BLASTX nr result

ID: Coptis23_contig00001228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001228
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 ...    95   4e-17
ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trich...    94   1e-16
ref|XP_003549394.1| PREDICTED: NAC domain-containing protein 69-...    78   5e-12
ref|XP_003545318.1| PREDICTED: NAC domain-containing protein 55-...    76   2e-11
ref|XP_002510187.1| transcription factor, putative [Ricinus comm...    75   5e-11

>ref|XP_002282899.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera]
          Length = 302

 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 91/308 (29%), Positives = 131/308 (42%), Gaps = 23/308 (7%)
 Frame = -2

Query: 1353 MGEEEDPKNKP--LPPGFRFNPTEQQLFSFYLXXXXXXXXXXXXXXXXXT-DVIPEIDSI 1183
            MG++ + +  P  LPPG RF+P+E+QL  +YL                   + I E+D +
Sbjct: 1    MGDQNNSQTTPFQLPPGCRFHPSEEQLIRYYLTGKNTTGALSSSDHNVFGFNAIGELD-L 59

Query: 1182 YNYDPCDLPEIDSFPXXXXXXXXXXXYFTLDXXXXXXXXXXXXXXXXKC-RIRNVFFSXX 1006
            Y Y+P +LP+   F             +T                  +  R+R+V     
Sbjct: 60   YGYEPFNLPDTACFGFGHGGRRRHWYCYTARVLKEKGRRKAGGGFWKRTGRVRDVVVGKD 119

Query: 1005 XXXXXXXTKTSFVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKV 826
                    +T+F FY  +S K     RTDW+M EYALVDH    FVLCRV++KS S N  
Sbjct: 120  KVTLGR--RTTFAFYLGNSSKS--AVRTDWVMFEYALVDHLKASFVLCRVFVKSPSGNNA 175

Query: 825  MKVGLNSHTEESFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRS 655
                ++S  EES +A  +     DG + S I E  V  DN V  +         L     
Sbjct: 176  SDHVISSCGEESVSAVRHVGIQHDGTATSDIVEANVHGDNSVDTKNEIPKISARLLSELD 235

Query: 654  DQLIGNSNRLIVSGYTF-------DDVDMDELKTNTI---------FLEGDYLELDDLVA 523
            DQ++  ++R  V+ + F       + V      T  +          LE D++ELDDLV 
Sbjct: 236  DQVM--THRGFVADFNFPLGIQAHNPVMSTSGSTRFVDGTTQGLMSILEEDFIELDDLVY 293

Query: 522  PLLAFGSS 499
            PLL    S
Sbjct: 294  PLLGIDQS 301


>ref|XP_002327163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222835478|gb|EEE73913.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 288

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 87/283 (30%), Positives = 124/283 (43%), Gaps = 18/283 (6%)
 Frame = -2

Query: 1320 LPPGFRFNPTEQQLFSFYLXXXXXXXXXXXXXXXXXTDVIPEIDSIYNYDPCDLPEIDSF 1141
            LPPG RF P+++QLF +YL                  D+I E+D +Y+Y+P DLPE   +
Sbjct: 15   LPPGCRFYPSDEQLFCYYLKNKNRTVPNDTDDVNGY-DLIKELD-LYDYEPFDLPENACY 72

Query: 1140 PXXXXXXXXXXXYFTLDXXXXXXXXXXXXXXXXKCRIRNVFFSXXXXXXXXXTKTSFVFY 961
                         +T +                  R+R+V             +T FVFY
Sbjct: 73   AYGYKARKRHWYCYTKEQVGVPRRKAKGGFWRISGRVRDVVVGLGGEAVMGT-RTRFVFY 131

Query: 960  KRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHTEESFAA 781
              +S K     RT W++ EYALVDH    FVLCRV++KS   N + +  ++S  EES +A
Sbjct: 132  MGNSVKS--AVRTGWVLYEYALVDHAKASFVLCRVFVKSRGGNSISENVVSSCAEESVSA 189

Query: 780  KNN---------NVDGASASGIGEV------VVRQ-DNQVAVRPFSDNGVGSLGVVRSDQ 649
              +           D A A G  ++      + R+ D+QV  RP S   + S       Q
Sbjct: 190  LPSIGAQHDEFLTPDIAEAKGPNDLSRYSARLDRELDDQVTTRPLS---ISSFQFPSDSQ 246

Query: 648  LIGNSNRLIVSGYTFDD--VDMDELKTNTIFLEGDYLELDDLV 526
               N      SG T  +  VD +  +     LEGD++ELDDLV
Sbjct: 247  C--NEAVRRTSGPTGGNMYVDAETSQQLQSILEGDFIELDDLV 287


>ref|XP_003549394.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]
          Length = 302

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 11/228 (4%)
 Frame = -2

Query: 1341 EDPKNKPLPPGFRFNPTEQQLFSFYLXXXXXXXXXXXXXXXXXTDVIPEIDSIYNYDPCD 1162
            ED  +  LPPG+RF P+E+ L  +YL                  D+I E+D +Y++DP +
Sbjct: 2    EDHAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGS----DLIRELD-LYDHDPFE 56

Query: 1161 LPEIDS-FPXXXXXXXXXXXYFTLDXXXXXXXXXXXXXXXXKCRIRNVFFSXXXXXXXXX 985
            LP+  + F             +  +                K ++R++            
Sbjct: 57   LPDAAACFSYGYKGRKKHWFCYAKETKRRNRRKVKSGFWLRKGKVRDIS-DHNGDDVVLG 115

Query: 984  TKTSFVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNS 805
            T+T FVFY  +S K     RTDW++ EYALVD  +  FVLCRV  K    N   ++GL+ 
Sbjct: 116  TRTRFVFYVGNSLKNAA--RTDWILYEYALVDRFLASFVLCRVVNKPPHKNSPSEIGLSC 173

Query: 804  HTEESFAAKNNNV----DGASASGIGEV------VVRQDNQVAVRPFS 691
              EES  A   +V    DG + S + E        V ++N++A  P S
Sbjct: 174  CAEESVVAVVRHVGVQCDGCAESDVVEAKVCDEGFVNRENEIAENPIS 221


>ref|XP_003545318.1| PREDICTED: NAC domain-containing protein 55-like [Glycine max]
          Length = 278

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 66/231 (28%), Positives = 97/231 (41%), Gaps = 11/231 (4%)
 Frame = -2

Query: 1341 EDPKNKPLPPGFRFNPTEQQLFSFYLXXXXXXXXXXXXXXXXXTDVIPEIDSIYNYDPCD 1162
            ED  +  LPPG+RF P+E+ L  +YL                  D+I E+D +Y++DP +
Sbjct: 2    EDRAHAALPPGYRFYPSEEVLVGYYLTKKNENREEGFYGS----DLIRELD-LYDHDPFE 56

Query: 1161 LPEIDSFPXXXXXXXXXXXYFTLDXXXXXXXXXXXXXXXXKC-RIRNVFFSXXXXXXXXX 985
            LP+   F             +  +                +  R+R++            
Sbjct: 57   LPDAACFSYGYKGRKKHWFCYAKETKRRNRKRKVKSGFWLRKGRVRDI--CDNRDDVVLA 114

Query: 984  TKTSFVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNS 805
            T T FVFY  +S K     RTDW++ EYALVD  +  FVLCRV  K    N   ++GL+ 
Sbjct: 115  TMTRFVFYVGNSLKNAA--RTDWILYEYALVDRVLASFVLCRVVSKPPHQNSPSEIGLSC 172

Query: 804  HTEESFAAKNNNV----DGASASGIGEV------VVRQDNQVAVRPFSDNG 682
              EES       V    DG + S + E        V ++N++A  P    G
Sbjct: 173  CAEESVGVAVRQVGVQCDGCAESDVVEAKVCDDGFVNRENEIAENPIRCGG 223


>ref|XP_002510187.1| transcription factor, putative [Ricinus communis]
            gi|223550888|gb|EEF52374.1| transcription factor,
            putative [Ricinus communis]
          Length = 276

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 14/277 (5%)
 Frame = -2

Query: 1314 PGFRFNPTEQQLFSFYLXXXXXXXXXXXXXXXXXT-DVIPEIDSIYNYDPCDLPEIDSFP 1138
            PG RF P+++QL  +YL                   D+I E+D +Y Y+P +LPE   + 
Sbjct: 6    PGCRFYPSDEQLLCYYLTSKTDEVGDGNNDKKINGYDLIKELD-LYEYEPSNLPENACYS 64

Query: 1137 XXXXXXXXXXXYFTL-------DXXXXXXXXXXXXXXXXKCRIRNVFFSXXXXXXXXXTK 979
                        +T        +                  R+R+V            T+
Sbjct: 65   YGYKGRRRHWYCYTKKFRVWKGEGRRRRRRKAKGGYWRSSGRVRDVV--DPGGKVVIGTR 122

Query: 978  TSFVFYKRDSEKERRCFRTDWMMIEYALVDHQMDFFVLCRVYLKSCSDNKVMKVGLNSHT 799
            + FVFY  +S +     RTDW++ EYAL+ H    +VLCRV++KS + N   +  L+   
Sbjct: 123  SKFVFYSGNSVQS--LIRTDWVLYEYALMHHVKASYVLCRVFVKSRAGNSNSENVLSCCA 180

Query: 798  EESFAAKNN---NVDGASASGIGEVVVRQDNQVAVRPFSDNGVGSLGVVRSDQLIGNSNR 628
            E++ +A  +     DG     I E  V + N V     +D     LG+        +SN+
Sbjct: 181  EQNVSAVRHIGIQHDGFLTPDIVEAKVHRGNSVDAE--NDLSKYPLGLSTKLDAFPDSNK 238

Query: 627  LI-VSGYTFDDVDMDELKTNTI--FLEGDYLELDDLV 526
            L+       DD+ +D   T  +   LEGD++ELDDL+
Sbjct: 239  LVRTPELPGDDMLVDAGTTQELVSILEGDFIELDDLL 275


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