BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001223
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90775.1| nucleotide-binding site leucine-rich repeat prote...   187   3e-45
gb|ACP30567.1| disease resistance protein [Brassica rapa subsp. ...   185   2e-44
gb|ACP30559.1| disease resistance protein [Brassica rapa subsp. ...   185   2e-44
gb|AFC90267.1| nucleotide-binding site leucine-rich repeat prote...   184   3e-44
gb|AFC90793.1| nucleotide-binding site leucine-rich repeat prote...   184   3e-44

>gb|AFC90775.1| nucleotide-binding site leucine-rich repeat protein, partial
            [Rhododendron formosanum]
          Length = 267

 Score =  187 bits (476), Expect = 3e-45
 Identities = 103/266 (38%), Positives = 159/266 (59%), Gaps = 2/266 (0%)
 Frame = +3

Query: 321  TATMMNIHNRLVA-TKIFDKIIWVNLSKHWSLEKVQNDIAVQLNVDLPKERFNVIRDVML 497
            T TM  IHN+L+  T  FD + WV +SK +++ ++Q +IA +LNV +  +     R   L
Sbjct: 2    TTTMKYIHNKLLKETAKFDSVFWVTVSKAFNVRELQREIAKELNVSISDDEDVTRRAAEL 61

Query: 498  FSSLKDAKKFLIIFDDVWEPISLKMVGIPLPNKRNGCKIVVTTRSSNVCWRMKTNKTIEI 677
             + L   +++++I DD+WE   L+ VGIP P K NGCK+V+TTRS  VC RM    ++++
Sbjct: 62   CTVLSRRERYVLILDDLWEAFPLETVGIPEPTKPNGCKLVLTTRSFEVCRRMGCT-SVQV 120

Query: 678  DVLSQNEAWDLFVSKC-DSRVFFRAGIESIARQMVRECDHSPVLLASLGKALRFENDIKV 854
            ++L++ EA  LF+ K   +       ++ IA Q+ +EC   P+ +A +G +LR    I+ 
Sbjct: 121  ELLTEEEALMLFLRKAVGNDTMLPPKLDEIATQVSKECARLPLAIAMVGGSLRGLKGIRE 180

Query: 855  WEKALEDLTSSLAQIQGMEEKNIRVLRLIYSRLKNESTRNCFLYSAFFPEDYLFESEELI 1034
            W  AL++LTSS  ++   E K    L+  YSRL +E  +NCFLY A + ED+    +ELI
Sbjct: 181  WRNALQELTSSTKEVNDGERKVFEQLKFSYSRLGDEVLQNCFLYCALYREDHDIPVDELI 240

Query: 1035 RYWMAEEFIKEDGDMVMQIDLGFEIL 1112
             YW+AEEFI +   +  Q+D G  IL
Sbjct: 241  EYWIAEEFIGDMDSVEAQMDKGHAIL 266


>gb|ACP30567.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 784

 Score =  185 bits (469), Expect = 2e-44
 Identities = 101/271 (37%), Positives = 157/271 (57%), Gaps = 7/271 (2%)
 Frame = +3

Query: 321  TATMMNIHNRL-VATKIFDKIIWVNLSKHWSLEKVQNDIAVQLNV-----DLPKERFNVI 482
            T  +  I+N+   A   F  +IWV +S    +EK+Q+DIA +L +     D+ KE  + +
Sbjct: 99   TTLLTQINNKFREAVDGFQIVIWVVVSSDLRVEKIQDDIAKKLGLRGEEWDM-KEEIDKV 157

Query: 483  RDVMLFSSLKDAKKFLIIFDDVWEPISLKMVGIPLPNKRNGCKIVVTTRSSNVCWRMKTN 662
             D+   + LK+ KKF+++ DD+W  I L  +G+P P K NGCK+V TTRS  VC RM  +
Sbjct: 158  TDI--HAKLKN-KKFVLLLDDIWTKIDLTEIGVPFPTKENGCKVVFTTRSKEVCGRMGVD 214

Query: 663  KTIEIDVLSQNEAWDLFVSKCDSRVFFR-AGIESIARQMVRECDHSPVLLASLGKALRFE 839
              +E+  L+ NEAWDLF  K           I   AR++ R+C   P+ L  +G+ +  +
Sbjct: 215  DPMEVQCLTDNEAWDLFKRKVGPLTLKSYPSIPEQARKVTRKCCGLPLALNVIGETMSCK 274

Query: 840  NDIKVWEKALEDLTSSLAQIQGMEEKNIRVLRLIYSRLKNESTRNCFLYSAFFPEDYLFE 1019
              I+ W+ A++ L S  A   GME++ + +L+  Y  LK+E  ++CF Y + FPEDYL E
Sbjct: 275  RTIQEWDLAVQVLNSYAADFSGMEDRILPILKYSYDNLKSEHIKSCFQYCSLFPEDYLIE 334

Query: 1020 SEELIRYWMAEEFIKEDGDMVMQIDLGFEIL 1112
             E+LI YW+ E FI E  D   +++ G++I+
Sbjct: 335  KEKLIDYWICEGFISEKEDRERRVNQGYDII 365


>gb|ACP30559.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 786

 Score =  185 bits (469), Expect = 2e-44
 Identities = 101/271 (37%), Positives = 157/271 (57%), Gaps = 7/271 (2%)
 Frame = +3

Query: 321  TATMMNIHNRL-VATKIFDKIIWVNLSKHWSLEKVQNDIAVQLNV-----DLPKERFNVI 482
            T  +  I+N+   A   F  +IWV +S    +EK+Q+DIA +L +     D+ KE  + +
Sbjct: 99   TTLLTQINNKFREAVDGFQIVIWVVVSSDLRVEKIQDDIAKKLGLRGEEWDM-KEEIDKV 157

Query: 483  RDVMLFSSLKDAKKFLIIFDDVWEPISLKMVGIPLPNKRNGCKIVVTTRSSNVCWRMKTN 662
             D+   + LK+ KKF+++ DD+W  I L  +G+P P K NGCK+V TTRS  VC RM  +
Sbjct: 158  TDI--HAKLKN-KKFVLLLDDIWTKIDLTEIGVPFPTKENGCKVVFTTRSKEVCGRMGVD 214

Query: 663  KTIEIDVLSQNEAWDLFVSKCDSRVFFR-AGIESIARQMVRECDHSPVLLASLGKALRFE 839
              +E+  L+ NEAWDLF  K           I   AR++ R+C   P+ L  +G+ +  +
Sbjct: 215  DPMEVQCLTDNEAWDLFKRKVGPLTLKSYPSIPEQARKVTRKCCGLPLALNVIGETMSCK 274

Query: 840  NDIKVWEKALEDLTSSLAQIQGMEEKNIRVLRLIYSRLKNESTRNCFLYSAFFPEDYLFE 1019
              I+ W+ A++ L S  A   GME++ + +L+  Y  LK+E  ++CF Y + FPEDYL E
Sbjct: 275  RTIQEWDLAVQVLNSYAADFSGMEDRILPILKYSYDNLKSEHIKSCFQYCSLFPEDYLIE 334

Query: 1020 SEELIRYWMAEEFIKEDGDMVMQIDLGFEIL 1112
             E+LI YW+ E FI E  D   +++ G++I+
Sbjct: 335  KEKLIDYWICEGFISEKEDRERRVNQGYDII 365


>gb|AFC90267.1| nucleotide-binding site leucine-rich repeat protein, partial
            [Rhododendron kanehirai]
          Length = 299

 Score =  184 bits (468), Expect = 3e-44
 Identities = 100/266 (37%), Positives = 155/266 (58%), Gaps = 2/266 (0%)
 Frame = +3

Query: 321  TATMMNIHNRLVATKI-FDKIIWVNLSKHWSLEKVQNDIAVQLNVDLPKERFNVIRDVML 497
            T  M  IHNRL+  K  FD + WV +SK +++ K+Q+DIA +LN  L  ++    R   L
Sbjct: 6    TTIMKQIHNRLLKEKDKFDGVFWVTISKEFNVLKLQSDIAKELNFSLSDDQDKRRRASQL 65

Query: 498  FSSLKDAKKFLIIFDDVWEPISLKMVGIPLPNKRNGCKIVVTTRSSNVCWRMKTNKTIEI 677
            + +L   K++++I DD+W+  SL+ VGIP P + NGCK+V+TTRS  VC RM+  K +++
Sbjct: 66   YEALSQQKRYVLIIDDLWKSFSLEKVGIPEPIRSNGCKLVLTTRSLEVCRRMEC-KPVQV 124

Query: 678  DVLSQNEAWDLFVSKCDSR-VFFRAGIESIARQMVRECDHSPVLLASLGKALRFENDIKV 854
            D+L++ EA  LF++K     +     +E IA ++  EC   P+ + +L  + R    I+ 
Sbjct: 125  DLLTEEEALTLFLTKAIGHDMVLAPDVEEIAAKIAEECARLPLAIVTLAGSCRVLKGIRE 184

Query: 855  WEKALEDLTSSLAQIQGMEEKNIRVLRLIYSRLKNESTRNCFLYSAFFPEDYLFESEELI 1034
            W  AL +L +S         K    L+  YSRL N+  ++CFLY + +PED+     ELI
Sbjct: 185  WRNALNELINSTKDASDDVSKVFERLKFSYSRLGNKVLQDCFLYCSLYPEDHEIPVGELI 244

Query: 1035 RYWMAEEFIKEDGDMVMQIDLGFEIL 1112
             YW+AEE I +   +  Q+D G +IL
Sbjct: 245  EYWIAEELITDMDSVEAQMDKGHDIL 270


>gb|AFC90793.1| nucleotide-binding site leucine-rich repeat protein, partial
            [Rhododendron formosanum]
          Length = 267

 Score =  184 bits (467), Expect = 3e-44
 Identities = 101/266 (37%), Positives = 156/266 (58%), Gaps = 2/266 (0%)
 Frame = +3

Query: 321  TATMMNIHNRLVATK-IFDKIIWVNLSKHWSLEKVQNDIAVQLNVDLPKERFNVIRDVML 497
            T  M +IHNRL+  K  FD + WV +SK + + K+Q+DIA  LN++   ++    R   L
Sbjct: 2    TTIMKHIHNRLLEEKGKFDIVYWVTISKEFDITKLQSDIAKALNLNRWDDQEVTRRASQL 61

Query: 498  FSSLKDAKKFLIIFDDVWEPISLKMVGIPLPNKRNGCKIVVTTRSSNVCWRMKTNKTIEI 677
            +++L   K++++I DDVWEP +L+ VGIP P + NGCK+V+TTR   VC RM+    +++
Sbjct: 62   YAALSRQKRYVLILDDVWEPFALEKVGIPEPTRSNGCKLVLTTRLLEVCTRMECT-PVKV 120

Query: 678  DVLSQNEAWDLFVSKCDSR-VFFRAGIESIARQMVRECDHSPVLLASLGKALRFENDIKV 854
            D+L++ EA  LF++K           ++ IA ++ +EC   P+ + ++ ++LR    I  
Sbjct: 121  DLLTEEEALTLFLTKAVGHDTVLDPEVKEIAAKIAKECACLPLAIVTIAESLRGLKGISE 180

Query: 855  WEKALEDLTSSLAQIQGMEEKNIRVLRLIYSRLKNESTRNCFLYSAFFPEDYLFESEELI 1034
            W  AL +L SS         K    L+  YSRL NE  ++CFLY + +PED+     ELI
Sbjct: 181  WRNALNELISSTKAASDDVSKVFERLKSSYSRLGNEELQDCFLYCSLYPEDHKIPVNELI 240

Query: 1035 RYWMAEEFIKEDGDMVMQIDLGFEIL 1112
             YW+AEE I +  D+  QI+ G  IL
Sbjct: 241  EYWIAEELITDMDDVEAQINKGHAIL 266