BLASTX nr result

ID: Coptis23_contig00001232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001232
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...   421   e-115
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like is...   388   e-105
ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [G...   377   e-102
ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [C...   376   e-102

>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score =  421 bits (1083), Expect = e-115
 Identities = 205/255 (80%), Positives = 225/255 (88%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1203 IKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTAT 1024
            IK S TNKTC +KL V K MK PV+VYYQ+D+FYQNHRRYVKSRSDKQLRSK  E  T T
Sbjct: 102  IKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKT 161

Query: 1023 CEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYP 847
            C PEA    G PIVPCGLIAWSLFNDTYGFS+KNK L+VSKK+IAWKSD+E KFGS+VYP
Sbjct: 162  CAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYP 221

Query: 846  KNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALPTFRKLYGHIEVDLEANETITVVIQ 667
            KNFQS G+IGGAKLNAS PLS+Q+DLIVWMRTAALPTFRKLYG IE D EAN+ ITVVI+
Sbjct: 222  KNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIE 281

Query: 666  NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTVGGLCLFLAVSFIIVYVAKPRPLGD 487
            NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYL+VGGLCLFLA++FI++YV KPRPLGD
Sbjct: 282  NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGD 341

Query: 486  PSFLSWNRNPAGHFN 442
            PS+LSWNRN AG  N
Sbjct: 342  PSYLSWNRNAAGQAN 356


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  409 bits (1052), Expect = e-112
 Identities = 196/255 (76%), Positives = 221/255 (86%), Gaps = 1/255 (0%)
 Frame = -1

Query: 1203 IKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTAT 1024
            I+ S+ NKTC   + V KHMKSPVF+YY++D+FYQNHRRYVKSRSDKQLRSK  E +T T
Sbjct: 99   IQTSEINKTCTMTINVPKHMKSPVFIYYELDNFYQNHRRYVKSRSDKQLRSKASEGVTET 158

Query: 1023 CEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYP 847
            C+PEA T+NG PIVPCGL+AWSLFNDTY FSVK +VL+VSKKNIAWKSD+E KFGS+VYP
Sbjct: 159  CKPEAVTSNGQPIVPCGLVAWSLFNDTYRFSVKKEVLDVSKKNIAWKSDQEHKFGSDVYP 218

Query: 846  KNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALPTFRKLYGHIEVDLEANETITVVIQ 667
            KNFQS  +IGG KL++S PLSEQ DLIVWMRTAALP FRKLYG IE DL+AN TITV I+
Sbjct: 219  KNFQSGSLIGGGKLDSSIPLSEQVDLIVWMRTAALPNFRKLYGKIEKDLQANTTITVTIE 278

Query: 666  NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTVGGLCLFLAVSFIIVYVAKPRPLGD 487
            NNYNTYSFGGKKKLVLSTTSWIGGKN FLG AY+ +GGLCLFLAV F+ VYV KPRPLGD
Sbjct: 279  NNYNTYSFGGKKKLVLSTTSWIGGKNSFLGRAYIAIGGLCLFLAVCFVFVYVFKPRPLGD 338

Query: 486  PSFLSWNRNPAGHFN 442
            PS+LSWNRNP+G  N
Sbjct: 339  PSYLSWNRNPSGQMN 353


>ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis sativus]
            gi|449501692|ref|XP_004161439.1| PREDICTED:
            ALA-interacting subunit 5-like isoform 2 [Cucumis
            sativus]
          Length = 337

 Score =  388 bits (997), Expect = e-105
 Identities = 190/236 (80%), Positives = 209/236 (88%), Gaps = 1/236 (0%)
 Frame = -1

Query: 1203 IKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTAT 1024
            IK S TNKTC +KL V K MK PV+VYYQ+D+FYQNHRRYVKSRSDKQLRSK  E  T T
Sbjct: 102  IKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKT 161

Query: 1023 CEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYP 847
            C PEA    G PIVPCGLIAWSLFNDTYGFS+KNK L+VSKK+IAWKSD+E KFGS+VYP
Sbjct: 162  CAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYP 221

Query: 846  KNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAALPTFRKLYGHIEVDLEANETITVVIQ 667
            KNFQS G+IGGAKLNAS PLS+Q+DLIVWMRTAALPTFRKLYG IE D EAN+ ITVVI+
Sbjct: 222  KNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIE 281

Query: 666  NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTVGGLCLFLAVSFIIVYVAKPR 499
            NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYL+VGGLCLFLA++FI++YV KPR
Sbjct: 282  NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPR 337


>ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]
          Length = 344

 Score =  377 bits (968), Expect = e-102
 Identities = 179/250 (71%), Positives = 204/250 (81%)
 Frame = -1

Query: 1197 RSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCE 1018
            +S  +KTC   L V KHMKSP++VYYQ+D+FYQNHRRYVKSRSD+QLR +  E+ T+ C 
Sbjct: 95   QSPADKTCKISLPVDKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRDRREENSTSACN 154

Query: 1017 PEAKTNNGPIVPCGLIAWSLFNDTYGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYPKNF 838
            PE   N   IVPCGLIAWSLFNDTY FS  NK L V+K  I+WKSD+E KFG +V+PKNF
Sbjct: 155  PEDIANGKAIVPCGLIAWSLFNDTYSFSRDNKNLTVNKNGISWKSDREHKFGKDVFPKNF 214

Query: 837  QSSGVIGGAKLNASKPLSEQDDLIVWMRTAALPTFRKLYGHIEVDLEANETITVVIQNNY 658
            QSS + GGA LN S PLS+Q+DLIVWMRTAALPTFRKLYG IEVDL A + I V +QNNY
Sbjct: 215  QSSAIRGGASLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLNAGDQINVTLQNNY 274

Query: 657  NTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLTVGGLCLFLAVSFIIVYVAKPRPLGDPSF 478
            NTYSF GKKKLVLSTTSW+GGKNDFLGIAYLTVGGLC FLA++F +VY  KPR LGDPS+
Sbjct: 275  NTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTVVYFVKPRQLGDPSY 334

Query: 477  LSWNRNPAGH 448
            LSWNRNP GH
Sbjct: 335  LSWNRNPGGH 344


>ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]
            gi|449475853|ref|XP_004154570.1| PREDICTED:
            ALA-interacting subunit 3-like [Cucumis sativus]
          Length = 343

 Score =  376 bits (966), Expect = e-102
 Identities = 172/246 (69%), Positives = 204/246 (82%)
 Frame = -1

Query: 1185 NKTCIKKLLVHKHMKSPVFVYYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAK 1006
            NK C + + V K MK P++VYYQ+D+FYQNHRRYV+SRSDKQLR  G E  T++C+PE  
Sbjct: 98   NKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDPGSERDTSSCKPEDN 157

Query: 1005 TNNGPIVPCGLIAWSLFNDTYGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYPKNFQSSG 826
             N  P+VPCGLIAWSLFNDTY F++  K + ++K  I+WKSD+E KFG NV+PKNFQ   
Sbjct: 158  WNGQPVVPCGLIAWSLFNDTYNFTLNKKQVAINKVGISWKSDREHKFGKNVFPKNFQKGN 217

Query: 825  VIGGAKLNASKPLSEQDDLIVWMRTAALPTFRKLYGHIEVDLEANETITVVIQNNYNTYS 646
            + GG KLN S PLS+Q+DLIVWMRTAALPTFRKLYG IEVDLE N+ I VV++NNYNTYS
Sbjct: 218  ITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYS 277

Query: 645  FGGKKKLVLSTTSWIGGKNDFLGIAYLTVGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWN 466
            F GKKKLVLSTTSW+GGKNDFLGIAYLTVGGLC FLA++F +VY+ KPR LGDPS+LSWN
Sbjct: 278  FNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWN 337

Query: 465  RNPAGH 448
            RNP+GH
Sbjct: 338  RNPSGH 343


Top