G
Sbjct: 618 G 618
>ref|XP_002318863.1| predicted protein [Populus trichocarpa] gi|222859536|gb|EEE97083.1|
predicted protein [Populus trichocarpa]
Length = 652
Score = 809 bits (2089), Expect = 0.0
Identities = 405/541 (74%), Positives = 463/541 (85%)
Frame = +1
Query: 1 NAVSKFRISAPLREMLKSKGIEALFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 180
NAV++FRIS PLRE LK +GIEALFPIQA TF+ +L+G DLVGRARTGQGKTLAFVLPIL
Sbjct: 63 NAVTRFRISEPLREALKKRGIEALFPIQARTFEDILNGCDLVGRARTGQGKTLAFVLPIL 122
Query: 181 ESLINGPAKASRKTGYGRAPTVLVLLPTRELANQVHDDFKVYGGAVGLNACCLYGGSPYN 360
ESL+NGPAKASRKTGYGR P+VLVLLPTRELA QV +DFKVYGGAVGLN+CC+YGG+ Y
Sbjct: 123 ESLVNGPAKASRKTGYGRPPSVLVLLPTRELATQVFEDFKVYGGAVGLNSCCVYGGASYQ 182
Query: 361 PQESALKRGVDVVIGTPGRIKDHLERGNLDLSSLKFRVLDEADEMLRMGFVDDVELILGK 540
PQE ALKRGVD+V+GTPGRIKDH+E+GN+DLS LKFRVLDE+DEMLRMGFV+DVELILGK
Sbjct: 183 PQEFALKRGVDIVVGTPGRIKDHIEKGNIDLSLLKFRVLDESDEMLRMGFVEDVELILGK 242
Query: 541 VKDLTKVQTLLFSATLPSWVQNISKRFLKPNKKTADLVGNEKMKASTNVRHIILPCSSNA 720
V+D+ KVQTLLFSATLP WV+NIS RFLKP KKT DLVGNEKMKASTNVRHI+LPCS+ A
Sbjct: 243 VEDVRKVQTLLFSATLPDWVKNISSRFLKPTKKTIDLVGNEKMKASTNVRHIVLPCSTAA 302
Query: 721 ISQLIPDIIRCYSSGGRTIIFTEKKDSASELSGLLPDARAFHGDIQQSAREVTLKGFRSG 900
+ Q+IPD+I CY SGGRTIIFTEK++SA+EL+GLLP ARA HG+IQQS REVTL GFRSG
Sbjct: 303 MPQVIPDVISCYGSGGRTIIFTEKRESANELAGLLPGARALHGEIQQSKREVTLSGFRSG 362
Query: 901 KFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRSS 1080
KFLTLVATNVAARGLDINDVQLIIQCEPP DVEAYIHRSGRTGRAGN+G+AVMLYDPR S
Sbjct: 363 KFLTLVATNVAARGLDINDVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYDPRRS 422
Query: 1081 NVSRIEKESGVKFEHVSAPQPADVAKAVGFDAAETITNVSDSLIPIFXXXXXXXXXXXXX 1260
N+S+I++ESGVKFEH++AP+ D+AKA G AAETIT VSDS+IP F
Sbjct: 423 NISKIQRESGVKFEHITAPRAEDIAKAAGVGAAETITQVSDSVIPAFKSAAENLLSTSGL 482
Query: 1261 XXXXXXXXXXXXTAGYTEIKNRSLLTSMENYVTVQLEAGKPVFTPSFAFSIMRRFLPEEK 1440
GYTEIK+RSLLTSM+N+VT+ LE+GKP++TPSFAFS+MRR LPE+K
Sbjct: 483 SAVELLAKALAKATGYTEIKSRSLLTSMDNHVTLLLESGKPIYTPSFAFSVMRRILPEDK 542
Query: 1441 VNSVKGLTLTADGMGAVFDVPSGDVDSFLAGQENAADVSMEVLKTLPPLQERADSRGGRF 1620
V SV G++LTADG GAVFDV DVD+FLA QENAA V++EV+K LP LQER D GRF
Sbjct: 543 VESVTGMSLTADGNGAVFDVKKEDVDTFLAAQENAAGVNIEVVKALPSLQER-DRPRGRF 601
Query: 1621 G 1623
G
Sbjct: 602 G 602