BLASTX nr result

ID: Coptis23_contig00001243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001243
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134014.1| PREDICTED: probable voltage-gated potassium ...   389   e-106
ref|XP_002518142.1| potassium channel beta, putative [Ricinus co...   385   e-105
ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium ...   383   e-104
ref|XP_003555713.1| PREDICTED: probable voltage-gated potassium ...   382   e-104
ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104

>ref|XP_004134014.1| PREDICTED: probable voltage-gated potassium channel subunit
           beta-like [Cucumis sativus]
           gi|449487512|ref|XP_004157663.1| PREDICTED: probable
           voltage-gated potassium channel subunit beta-like
           [Cucumis sativus]
          Length = 328

 Score =  389 bits (1000), Expect = e-106
 Identities = 182/196 (92%), Positives = 193/196 (98%)
 Frame = -3

Query: 590 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 411
           MQYKNLGRSGLKVSQLSYGAWVSFGNQLDV+EAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1   MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVREAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 410 EIMGQAIRELGWKRSDVVISTKLFWGGPGPNDKGLSRKHIVEGTKACLKRLEMEYVDLIY 231
           EIMGQAIRELGWKRSD+V+STK+FWGGPGPNDKGLSRKHIVEGTKA LKRL+MEYVD+IY
Sbjct: 61  EIMGQAIRELGWKRSDIVVSTKIFWGGPGPNDKGLSRKHIVEGTKASLKRLDMEYVDVIY 120

Query: 230 CHRPDISTPIEETVRAMNYVIDQGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 51
           CHRPD STPIEETVRAMNYVID+GWAFYWGTSEWSAQQITEAWG+A+RLDLVGPIVEQPE
Sbjct: 121 CHRPDSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIADRLDLVGPIVEQPE 180

Query: 50  YNLLNRHKVESEYLSL 3
           YNLL+RHKVESE+L L
Sbjct: 181 YNLLSRHKVESEFLPL 196


>ref|XP_002518142.1| potassium channel beta, putative [Ricinus communis]
           gi|223542738|gb|EEF44275.1| potassium channel beta,
           putative [Ricinus communis]
          Length = 328

 Score =  385 bits (989), Expect = e-105
 Identities = 180/196 (91%), Positives = 191/196 (97%)
 Frame = -3

Query: 590 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 411
           MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1   MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 410 EIMGQAIRELGWKRSDVVISTKLFWGGPGPNDKGLSRKHIVEGTKACLKRLEMEYVDLIY 231
           EIMGQAIRELGWKRSD+V+STK+FWGG GPNDKGLSRKHIVEGTKA LKRL+M+YVD+IY
Sbjct: 61  EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIY 120

Query: 230 CHRPDISTPIEETVRAMNYVIDQGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 51
           CHRPD STPIEET+RAMN+VID+GWAFYWGTSEWSAQQITEAWG+A RLDLVGPIVEQPE
Sbjct: 121 CHRPDSSTPIEETIRAMNHVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180

Query: 50  YNLLNRHKVESEYLSL 3
           YNLL+RHKVESEYL L
Sbjct: 181 YNLLSRHKVESEYLPL 196


>ref|XP_002285645.1| PREDICTED: probable voltage-gated potassium channel subunit beta
           [Vitis vinifera]
          Length = 328

 Score =  383 bits (983), Expect = e-104
 Identities = 181/196 (92%), Positives = 189/196 (96%)
 Frame = -3

Query: 590 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 411
           MQY+NLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRD+GVNFFDNAEVYANGRAE
Sbjct: 1   MQYRNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDNGVNFFDNAEVYANGRAE 60

Query: 410 EIMGQAIRELGWKRSDVVISTKLFWGGPGPNDKGLSRKHIVEGTKACLKRLEMEYVDLIY 231
           EIMGQAIRELGWKRSDVV+STK+FWGG GPNDKGLSRKHI+EGTKA LKRL+MEYVD+IY
Sbjct: 61  EIMGQAIRELGWKRSDVVVSTKIFWGGSGPNDKGLSRKHIIEGTKASLKRLDMEYVDVIY 120

Query: 230 CHRPDISTPIEETVRAMNYVIDQGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 51
           CHRPD STPIEETVRAMNYVID GWAFYWGTSEWSAQQITEAWGVA RLDLVGPIVEQPE
Sbjct: 121 CHRPDSSTPIEETVRAMNYVIDHGWAFYWGTSEWSAQQITEAWGVAERLDLVGPIVEQPE 180

Query: 50  YNLLNRHKVESEYLSL 3
           YNLL+RHKVE EYL L
Sbjct: 181 YNLLSRHKVECEYLPL 196


>ref|XP_003555713.1| PREDICTED: probable voltage-gated potassium channel subunit
           beta-like [Glycine max]
          Length = 328

 Score =  382 bits (982), Expect = e-104
 Identities = 179/196 (91%), Positives = 190/196 (96%)
 Frame = -3

Query: 590 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 411
           MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAK+LLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1   MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKALLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 410 EIMGQAIRELGWKRSDVVISTKLFWGGPGPNDKGLSRKHIVEGTKACLKRLEMEYVDLIY 231
           EIMGQAIRELGWKRSD+V+STK+FWGG GPNDKGLSRKH+VEGTKA LKRLEMEYVD++Y
Sbjct: 61  EIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHVVEGTKASLKRLEMEYVDVLY 120

Query: 230 CHRPDISTPIEETVRAMNYVIDQGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 51
           CHRPD STPIEETVRAMN+VID+GWAFYWGTSEWSAQQITEAW VA RLDLVGPIVEQPE
Sbjct: 121 CHRPDTSTPIEETVRAMNHVIDRGWAFYWGTSEWSAQQITEAWAVAQRLDLVGPIVEQPE 180

Query: 50  YNLLNRHKVESEYLSL 3
           YNLL+RHKVESE+L L
Sbjct: 181 YNLLSRHKVESEFLPL 196


>ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|222846544|gb|EEE84091.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  382 bits (982), Expect = e-104
 Identities = 178/196 (90%), Positives = 190/196 (96%)
 Frame = -3

Query: 590 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 411
           MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE
Sbjct: 1   MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60

Query: 410 EIMGQAIRELGWKRSDVVISTKLFWGGPGPNDKGLSRKHIVEGTKACLKRLEMEYVDLIY 231
           EIMGQAIRELGWKRSD+V+STK+FWGG GPNDKGLSRKHI+EGTKA LKRL+M+YVD+IY
Sbjct: 61  EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIY 120

Query: 230 CHRPDISTPIEETVRAMNYVIDQGWAFYWGTSEWSAQQITEAWGVANRLDLVGPIVEQPE 51
           CHRPD  TPIEETVRAMNYVID+GWAFYWGTSEWSAQQITEAWG+A RLDLVGPIVEQPE
Sbjct: 121 CHRPDTFTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180

Query: 50  YNLLNRHKVESEYLSL 3
           YN+L+RHKVESEY+ L
Sbjct: 181 YNMLSRHKVESEYVPL 196


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