BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001214
         (1917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   351   4e-94
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   347   8e-93
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   343   9e-92
ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycin...   341   5e-91
ref|XP_002312393.1| predicted protein [Populus trichocarpa] gi|2...   340   8e-91

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
            gi|297737829|emb|CBI27030.3| unnamed protein product
            [Vitis vinifera]
          Length = 397

 Score =  351 bits (900), Expect = 4e-94
 Identities = 184/238 (77%), Positives = 193/238 (81%)
 Frame = -1

Query: 1248 AGNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERAIEYLYSGIPEQAEVPPVIRXX 1069
            AGNN E  IQQILDMGGGTWDRD V RALRAAYNNPERA+EYLYSGIPEQAEVPPV R  
Sbjct: 165  AGNNFEEAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVARAP 224

Query: 1068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFPQGLPNVGSNAAGAGTLEFLRNSQQ 889
                                            DLFPQG+PNVGSN AGAGTL+FLRNSQQ
Sbjct: 225  ASGQAANPPAQSQQPVPAPSSGPNANPL----DLFPQGIPNVGSNPAGAGTLDFLRNSQQ 280

Query: 888  FQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGNVLGQL 709
            FQALR MVQANPQILQPMLQELGKQNP LMRLIQEHQADFLRLINEPVEGG EGN+LGQL
Sbjct: 281  FQALRAMVQANPQILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGG-EGNILGQL 339

Query: 708  AAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHINEFEE 535
            AAAMPQ+VTVTPEEREAI RLEAMGFDRA+VLEVFFACNKNEELAANYLLDH++EFE+
Sbjct: 340  AAAMPQAVTVTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFED 397



 Score =  118 bits (296), Expect = 5e-24
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = -2

Query: 1724 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 1545
            GTHFEI+V PEDTVADVK  IE VQG+DVYPA+QQMLIHQGKVLKDGT+L EN V+EN+F
Sbjct: 10   GTHFEIQVKPEDTVADVKANIEAVQGSDVYPASQQMLIHQGKVLKDGTTLDENKVAENSF 69

Query: 1544 LVIMLTKNKVSSGG 1503
            +V+ML+KNK SS G
Sbjct: 70   VVVMLSKNKNSSEG 83


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
            gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  347 bits (889), Expect = 8e-93
 Identities = 180/238 (75%), Positives = 194/238 (81%)
 Frame = -1

Query: 1248 AGNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERAIEYLYSGIPEQAEVPPVIRXX 1069
            AG+N EGTIQQILDMGGG+WDRD V RALRAAYNNPERA+EYLYSGIPEQAE PPV R  
Sbjct: 157  AGSNLEGTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEAPPVTREP 216

Query: 1068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFPQGLPNVGSNAAGAGTLEFLRNSQQ 889
                                            DLFPQGLPNVGS AAGAG+L+FLRNSQQ
Sbjct: 217  ASAQPANPPAAAPQAAQPASVPSSGPNANPL-DLFPQGLPNVGSGAAGAGSLDFLRNSQQ 275

Query: 888  FQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGNVLGQL 709
            FQALR MVQANPQILQPMLQELGKQNP+LMRLIQEHQ DFLRLINEPVEGG EGN+LGQL
Sbjct: 276  FQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGG-EGNILGQL 334

Query: 708  AAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHINEFEE 535
            A+AMPQ+VTVTPEER+AIERLEAMGFDRA VLEV+FACNKNEELAANYLLDH++EF+E
Sbjct: 335  ASAMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 392



 Score =  120 bits (300), Expect = 2e-24
 Identities = 58/73 (79%), Positives = 66/73 (90%)
 Frame = -2

Query: 1724 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 1545
            GTHFEIEV P DT+++VKK IETVQGADVYPAAQQMLIHQGKVLKDGT+L EN V+EN+F
Sbjct: 10   GTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLEENKVAENSF 69

Query: 1544 LVIMLTKNKVSSG 1506
            +VIML+K K SSG
Sbjct: 70   IVIMLSKTKSSSG 82


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223531394|gb|EEF33228.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 409

 Score =  343 bits (880), Expect = 9e-92
 Identities = 182/242 (75%), Positives = 193/242 (79%), Gaps = 4/242 (1%)
 Frame = -1

Query: 1248 AGNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERAIEYLYSGIPEQAEVPPVIRXX 1069
            AGNN EG IQQILDMGGGTWDRD V RALRAAYNNPERA+EYLYSGIPEQAEVPPV    
Sbjct: 170  AGNNLEGAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVA-PV 228

Query: 1068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFPQGLPNVGSNAAGAG----TLEFLR 901
                                           LDLFPQGLPN+GS  AGAG    TL+FLR
Sbjct: 229  SLSGQAANQPAQPQQPAQPAAVPSGGPNANPLDLFPQGLPNMGSGGAGAGAGAGTLDFLR 288

Query: 900  NSQQFQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGNV 721
            NSQQFQALR MVQANPQILQPMLQELGKQNPNL+RLIQEHQ DFLRLINEPVEGG EGN+
Sbjct: 289  NSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQTDFLRLINEPVEGG-EGNI 347

Query: 720  LGQLAAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHINEF 541
            +GQLAAAMPQ+VTVTPEEREAIERLEAMGFDR +VLEVFFACNKNEELAANYLLDH++EF
Sbjct: 348  MGQLAAAMPQAVTVTPEEREAIERLEAMGFDRGLVLEVFFACNKNEELAANYLLDHMHEF 407

Query: 540  EE 535
            E+
Sbjct: 408  ED 409



 Score =  114 bits (285), Expect = 9e-23
 Identities = 54/73 (73%), Positives = 65/73 (89%)
 Frame = -2

Query: 1724 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 1545
            GT F++EV PEDT+ADVKK+IET QGADVYPA QQMLI+QGKVLKD T++ EN V+EN+F
Sbjct: 10   GTTFDVEVKPEDTIADVKKSIETTQGADVYPAGQQMLIYQGKVLKDNTTIDENKVAENSF 69

Query: 1544 LVIMLTKNKVSSG 1506
            +VIMLTKNK S+G
Sbjct: 70   VVIMLTKNKSSTG 82


>ref|NP_001242098.1| uncharacterized protein LOC100813881 [Glycine max]
            gi|255641670|gb|ACU21107.1| unknown [Glycine max]
          Length = 400

 Score =  341 bits (874), Expect = 5e-91
 Identities = 178/238 (74%), Positives = 191/238 (80%)
 Frame = -1

Query: 1248 AGNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERAIEYLYSGIPEQAEVPPVIRXX 1069
            AG+N EGTIQQILDMGGG+WDRD V R LRAAYNNPERA+EYLYSGIPEQAE PPV    
Sbjct: 165  AGSNLEGTIQQILDMGGGSWDRDTVVRTLRAAYNNPERAVEYLYSGIPEQAEAPPVT-GV 223

Query: 1068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFPQGLPNVGSNAAGAGTLEFLRNSQQ 889
                                           LDLFPQGLPNVGS AAGAG+L+FLRNSQQ
Sbjct: 224  PASAQPSNPPADTPQAAQPASVPSSGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQ 283

Query: 888  FQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGNVLGQL 709
            FQALR MVQANPQILQPMLQELGKQNP+LMRLIQEHQ DFLRLINEPVEGG EGN+LGQL
Sbjct: 284  FQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGG-EGNILGQL 342

Query: 708  AAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHINEFEE 535
            A  MPQ+VTVTPEER+AIERLEAMGFDRA VLEV+FACNKNEELAANYLLDH++EF+E
Sbjct: 343  AGTMPQAVTVTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 400



 Score =  118 bits (295), Expect = 6e-24
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = -2

Query: 1724 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 1545
            GTHFEIEV P DT+++VKK IETVQGADVYPAAQQMLIHQGKVLKDGT+L EN V+E++F
Sbjct: 10   GTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLEENKVAESSF 69

Query: 1544 LVIMLTKNKVSSG 1506
            +VIML+K K SSG
Sbjct: 70   IVIMLSKTKSSSG 82


>ref|XP_002312393.1| predicted protein [Populus trichocarpa] gi|222852213|gb|EEE89760.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  340 bits (872), Expect = 8e-91
 Identities = 180/236 (76%), Positives = 188/236 (79%)
 Frame = -1

Query: 1248 AGNNREGTIQQILDMGGGTWDRDIVERALRAAYNNPERAIEYLYSGIPEQAEVPPVIRXX 1069
            AG+N E  +QQILDMGGGTWDRD V RALRAAYNNPERAIEYLYSGIPEQAE PPV    
Sbjct: 101  AGSNLEVAVQQILDMGGGTWDRDTVVRALRAAYNNPERAIEYLYSGIPEQAEAPPVAHMP 160

Query: 1068 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLFPQGLPNVGSNAAGAGTLEFLRNSQQ 889
                                            DLFPQGLPNVGS A GAGTL+FLRNSQQ
Sbjct: 161  LGGQAPAAQPQQHPTQTAAVPSGGPNANPL--DLFPQGLPNVGSGAGGAGTLDFLRNSQQ 218

Query: 888  FQALRTMVQANPQILQPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGNVLGQL 709
            FQALR MVQANPQILQPMLQELGKQNP+LMRLIQEHQ DFLRLINEPVE G EGNVLGQL
Sbjct: 219  FQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQDDFLRLINEPVESG-EGNVLGQL 277

Query: 708  AAAMPQSVTVTPEEREAIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHINEF 541
            AAAMPQ+VTVTPEEREAIERLEAMGFDRA+VLEVFFACNKNEELAANYLLDH++EF
Sbjct: 278  AAAMPQAVTVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEF 333



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 49/72 (68%), Positives = 58/72 (80%)
 Frame = -2

Query: 1724 GTHFEIEVTPEDTVADVKKTIETVQGADVYPAAQQMLIHQGKVLKDGTSLGENNVSENNF 1545
            G+ F+IEV PEDTVADVKK IET QG  VYPA QQMLIHQ KVLKD T+L EN + EN+F
Sbjct: 10   GSTFDIEVKPEDTVADVKKKIETAQGVAVYPAEQQMLIHQAKVLKDNTTLDENKIVENSF 69

Query: 1544 LVIMLTKNKVSS 1509
            +VIML+K + +S
Sbjct: 70   VVIMLSKVRFAS 81