BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001248
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein co...   157   1e-36
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c...   156   2e-36
emb|CBI25589.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   156   2e-36

>ref|XP_002532501.1| 116 kD U5 small nuclear ribonucleoprotein component, putative
           [Ricinus communis] gi|223527776|gb|EEF29877.1| 116 kD U5
           small nuclear ribonucleoprotein component, putative
           [Ricinus communis]
          Length = 992

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query: 2   CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGIVSIDWNRKTIGEFFQTKY 181
           CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENG+VSIDWNRK +G+FF+TKY
Sbjct: 682 CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWNRKALGDFFKTKY 741

Query: 182 DWDLLAARSIWAFGPDK 232
           DWDLLAARSIWAFGPDK
Sbjct: 742 DWDLLAARSIWAFGPDK 758


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
           predicted protein [Populus trichocarpa]
          Length = 869

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query: 2   CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGIVSIDWNRKTIGEFFQTKY 181
           CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENG+VSIDWNRK +G+FF+TKY
Sbjct: 628 CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWNRKALGDFFKTKY 687

Query: 182 DWDLLAARSIWAFGPDK 232
           DWDLLAARSIWAFGPDK
Sbjct: 688 DWDLLAARSIWAFGPDK 704


>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
           truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
           nuclear ribonucleoprotein component [Medicago
           truncatula]
          Length = 983

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = +2

Query: 2   CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGIVSIDWNRKTIGEFFQTKY 181
           CETVVESSSMKCFAETPNKKNKITMIAEPLE+GLAEDIENG+VS DWNRK +GEFFQTKY
Sbjct: 678 CETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSTDWNRKKLGEFFQTKY 737

Query: 182 DWDLLAARSIWAFGPDK 232
           DWDLLAARSIWAFGPDK
Sbjct: 738 DWDLLAARSIWAFGPDK 754


>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query: 2   CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGIVSIDWNRKTIGEFFQTKY 181
           CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENG+VSIDW+RK +G+FFQTKY
Sbjct: 621 CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGDFFQTKY 680

Query: 182 DWDLLAARSIWAFGPDK 232
           DWDLLAARSIWAFGPDK
Sbjct: 681 DWDLLAARSIWAFGPDK 697


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
           [Vitis vinifera] gi|147858113|emb|CAN81413.1|
           hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  156 bits (394), Expect = 2e-36
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = +2

Query: 2   CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGIVSIDWNRKTIGEFFQTKY 181
           CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENG+VSIDW+RK +G+FFQTKY
Sbjct: 678 CETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGDFFQTKY 737

Query: 182 DWDLLAARSIWAFGPDK 232
           DWDLLAARSIWAFGPDK
Sbjct: 738 DWDLLAARSIWAFGPDK 754