BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001237
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis...    69   5e-10
ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycin...    68   7e-10
ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arab...    67   2e-09
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul...    67   2e-09
emb|CBI15119.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
           gi|9759450|dbj|BAB10366.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974556|gb|AAL31194.1|
           AT5g61030/maf19_30 [Arabidopsis thaliana]
           gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30
           [Arabidopsis thaliana] gi|225879144|dbj|BAH30642.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332010031|gb|AED97414.1| glycine-rich RNA-binding
           protein 3 [Arabidopsis thaliana]
          Length = 309

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -2

Query: 208 MAFVSKLGNILKQXXXXXXXXXXXXXXXXXSIFQAVRCMSS-KLFIGGLSYQTDEQSLRE 32
           MAF+SK GNILKQ                  +FQA+RCMSS KLFIGG++Y  DE SLRE
Sbjct: 1   MAFLSKFGNILKQTTNKQLNAQVSLSSPS--LFQAIRCMSSSKLFIGGMAYSMDEDSLRE 58

Query: 31  AFSSFGEVLD 2
           AF+ +GEV+D
Sbjct: 59  AFTKYGEVVD 68


>ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
           gi|255645259|gb|ACU23127.1| unknown [Glycine max]
          Length = 275

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
 Frame = -2

Query: 208 MAFVSKLGNILKQXXXXXXXXXXXXXXXXXSIFQAVRCMSS----KLFIGGLSYQTDEQS 41
           MAF  ++GN+L+Q                   FQA+RCMSS    KLFIGG+SY TDEQS
Sbjct: 1   MAFFGRIGNLLRQTASRQVSSKLRSPPS---FFQAIRCMSSAPSTKLFIGGVSYSTDEQS 57

Query: 40  LREAFSSFGEVLD 2
           LREAFS +GEV+D
Sbjct: 58  LREAFSKYGEVVD 70


>ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
           lyrata] gi|297310551|gb|EFH40975.1| hypothetical protein
           ARALYDRAFT_358310 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
 Frame = -2

Query: 208 MAFVSKLGNILKQXXXXXXXXXXXXXXXXXSIFQAVRCMSS-KLFIGGLSYQTDEQSLRE 32
           MAF+SK GNILKQ                  +FQA+RCMSS KLFIGG++Y  DE SLRE
Sbjct: 1   MAFLSKFGNILKQTTSKQLNAQVSLSSPS--LFQAIRCMSSSKLFIGGMAYSMDEDSLRE 58

Query: 31  AFSSFGEVLD 2
           AF+ +GEV++
Sbjct: 59  AFTKYGEVVE 68


>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
          Length = 144

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 47/69 (68%)
 Frame = -2

Query: 208 MAFVSKLGNILKQXXXXXXXXXXXXXXXXXSIFQAVRCMSSKLFIGGLSYQTDEQSLREA 29
           MAF +KLG +L+Q                  +F AVRCMS+KLF+GGLS+ TD+QSLR+A
Sbjct: 1   MAFYNKLGGLLRQSISGNAVSATSPMPS---MFDAVRCMSTKLFVGGLSWGTDDQSLRDA 57

Query: 28  FSSFGEVLD 2
           F++FG+V+D
Sbjct: 58  FATFGDVVD 66


>emb|CBI15119.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/70 (52%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -2

Query: 208 MAFVSKLGNILKQXXXXXXXXXXXXXXXXXSIFQAVRCMSS-KLFIGGLSYQTDEQSLRE 32
           MAF  K+GNIL+Q                  I+QA+RCMSS KLFIGGLSY TD+ SLRE
Sbjct: 1   MAFFGKVGNILRQTVSKQVNSQFSVSNPS--IYQAIRCMSSSKLFIGGLSYSTDDTSLRE 58

Query: 31  AFSSFGEVLD 2
           AF  +GEV++
Sbjct: 59  AFHKYGEVIE 68