BLASTX nr result
ID: Coptis23_contig00001242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001242
(2050 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512226.1| transcription factor, putative [Ricinus comm... 384 e-104
ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|2... 378 e-102
ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL... 365 2e-98
emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera] 347 5e-93
ref|XP_003591003.1| Trihelix transcription factor [Medicago trun... 329 2e-87
>ref|XP_002512226.1| transcription factor, putative [Ricinus communis]
gi|223548187|gb|EEF49678.1| transcription factor,
putative [Ricinus communis]
Length = 634
Score = 384 bits (987), Expect = e-104
Identities = 261/656 (39%), Positives = 350/656 (53%), Gaps = 82/656 (12%)
Frame = +1
Query: 142 MFNGVPEQFHQFIASRSAXXXXXXXXXXXXFS-----------VHELQPSNQVFQSSH-- 282
MF GVP+QFHQFIASR++ S H + + S H
Sbjct: 1 MFEGVPDQFHQFIASRTSSLPLPVSFPPLHGSSTSSNTSFSSFYHPYTTATTITNSHHNQ 60
Query: 283 --------LLHPLHRQHSTH----EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVL 426
LH LH HS+H E+KEED VA +L+IE RS E ++PW +EVL
Sbjct: 61 QVPLQHPNFLHSLH--HSSHPTGKNHEDKEEDSMVAMNLEIERERSIQESVDPWSNDEVL 118
Query: 427 ALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXX-RS 603
ALL IRSS+ F ++ W HVSRKLAELGFKRSAEKCKEKFEE ++ R
Sbjct: 119 ALLRIRSSMENWFPEYTWEHVSRKLAELGFKRSAEKCKEKFEEENRYFNNINYSKNNYRF 178
Query: 604 FNELEALFEDQSHKSVDD--------KMLKSN--EEEKMDVNMEENS-ANETLEN-PVEE 747
F ELE L+ ++++ + KM K++ EE+K++ N+EE+S ++T+ N P EE
Sbjct: 179 FGELEELYNGHNNQNPQEAVAAEKNKKMDKASQKEEDKIEQNVEEDSRVDQTVGNYPTEE 238
Query: 748 --NQYVVXXXXXXXXXIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 918
N V + E+ KGF E ++KIM QQEE+H KLLEDM
Sbjct: 239 DNNGKEVEKSKSKKRKRQIKFEMFKGFCEDIISKIMAQQEEMHNKLLEDMVKRDEEKVAR 298
Query: 919 XXGWKKKEMDFFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXX 1098
WKK+E+D KE+E RAQEQ LA DR++ II FL +F++ +S + + EIL
Sbjct: 299 EEAWKKQEIDRINKELELRAQEQVLAGDRQTAIINFLKKFSSSSSSSSCSSI--EILQHS 356
Query: 1099 XXXXXXXXXXNVLAERTCSVSRAINPNASTSNAIILAKAPQNQNPTSSQHNPKLPNSRIL 1278
A V + NP++S+S +++A P + T++Q P+ P S +
Sbjct: 357 S------------AHDLLKVPNSSNPSSSSS--LVIAHNPNPTSQTNNQSKPEAPTSTRI 402
Query: 1279 EHPPHNPXXXXXXXXXXXXXXXXXXXAPQNPNS--------------------------- 1377
+ APQ P+S
Sbjct: 403 ALGHQDSSPAQAKSKPAKLTSLQEKQAPQIPSSSSFSIATTQNPKLLNSQSNPLAPSSLS 462
Query: 1378 ---------TSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKEST--KAPLWERISQGM 1524
TSN+++D GKRWP+DEV +LINLRC+L S +DKE+T KAPLWERISQGM
Sbjct: 463 NDILYKKPTTSNNKDDLGKRWPKDEVLALINLRCSLCNSNEDKEATTVKAPLWERISQGM 522
Query: 1525 LELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE 1704
LELGYKRSAK+CKEKWENINKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L+ P
Sbjct: 523 LELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSVDSRTCPYFHQLSTLYNQGTLAAP-- 580
Query: 1705 GLENQAHSAEIRTVTPETGVGA---CPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1863
+A ++ PE + + G S+ + NEG+KN+ QAS ++++
Sbjct: 581 --PLEAGKERPQSALPENHTASKLNSSLNNGSSNSTLLGNEGEKNLAQASGFDFEF 634
>ref|XP_002319635.1| predicted protein [Populus trichocarpa] gi|222858011|gb|EEE95558.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 378 bits (970), Expect = e-102
Identities = 256/645 (39%), Positives = 338/645 (52%), Gaps = 71/645 (11%)
Frame = +1
Query: 142 MFNGVPEQFHQFIASRSAXXXXXXXXXXXXFSVHE----------LQPSNQVFQSSHLLH 291
MF GVPEQFHQFIASR+ S QV +LLH
Sbjct: 1 MFEGVPEQFHQFIASRTTSLPPPGLSFPLLQGSSNTTNFPSFYPYTTSSQQVPLQPNLLH 60
Query: 292 P-LHRQHSTHEDEEKEEDRAVAGSLD-IEGMRSASEPMEPWLKEEVLALLTIRSSLGIEF 465
P LH+ T++D EK+E+ VA ++D E RS E + PW +EVLALL IRSS+ F
Sbjct: 61 PILHQGAPTNKDGEKQENNLVAMNMDQFERERSMPELVNPWSNDEVLALLRIRSSMETWF 120
Query: 466 SDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXXR---SFNELEALFE-- 630
+F W HVSRKLAE GFKRSAEKCKEKFEE S+ SF+ELE ++
Sbjct: 121 PEFTWEHVSRKLAEAGFKRSAEKCKEKFEEESRYFNISNINYNKNYRASFSELEEIYHGD 180
Query: 631 ---------DQSHKSVDDKMLKSNEEEKMDVNMEENS-ANETLENPVEENQ----YVVXX 768
+ +K +D + E++KM N+EE + ++T+ N +++ +V
Sbjct: 181 QNPHQEVTAGEKNKKIDKPGTEDEEQDKMRQNLEEETRIDQTVGNQTDQDNNGKLALVEK 240
Query: 769 XXXXXXXIYHQLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWKKKEM 945
+ E+ K E VN +M QQEE+H KLLED+ KK EM
Sbjct: 241 SKSNKRKREKKFEMFKRLCEDIVNTMMAQQEEMHNKLLEDIVKRDEEKVAKEEARKKLEM 300
Query: 946 DFFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXXXXXX 1125
D KE+E RA EQALA DR++ +I FL +FT+ S + +L ++I
Sbjct: 301 DRINKELELRAHEQALANDRQATLIRFLKKFTSSDSSVE--ILGEKI---APDPVNVPNS 355
Query: 1126 XNVLAERTCSVSRAINPNASTSN------AIILAKAPQNQNPTS----------SQHNPK 1257
N + + + + NP + TSN A A A +Q TS P+
Sbjct: 356 SNASSSSSLVLEQNPNPASQTSNESQLKTATSSATALDHQKSTSILAKTNTSWTENQEPQ 415
Query: 1258 LPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXAPQNPN--------------------- 1374
P S + + P P APQNPN
Sbjct: 416 NPTSTLARNIPQVP---------TTSSTLAVPAAPQNPNFLNSHSSTSGPPNTLPSHNKV 466
Query: 1375 -STSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKE-STKAPLWERISQGMLELGYKRS 1548
+ S ++D GKRWPRDEV +LINLRC+L + +DKE S +APLWERISQGMLE GYKRS
Sbjct: 467 QAKSTYKDDIGKRWPRDEVLALINLRCSLYNNNEDKEGSARAPLWERISQGMLESGYKRS 526
Query: 1549 AKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSEGLENQAHS 1728
AK+CKEKWENINKYFRKTKD NKKRS+DS+TCPYFHQL+TLYNQG L P +N++ S
Sbjct: 527 AKRCKEKWENINKYFRKTKDVNKKRSIDSRTCPYFHQLSTLYNQGTLVAP----DNRSAS 582
Query: 1729 AEIRTVTPETGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1863
E R+ PET + Q+ G S+ +HV +G+KNMVQ P ++++
Sbjct: 583 PENRSSLPETRHSSSSQN-GTSNSTLHVGDGEKNMVQVPPLDFEF 626
>ref|XP_002272789.2| PREDICTED: trihelix transcription factor GTL2-like [Vitis vinifera]
Length = 615
Score = 365 bits (938), Expect = 2e-98
Identities = 255/649 (39%), Positives = 335/649 (51%), Gaps = 75/649 (11%)
Frame = +1
Query: 142 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXX------FSVH---------ELQPS----- 258
MF+GVP +QFHQF+A+ +A F +H +L PS
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASSTTSQLQPPPPSLSFPLHVSSSTFPSFDLYPSGSGGG 60
Query: 259 -------NQVFQSSHLLHPLHRQHST--HEDEEKEEDRAVAGSLDIEGMRSASEPMEPWL 411
+Q Q HLLHPLH S +D++KEE+ V+ +L+ + RS + + PW
Sbjct: 61 GGAAAAAHQPLQVPHLLHPLHHHSSAPHKDDQDKEENALVSINLEPQKERSMLDLINPWS 120
Query: 412 KEEVLALLTIRSSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXX 588
+EVLALL IRSS+ + DF W HVSRKLAE GFKRSAEKCKEKFE+ S+
Sbjct: 121 NDEVLALLRIRSSMENWYPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYS 180
Query: 589 XXXRSFNELEALFEDQSHKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEEN 750
R F+ELE L+ +S D K+++ EE D ++EE+S NET + NP E
Sbjct: 181 KNYRFFSELEELYHGESPHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLET 238
Query: 751 QYVVXXXXXXXXXIYHQ---LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXX 918
+ V + Q E+ KGF E V+K+M QQEE+H KLLEDM
Sbjct: 239 EKVEDKSKGKKRKRHTQNKSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAR 298
Query: 919 XXGWKKKEMDFFYKEMEFRAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK 1077
WKK+EMD KE+E R EQA+A DR++ II FL +FT+ +G L K
Sbjct: 299 EEAWKKQEMDRINKEIEIREHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSK 358
Query: 1078 -----------DEILXXXXXXXXXXXXXN-------------VLAERTCSVSRAINPNAS 1185
IL N V + CS++ NPNA
Sbjct: 359 VPSRSNPPTSPSSILPQNPNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP 418
Query: 1186 TSNAIILAKAPQNQNPTSSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXAPQ 1365
+ +A +QNPTS + PNS + P P
Sbjct: 419 ------IDEAQPSQNPTSMVLESQNPNSLNTQKRPSAPTSF------------------- 453
Query: 1366 NPNSTSNDREDYGKRWPRDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKR 1545
P+ T + ++ GKRWPRDEV +LINLRC+L +V+DKE K PLWERISQGML LGYKR
Sbjct: 454 -PSITDHRDQELGKRWPRDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKR 510
Query: 1546 SAKKCKEKWENINKYFRKTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPSE---GLEN 1716
SAK+CKEKWENINKYFRKTKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS EN
Sbjct: 511 SAKRCKEKWENINKYFRKTKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPSSEAPAPEN 570
Query: 1717 QAHSAEIRTVTPETGVGACPQDAGFSDPIVHVNEGDKNMVQASPQEYQY 1863
+S+E + PE VG + +EG++N Q ++++
Sbjct: 571 CLNSSENHSSLPENQVGGSSSNTNMH----AADEGEENAAQLPAYDFKF 615
>emb|CAN72556.1| hypothetical protein VITISV_028885 [Vitis vinifera]
Length = 569
Score = 347 bits (891), Expect = 5e-93
Identities = 237/575 (41%), Positives = 305/575 (53%), Gaps = 55/575 (9%)
Frame = +1
Query: 142 MFNGVP-EQFHQFIASRSAXXXXXXXXXXXXFSVHELQPSNQVFQSSHLLHPLHRQHSTH 318
MF+GVP +QFHQF+A+ +A + +LQP L PLH ST
Sbjct: 1 MFDGVPSDQFHQFVAAAAAAAASS--------TTSQLQPP-----PPSLSFPLHVSSSTF 47
Query: 319 ------------EDEEKEEDRAVAGSLDIEGMRSASEPMEPWLKEEVLALLTIRSSLGIE 462
+D++KEE+ V+ +L+ + RS + + PW +EVLALL IRSS+
Sbjct: 48 PSFDLYPSGGGGDDQDKEENALVSINLEPQKERSMLDLINPWSNDEVLALLRIRSSMENW 107
Query: 463 FSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSK-XXXXXXXXXXXRSFNELEALFEDQS 639
+ DF W HVSRKLAE GFKRSAEKCKEKFE+ S+ R F+ELE L+ +S
Sbjct: 108 YPDFTWEHVSRKLAEQGFKRSAEKCKEKFEQESRYFNTTMNYSKNYRFFSELEELYHGES 167
Query: 640 HKSVD-----DKMLKSNEEEKMDVNMEENSANET-LENPVEENQYVVXXXXXXXXXIYHQ 801
D K+++ EE D ++EE+S NET + NP E + V + Q
Sbjct: 168 PHQQDVAEKNQKVVEKPNEE--DRSLEEDSRNETVVGNPCLETEKVEDKSKGKKRKRHTQ 225
Query: 802 ---LELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWKKKEMDFFYKEME 969
E+ KGF E V+K+M QQEE+H KLLEDM WKK+EMD KE+E
Sbjct: 226 NKSFEMFKGFCEAVVSKMMAQQEEMHNKLLEDMVKRDEEKTAREEAWKKQEMDRINKEIE 285
Query: 970 FRAQEQALACDRESKIIEFLNQFTTGT-------SPTQGLLLK-----------DEILXX 1095
R EQA+A DR++ II FL +FT+ +G L K IL
Sbjct: 286 IREHEQAIAGDRQATIIGFLKKFTSSNPVETPCFGNNEGELSKVPSRSNPPTSTSSILPQ 345
Query: 1096 XXXXXXXXXXXN-------------VLAERTCSVSRAINPNASTSNAIILAKAPQNQNPT 1236
N V + CS++ NPNA + +A +QNPT
Sbjct: 346 NPNPTSHLSPQNKQLEAPTSSRKVIVPHQNPCSLTTPTNPNAP------IDEAQPSQNPT 399
Query: 1237 SSQHNPKLPNSRILEHPPHNPXXXXXXXXXXXXXXXXXXXAPQNPNSTSNDREDYGKRWP 1416
S + PNS + P P P+ T + ++ GKRWP
Sbjct: 400 SMVLESQNPNSLNTQKSPSAPSSF--------------------PSITDHRDQELGKRWP 439
Query: 1417 RDEVNSLINLRCNLQTSVDDKESTKAPLWERISQGMLELGYKRSAKKCKEKWENINKYFR 1596
RDEV +LINLRC+L +V+DKE K PLWERISQGML LGYKRSAK+CKEKWENINKYFR
Sbjct: 440 RDEVLALINLRCSL--NVEDKEGAKGPLWERISQGMLALGYKRSAKRCKEKWENINKYFR 497
Query: 1597 KTKDANKKRSLDSKTCPYFHQLNTLYNQGRLSMPS 1701
KTKD +KKRSLDS+TCPYFHQL+TLY+QG L +PS
Sbjct: 498 KTKDVSKKRSLDSRTCPYFHQLSTLYSQGTLVVPS 532
>ref|XP_003591003.1| Trihelix transcription factor [Medicago truncatula]
gi|355480051|gb|AES61254.1| Trihelix transcription factor
[Medicago truncatula]
Length = 557
Score = 329 bits (844), Expect = 2e-87
Identities = 213/561 (37%), Positives = 300/561 (53%), Gaps = 40/561 (7%)
Frame = +1
Query: 142 MFNGVPEQFHQFIASRSAXXXXXXXXXXXXFSVHELQP-----SNQVFQSSH-------- 282
M++GVP+QFHQFI R++ + + P + Q S H
Sbjct: 1 MYDGVPDQFHQFITPRTSSSSLPLHLPFPLSTPNNTFPPFDPYNQQNHPSQHHQLPLQVQ 60
Query: 283 --LLHPLHRQHSTHEDEEKEEDRAVAG----SLDIEGMRSASEPMEPWLKEEVLALLTIR 444
LLHPLH H+D+E +E + +D + + + ++PW +EVLALL IR
Sbjct: 61 PNLLHPLH----PHKDDEDKEQNSTPSMNNFQIDRDQRQILPQLIDPWTNDEVLALLKIR 116
Query: 445 SSLGIEFSDFIWGHVSRKLAELGFKRSAEKCKEKFEEVSKXXXXXXXXXXX-----RSFN 609
SS+ F DF W HVSRKLAE+G+KRSAEKCKEKFEE S+ R
Sbjct: 117 SSMESWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINHNQNSFGKNFRFVT 176
Query: 610 ELEALFED---QSHKSVDDKMLKSNEEEKMDVNMEENSANETLENPVEENQYVVXXXXXX 780
ELE +++ +++K++ + ++ ++KMD + E++ ++ L + E + V
Sbjct: 177 ELEEVYQGGGGENNKNLVEAEKQNEVQDKMDPHEEDSRMDDVLVSKKSEEEVVEKGTTND 236
Query: 781 XXXIYH----QLELLKGFSE-FVNKIMVQQEELHKKLLEDMXXXXXXXXXXXXGWKKKEM 945
+ E+ KGF E V K+M QQEE+H KL+EDM WKK+EM
Sbjct: 237 EKKRKRSGDDRFEVFKGFCESVVKKMMDQQEEMHNKLIEDMVKRDEEKFSREEAWKKQEM 296
Query: 946 DFFYKEMEFRAQEQALACDRESKIIEFLNQFTTGTSPTQGLLLKDEILXXXXXXXXXXXX 1125
+ KE+E A EQA+A DR++ II+FLN+F+T + + + ++
Sbjct: 297 EKMNKELELMAHEQAIAGDRQAHIIQFLNKFSTSANSSSLTSMSTQL---------QAYL 347
Query: 1126 XNVLAERTCSVSRAINPNASTSNAIILAKAPQNQNPTSSQHNPKLPNSR--ILEHPPHNP 1299
+ + + S + NPN T + P +NP+S+ LP+S ++ P +N
Sbjct: 348 ATLTSNSSSSTLHSQNPNPETLKKTL---QPIPENPSST-----LPSSSTTLVAQPRNN- 398
Query: 1300 XXXXXXXXXXXXXXXXXXXAPQNPNST-----SNDREDYGKRWPRDEVNSLINLRCNLQT 1464
NP S+ S +R+D G+RWP+DEV +LINLRCN
Sbjct: 399 ----------------------NPISSYSLISSGERDDIGRRWPKDEVLALINLRCNNNN 436
Query: 1465 SVDDKEST-KAPLWERISQGMLELGYKRSAKKCKEKWENINKYFRKTKDANKKRSLDSKT 1641
+ S KAPLWERISQGMLELGYKRSAK+CKEKWENINKYFRKTKDAN+KRSLDS+T
Sbjct: 437 EEKEGNSNNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRSLDSRT 496
Query: 1642 CPYFHQLNTLYNQGRLSMPSE 1704
CPYFH L LYNQG+L + S+
Sbjct: 497 CPYFHLLTNLYNQGKLVLQSD 517