BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001221
         (1502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteo...   486   e-135
ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteo...   475   e-131
ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteo...   472   e-130
gb|ACU20022.1| unknown [Glycine max]                                  472   e-130
ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129

>ref|XP_002264383.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic [Vitis vinifera]
            gi|296083061|emb|CBI22465.3| unnamed protein product
            [Vitis vinifera]
          Length = 388

 Score =  486 bits (1250), Expect = e-135
 Identities = 247/353 (69%), Positives = 275/353 (77%)
 Frame = +2

Query: 113  KLFSTPTSSKSVRVVRRFFNSPSASTSLNNIPKQFQQENLKDGLMENYKNAPQYLYGLSA 292
            KLFS P   +S   VRR F SPSA  S ++IPKQF++ NL+DGLMENYKN PQY YGLS 
Sbjct: 39   KLFSAPKLGRSA--VRRGFRSPSAKASFDHIPKQFREGNLQDGLMENYKNVPQYFYGLSP 96

Query: 293  SQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSMYXX 472
            SQMDMFMTED+P+ RQSE+VTEE+ISSARNY+D+GGMWS SG+ D   S+YSMSVSMY  
Sbjct: 97   SQMDMFMTEDNPISRQSERVTEESISSARNYMDNGGMWSLSGVNDRGPSKYSMSVSMYRG 156

Query: 473  XXXXXXXXXXXXXXXXXXXXXXRICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYIN 652
                                  RICYLGMPIVPAV ELLVAQFMWLD+DNPSKPIYLYIN
Sbjct: 157  GRGSGRPRTAPPDLPSLLLDA-RICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYIN 215

Query: 653  SPGTQNEQMETVGSETEAYAIADTMAYCKSKIYTVNCGMAYGQSAMLLSLGAKGYRALQP 832
            S GTQNE+METVGSETEAYAIAD+MAYCKS +YTVNCG AYGQ+AMLLS+GAKGYR LQP
Sbjct: 216  STGTQNEKMETVGSETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQP 275

Query: 833  NCSTKLYLPKVNRSSGAAIDMWIKAKELDTNTDYYIELLAKGIGKSKEEITNDIRRPKYF 1012
            N STKLYLPKVNRSSGA IDMWIKAKELD N++YYIELLAKG GK+KEEI  D+ RPKY 
Sbjct: 276  NASTKLYLPKVNRSSGATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIKKDVERPKYL 335

Query: 1013 RAEEAIAYGIADKIIDSRDMAYEKRNYDEMLTQSKXXXXXXXXXXXXXXSGFR 1171
            +A+EAI YG+ADKII S D AYEKRNYDEML Q+K              SGFR
Sbjct: 336  QAQEAIDYGLADKIISSMDPAYEKRNYDEMLAQAKSMRRAAGAGPQAAPSGFR 388


>ref|XP_003536581.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  475 bits (1222), Expect = e-131
 Identities = 246/358 (68%), Positives = 279/358 (77%), Gaps = 2/358 (0%)
 Frame = +2

Query: 104  DTIKLFSTPTSSKSVRVVRRFFNSPSASTSLNNIPKQFQQENLKDGLMENYKNAPQYLYG 283
            D+  L  T     S RV  R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSSSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 284  LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 463
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKSDASKYSMSVSM 135

Query: 464  YXXXXXXXXXXXXXXXXXXXXXXXXRICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 643
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNPSKPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYL 194

Query: 644  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSKIYTVNCGMAYGQSAMLLSLGAKGYRA 823
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+ +YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 824  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDTNTDYYIELLAKGIGKSKEEITNDIRRP 1003
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ NT+YYIELLAKG GKSKEEI  D++RP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 1004 KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLTQSKXXXXXXXXXXXXXXSGFR 1171
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEML QS+              SGFR
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSRAMRRQGGGNPQAAPSGFR 372


>ref|XP_003555989.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 1, chloroplastic-like [Glycine max]
          Length = 372

 Score =  472 bits (1215), Expect = e-130
 Identities = 245/358 (68%), Positives = 279/358 (77%), Gaps = 2/358 (0%)
 Frame = +2

Query: 104  DTIKLFSTPTSSKSVRVVRRFFNSPSASTSLNNIPKQFQQENLKDGLMENYKNAPQYLYG 283
            D+  L  T     S RV  R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSFSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 284  LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 463
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYMDNGGMWSLSGMGKNDASKYSMSVSM 135

Query: 464  YXXXXXXXXXXXXXXXXXXXXXXXXRICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 643
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNP+KPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPTKPIYL 194

Query: 644  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSKIYTVNCGMAYGQSAMLLSLGAKGYRA 823
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+ +YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 824  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDTNTDYYIELLAKGIGKSKEEITNDIRRP 1003
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ NT+YYIELLAKG GKSKEEI  D++RP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 1004 KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLTQSKXXXXXXXXXXXXXXSGFR 1171
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEML QS+              SGFR
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSRAKRRQGGGNPQAAPSGFR 372


>gb|ACU20022.1| unknown [Glycine max]
          Length = 364

 Score =  472 bits (1215), Expect = e-130
 Identities = 242/340 (71%), Positives = 275/340 (80%), Gaps = 2/340 (0%)
 Frame = +2

Query: 104  DTIKLFSTPTSSKSVRVVRRFFNSPSASTSLNNIPKQFQQENLKDGLMENYKNAPQYLYG 283
            D+  L  T     S RV  R FNS SA  SL++IPKQF++ENLKDGLMENYKNAPQ LYG
Sbjct: 16   DSSFLHGTKLFPFSRRVAPRRFNSSSAKCSLDHIPKQFRKENLKDGLMENYKNAPQSLYG 75

Query: 284  LSASQMDMFMTEDSPVRRQSEKVTEENISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSM 463
            LS SQMDMFMTED+P+R+QSE+VTEE+ISSA+NY+D+GGMWS SGM   D S+YSMSVSM
Sbjct: 76   LSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYIDNGGMWSLSGMGKSDASKYSMSVSM 135

Query: 464  YXXXXXXXXXXXXXXXXXXXXXXXXRICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYL 643
            Y                        RICYLGMPIVPAVTEL+VAQFMWLDYDNPSKPIYL
Sbjct: 136  YRGGRGTGRPKTAPPDLPSLLLDA-RICYLGMPIVPAVTELIVAQFMWLDYDNPSKPIYL 194

Query: 644  YINSPGTQNEQMETVGSETEAYAIADTMAYCKSKIYTVNCGMAYGQSAMLLSLGAKGYRA 823
            YINS GT NE+ ETVGSETEAY+IAD M+Y K+ +YTVNCGMA+GQ+AMLLSLG KGYRA
Sbjct: 195  YINSSGTLNEKNETVGSETEAYSIADMMSYVKADVYTVNCGMAFGQAAMLLSLGTKGYRA 254

Query: 824  LQPNCSTKLYLPKVNRSSGAAIDMWIKAKELDTNTDYYIELLAKGIGKSKEEITNDIRRP 1003
            +QPN STKLYLPKVNRSSGA IDMWIKAKEL+ NT+YYIELLAKG GKSKEEI  D++RP
Sbjct: 255  VQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTEYYIELLAKGTGKSKEEIAKDVQRP 314

Query: 1004 KYFRAEEAIAYGIADKIID--SRDMAYEKRNYDEMLTQSK 1117
            KY +A++AI YGIADKIID  SRD+A+EKRNYDEML QS+
Sbjct: 315  KYLQAQDAIDYGIADKIIDSSSRDVAFEKRNYDEMLAQSR 354


>ref|XP_002313173.1| predicted protein [Populus trichocarpa] gi|222849581|gb|EEE87128.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  466 bits (1200), Expect = e-129
 Identities = 243/372 (65%), Positives = 283/372 (76%), Gaps = 6/372 (1%)
 Frame = +2

Query: 20   MATSLISSVTTPPXXXXXXXXXXXXXXX----DTIKLFSTPTSSKSVRVVRR-FFNSPSA 184
            MATSL+S +  P                     ++ L S P + + ++  R  ++ SPSA
Sbjct: 3    MATSLLSPLAAPNPELVYPATGLQQKSSFLPSASLFLLSNPRNQRVLQQQRCCYYKSPSA 62

Query: 185  STS-LNNIPKQFQQENLKDGLMENYKNAPQYLYGLSASQMDMFMTEDSPVRRQSEKVTEE 361
            S + LN+IP QF++ENLKDGLMENYKN PQ LYGL+ SQMDMFMTED+P+RRQS  VTE+
Sbjct: 63   SGNPLNHIPTQFREENLKDGLMENYKNVPQSLYGLTPSQMDMFMTEDNPIRRQSGSVTEQ 122

Query: 362  NISSARNYLDHGGMWSSSGMKDVDQSRYSMSVSMYXXXXXXXXXXXXXXXXXXXXXXXXR 541
            +ISS +NYLDHGGM+S SGM D   S+YSMSVSMY                        R
Sbjct: 123  SISSRKNYLDHGGMYSVSGMMDQGPSKYSMSVSMYRGGGRGYGRPESAPPDLPSLLLDAR 182

Query: 542  ICYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEQMETVGSETEAYAIAD 721
            ICYLGMPIVPAVTELLVAQFM+LDY++PSKPIYLYINS GTQNE+METVGSETEAYAIAD
Sbjct: 183  ICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKMETVGSETEAYAIAD 242

Query: 722  TMAYCKSKIYTVNCGMAYGQSAMLLSLGAKGYRALQPNCSTKLYLPKVNRSSGAAIDMWI 901
             M+YCKS IYTVNCGMAYGQ+AMLLSLGAKGYRALQPN STKLYLPKVNRSSGAA+DMWI
Sbjct: 243  IMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPKVNRSSGAAVDMWI 302

Query: 902  KAKELDTNTDYYIELLAKGIGKSKEEITNDIRRPKYFRAEEAIAYGIADKIIDSRDMAYE 1081
            KAKELD NT+YYIELLAKG GK KEE+  DI+RPKY +A+EAI YGIADK++ S D A+E
Sbjct: 303  KAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDYGIADKLLSSNDDAFE 362

Query: 1082 KRNYDEMLTQSK 1117
            KR+YD +L Q+K
Sbjct: 363  KRDYDALLAQTK 374