BLASTX nr result

ID: Coptis23_contig00001201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001201
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15270.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002267314.1| PREDICTED: uncharacterized protein LOC100262...    93   2e-17
ref|XP_002309131.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_003609007.1| Unc-13-like protein [Medicago truncatula] gi...    92   4e-17
ref|XP_002323568.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>emb|CBI15270.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/60 (73%), Positives = 48/60 (80%)
 Frame = +3

Query: 3    TRLFIGXXXXXXXXXXXXPPKMVAVALGFYFLRHPMFREPMPPASLNFFRRLPSLTDRLM 182
            T+LFIG            PPKMVAVA+GFYFLRHPMFR+PMPPASLNFFRRLPSL+DRLM
Sbjct: 851  TKLFIGVCLIVTVVLYAVPPKMVAVAIGFYFLRHPMFRDPMPPASLNFFRRLPSLSDRLM 910


>ref|XP_002267314.1| PREDICTED: uncharacterized protein LOC100262158 [Vitis vinifera]
          Length = 1009

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/60 (73%), Positives = 48/60 (80%)
 Frame = +3

Query: 3    TRLFIGXXXXXXXXXXXXPPKMVAVALGFYFLRHPMFREPMPPASLNFFRRLPSLTDRLM 182
            T+LFIG            PPKMVAVA+GFYFLRHPMFR+PMPPASLNFFRRLPSL+DRLM
Sbjct: 950  TKLFIGVCLIVTVVLYAVPPKMVAVAIGFYFLRHPMFRDPMPPASLNFFRRLPSLSDRLM 1009


>ref|XP_002309131.1| predicted protein [Populus trichocarpa] gi|222855107|gb|EEE92654.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/60 (73%), Positives = 48/60 (80%)
 Frame = +3

Query: 3    TRLFIGXXXXXXXXXXXXPPKMVAVALGFYFLRHPMFREPMPPASLNFFRRLPSLTDRLM 182
            T+LFIG            PPKMVAVALGFY+LRHPMFR+PMPPASLNFFRRLPSL+DRLM
Sbjct: 964  TKLFIGVCLAITLILYVVPPKMVAVALGFYYLRHPMFRDPMPPASLNFFRRLPSLSDRLM 1023


>ref|XP_003609007.1| Unc-13-like protein [Medicago truncatula] gi|355510062|gb|AES91204.1|
            Unc-13-like protein [Medicago truncatula]
          Length = 1036

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/60 (73%), Positives = 47/60 (78%)
 Frame = +3

Query: 3    TRLFIGXXXXXXXXXXXXPPKMVAVALGFYFLRHPMFREPMPPASLNFFRRLPSLTDRLM 182
            T+LFIG            PPKMVAVALGFY+LRHPMFR PMPPASLNFFRRLPSL+DRLM
Sbjct: 977  TKLFIGVCLVIAVILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM 1036


>ref|XP_002323568.1| predicted protein [Populus trichocarpa] gi|222868198|gb|EEF05329.1|
            predicted protein [Populus trichocarpa]
          Length = 1053

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/60 (73%), Positives = 47/60 (78%)
 Frame = +3

Query: 3    TRLFIGXXXXXXXXXXXXPPKMVAVALGFYFLRHPMFREPMPPASLNFFRRLPSLTDRLM 182
            T+LFI             PPKMVAVALGFYFLRHPMFR+PMPPASLNFFRRLPSL+DRLM
Sbjct: 994  TKLFIAVCLAITLILYVVPPKMVAVALGFYFLRHPMFRDPMPPASLNFFRRLPSLSDRLM 1053


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