BLASTX nr result

ID: Coptis23_contig00001215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001215
         (2140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosph...   524   e-146
ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putat...   517   e-144
ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|2...   516   e-143
ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosph...   504   e-140

>ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis
            vinifera] gi|297736865|emb|CBI26066.3| unnamed protein
            product [Vitis vinifera]
          Length = 330

 Score =  524 bits (1350), Expect = e-146
 Identities = 262/331 (79%), Positives = 281/331 (84%)
 Frame = +3

Query: 894  MEEPGQLKRAFMDXXXXXXXXXXSRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSK 1073
            MEEPGQLKRAF+D          SRTVTSPLDVIKIRFQVQLEPT+SW LLR+DV+G SK
Sbjct: 1    MEEPGQLKRAFIDAAAGAIAGGISRTVTSPLDVIKIRFQVQLEPTTSWALLRRDVHGQSK 60

Query: 1074 YTGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIH 1253
            YTGM QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSKSEDHIH
Sbjct: 61   YTGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKSEDHIH 120

Query: 1254 LSPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLY 1433
            LSPYLS++SGALAGCAATVGSYPFDLLRTLLASQGEPKVY  MR+AFLDI++ RG  GLY
Sbjct: 121  LSPYLSFVSGALAGCAATVGSYPFDLLRTLLASQGEPKVYPKMRSAFLDIIRTRGFQGLY 180

Query: 1434 AGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXXCGLAA 1613
            AGL+PTLVEIIPYAGLQFGTYD FKRWTM WN++R                    CG AA
Sbjct: 181  AGLSPTLVEIIPYAGLQFGTYDMFKRWTMAWNQYR-SSNANLTGTDSISSFQLFLCGFAA 239

Query: 1614 GTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKG 1793
            GTCAKAVCHPLDVVKKRFQIEGL R PKYGARVEHRAY  M+DALR+IL  EGWAGLYKG
Sbjct: 240  GTCAKAVCHPLDVVKKRFQIEGLPRDPKYGARVEHRAYTNMYDALRQILLVEGWAGLYKG 299

Query: 1794 IVPSIIKAAPAGAVTFVAYEFTSDWLESILT 1886
            IVPSIIK+APAGAVTFVAYEFTSDWLES++T
Sbjct: 300  IVPSIIKSAPAGAVTFVAYEFTSDWLESMVT 330


>ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
            gi|223543992|gb|EEF45518.1| Mitochondrial deoxynucleotide
            carrier, putative [Ricinus communis]
          Length = 331

 Score =  517 bits (1332), Expect = e-144
 Identities = 260/331 (78%), Positives = 275/331 (83%)
 Frame = +3

Query: 894  MEEPGQLKRAFMDXXXXXXXXXXSRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSK 1073
            M EPGQ+KRA +D          SRTVTSPLDVIKIRFQVQLEPTSSW L+R ++ G SK
Sbjct: 1    MGEPGQIKRALIDTTAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWALVRGNMIGQSK 60

Query: 1074 YTGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIH 1253
            YTGM QA KDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK  A+GSSKSE+HI 
Sbjct: 61   YTGMLQAAKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTVAAGSSKSENHIQ 120

Query: 1254 LSPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLY 1433
            LSPYLSY+SGALAGCAATVGSYPFDLLRT+LASQGEPKVY TMR AF+DI++ RG  GLY
Sbjct: 121  LSPYLSYISGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRYAFIDIIRTRGFKGLY 180

Query: 1434 AGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXXCGLAA 1613
            AGL+PTLVEIIPYAGLQFGTYDTFKRW M WN  R                    CGLAA
Sbjct: 181  AGLSPTLVEIIPYAGLQFGTYDTFKRWMMAWNCRRSSSTSSTYIDNSPSSFQLFVCGLAA 240

Query: 1614 GTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKG 1793
            GTCAK VCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYR M DALRRILQAEGWAGLYKG
Sbjct: 241  GTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMADALRRILQAEGWAGLYKG 300

Query: 1794 IVPSIIKAAPAGAVTFVAYEFTSDWLESILT 1886
            I+PS IKAAPAGAVTFVAYEFTSDWLESILT
Sbjct: 301  ILPSTIKAAPAGAVTFVAYEFTSDWLESILT 331


>ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|222863492|gb|EEF00623.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  517 bits (1331), Expect = e-144
 Identities = 257/327 (78%), Positives = 272/327 (83%)
 Frame = +3

Query: 906  GQLKRAFMDXXXXXXXXXXSRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKYTGM 1085
            GQ+KRA +D          SRTVTSPLDVIKIRFQVQLEPTS W L+R +V  PSKYTGM
Sbjct: 13   GQIKRALIDATAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSLWALVRSNVTAPSKYTGM 72

Query: 1086 GQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHLSPY 1265
             QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+EDHI LSPY
Sbjct: 73   LQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSKTEDHIQLSPY 132

Query: 1266 LSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYAGLT 1445
            LSY SGALAGCAATVGSYPFDLLRT+LASQGEPKVY TMR+AF+DIV+ RG  GLYAGL+
Sbjct: 133  LSYASGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVRTRGFRGLYAGLS 192

Query: 1446 PTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXXCGLAAGTCA 1625
            PTLVEI+PYAGLQFGTYDTFKRWTM WN  +                    CGLAAGTCA
Sbjct: 193  PTLVEIVPYAGLQFGTYDTFKRWTMAWNHHKSSSTSSISTDDNLSSFQLFICGLAAGTCA 252

Query: 1626 KAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGIVPS 1805
            K VCHPLDVVKKRFQIEGLQRHPKYG RVEHRAYR M DALRRILQ EGWAGLYKGIVPS
Sbjct: 253  KLVCHPLDVVKKRFQIEGLQRHPKYGGRVEHRAYRNMFDALRRILQTEGWAGLYKGIVPS 312

Query: 1806 IIKAAPAGAVTFVAYEFTSDWLESILT 1886
             +KAAPAGAVTFVAYEFTSDWLESILT
Sbjct: 313  TVKAAPAGAVTFVAYEFTSDWLESILT 339


>ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  516 bits (1328), Expect = e-143
 Identities = 254/328 (77%), Positives = 273/328 (83%)
 Frame = +3

Query: 897  EEPGQLKRAFMDXXXXXXXXXXSRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKY 1076
            E PGQLKRA +D          SRTVTSPLDVIKIRFQVQLEPT SW L+R+++  PSKY
Sbjct: 1    EAPGQLKRALIDATAGAIAGGISRTVTSPLDVIKIRFQVQLEPTYSWDLVRRNMTAPSKY 60

Query: 1077 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHL 1256
            TGM QATKDIFREEGL GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+EDHIHL
Sbjct: 61   TGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSKTEDHIHL 120

Query: 1257 SPYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYA 1436
            SPYLSY+SGALAGC ATVGSYPFDLLRT+LASQGEPKVY TMR+AF+DI + RG  GLYA
Sbjct: 121  SPYLSYISGALAGCTATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDITRTRGFRGLYA 180

Query: 1437 GLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXXCGLAAG 1616
            GL+PTLVEI+PYAGLQFGTYDTFKRWTMGWN  R                    CGLAAG
Sbjct: 181  GLSPTLVEIVPYAGLQFGTYDTFKRWTMGWNHDRSSTTSFISTDDSLSSFQLFVCGLAAG 240

Query: 1617 TCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGI 1796
            TCAK VCHPLDVVKKRFQIEGLQRHP+YGARVEH AY+ M DAL RILQ EGWAGLYKGI
Sbjct: 241  TCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHHAYKNMFDALSRILQMEGWAGLYKGI 300

Query: 1797 VPSIIKAAPAGAVTFVAYEFTSDWLESI 1880
            VPS +KAAPAGAVTF+AYEFTSDWLESI
Sbjct: 301  VPSTVKAAPAGAVTFLAYEFTSDWLESI 328


>ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine
            max]
          Length = 328

 Score =  504 bits (1297), Expect = e-140
 Identities = 252/329 (76%), Positives = 276/329 (83%)
 Frame = +3

Query: 900  EPGQLKRAFMDXXXXXXXXXXSRTVTSPLDVIKIRFQVQLEPTSSWHLLRKDVYGPSKYT 1079
            EP QLKRA +D          SRTVTSPLDVIKIRFQVQLEPTSSW LLRKD+  PSKYT
Sbjct: 4    EPSQLKRAAIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWTLLRKDLSTPSKYT 63

Query: 1080 GMGQATKDIFREEGLKGFWRGNVPALLMVMPYGAIQFSVLHKLKAFASGSSKSEDHIHLS 1259
            GM QA+KDIFREEG+ GFWRGNVPALLMVMPY AIQF+VLHKLK FA+GSSK+E+HI+LS
Sbjct: 64   GMLQASKDIFREEGIWGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKTENHINLS 123

Query: 1260 PYLSYLSGALAGCAATVGSYPFDLLRTLLASQGEPKVYSTMRAAFLDIVKARGIPGLYAG 1439
            PYLSY+SGALAGCAATVGSYPFDLLRT+LASQGEPKVY  MRAA +DI++ RG  GLYAG
Sbjct: 124  PYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRAALVDILQTRGFRGLYAG 183

Query: 1440 LTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXXXXXXCGLAAGT 1619
            L+PTLVEIIPYAGLQFGTYDTFKRWTM WN+ ++                   CGLAAGT
Sbjct: 184  LSPTLVEIIPYAGLQFGTYDTFKRWTMAWNQRQY----SNPTAESLSSFQLFLCGLAAGT 239

Query: 1620 CAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQAEGWAGLYKGIV 1799
            CAK VCHPLDVVKKRFQIEGLQRHP+YGARVEHRAY+ M DA++RILQ EGWAGLYKGI+
Sbjct: 240  CAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDAMKRILQMEGWAGLYKGIL 299

Query: 1800 PSIIKAAPAGAVTFVAYEFTSDWLESILT 1886
            PS +KAAPAGAVTFVAYE T DWLESILT
Sbjct: 300  PSTVKAAPAGAVTFVAYELTVDWLESILT 328


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