BLASTX nr result
ID: Coptis23_contig00001197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001197
(2761 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003592939.1| PHD finger protein 21A [Medicago truncatula]... 86 7e-14
emb|CBI28490.3| unnamed protein product [Vitis vinifera] 75 7e-11
ref|XP_002889380.1| hypothetical protein ARALYDRAFT_887342 [Arab... 74 2e-10
ref|XP_004144625.1| PREDICTED: uncharacterized protein LOC101213... 74 2e-10
ref|XP_002301900.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-10
>ref|XP_003592939.1| PHD finger protein 21A [Medicago truncatula]
gi|355481987|gb|AES63190.1| PHD finger protein 21A
[Medicago truncatula]
Length = 473
Score = 85.5 bits (210), Expect = 7e-14
Identities = 112/465 (24%), Positives = 187/465 (40%), Gaps = 37/465 (7%)
Frame = +1
Query: 214 WGWAMETLADFKRINSSTLDELLKNVPNEEVESLKATTATHRIGLRC---------PNTT 366
W +E LA FK I TL L+ + + T I L+C +TT
Sbjct: 11 WHCVIEALAGFKEITLPTLQALIDASLLTHHDF--SETTKDLIALKCLEELYPSSSSSTT 68
Query: 367 NHDLPSSSEPTQNLYRGLVHKLA----NTSIPEASMLDSCIKDVSQFVGSKNSQLPKCTL 534
+ SS +Q++ ++H+++ TS PE D V++F+ K + KC L
Sbjct: 69 TLEELDSSLSSQDVLLQILHQVSLSNLRTSGPELFKWD-----VNRFIAHKRADNVKCQL 123
Query: 535 QEVKEALINGRHPSAAKLWGLSGLKGKYQEQPARQLAC----------SETGGNIQTQEA 684
+++KE++++G P L SGL +Q A C E ++
Sbjct: 124 EKLKESILDGTLPLNDHLKERSGL---FQTNRAHTGKCYGYSTYAQDSGEKENSVSLIPE 180
Query: 685 NPGCLVSE----IQDNALQGNPHAKSSNPT--TEETTKRKEDQNLAGIGTTNRVYNASNG 846
+ CL S+ N + + H K SN + T + K ++D ++ N V
Sbjct: 181 DNNCLSSKRNRVYSANEHEPDLHLKGSNLSQKTVSSDKSQDDTSVYQCENLNLVMKRRKK 240
Query: 847 SKQSMEIPESHA--VNEISSPP--APENAMEIMQDGPPLXXXXXXXXXXXXXXLKDCMN- 1011
+ + V+E +S P PE+ + ++ + P ++ C N
Sbjct: 241 DSHDKKFNKGSQLLVSEATSVPLLVPESCIGMLTNIYP----------RHTSGVEPCRNK 290
Query: 1012 VEKTSMDTVVLKLGGQNLDPLPACEPPRGRRAQDLGKNGACADDGGKIQQVFSKRLRTTV 1191
+ + DTV +++P+P + + Q K A K + TV
Sbjct: 291 LIDEANDTV-------HVEPIPTNDDGNADKVQARQKPAAS-----------DKAVVDTV 332
Query: 1192 N--GGESSHGMNVTIGKFPFSSPSEDMEFATVNNSLFNSQIASTED-SLDTDWAEDYSCI 1362
N G E S +V +E ++ + +SQ AS +D T+ C
Sbjct: 333 NDCGAELSSDSDVYY--------NEKIDLTAIKAEFLSSQHASGQDLPAMTESRGQNLCS 384
Query: 1363 KCNKGGHLLICSSCKLAVHQSCLGFSASSNDLDSFLCPVCSYSQA 1497
KCN+ G LL+C++C L +H++CLG SA +FLCP C YS A
Sbjct: 385 KCNEAGQLLVCTTCPLMLHKNCLGDSAQLEAKGNFLCPFCKYSHA 429
>emb|CBI28490.3| unnamed protein product [Vitis vinifera]
Length = 566
Score = 75.5 bits (184), Expect = 7e-11
Identities = 69/256 (26%), Positives = 99/256 (38%), Gaps = 20/256 (7%)
Frame = +1
Query: 1711 QQETEAACDCNDGTEIVLNGHEYAVLGPS---DADLHQQLVN------YSSPVMGRNSDS 1863
QQE E DC+ E L+G +++VL DA + ++ + P + +
Sbjct: 345 QQEAEPLNDCHLEEETTLDG-DFSVLTKGKKVDAKMTEENLGRREEEEQMQPQAQETTTA 403
Query: 1864 PCGGTETVLTSHEHTDVGVEYPDLQQPDTRQQGHYPPADATVDLPCVNRETVLNDPKLVD 2043
GG L HE ++G D C T+L + V
Sbjct: 404 IPGGDPASLV-HEKVNIGFRIID---------------------SCRGARTLLTHQRHVG 441
Query: 2044 ARNAEQQLLHSVEGRLPSLDDNTKETSKHKNDQXXXXXXXXXXXXXXXXHVNVKNGGKRA 2223
R + + +V+ + S D K+ D V K
Sbjct: 442 QRAKNKMVSQNVDSQKKSSPDLHNNAEKNAGDGTK----------------EVIVSSKSI 485
Query: 2224 NPRNPLK-----------RKKFTWSSEEEMKLQEGVEIYGKADTKNVPWRKILDFGRGVF 2370
PR P K RKK W ++EE L+EGV+ + KN+PWRKIL+FGR VF
Sbjct: 486 QPRGPSKQLTNQIFPNERRKKLLWKTDEEEMLKEGVQKFSATGDKNLPWRKILEFGRHVF 545
Query: 2371 HEGRTAANLKDKWRRM 2418
RT +LKDKWR+M
Sbjct: 546 DGTRTPVDLKDKWRKM 561
Score = 66.2 bits (160), Expect = 4e-08
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = +1
Query: 1312 STEDSLDTDWAEDYSCIKCNKGGHLLICSS--CKLAVHQSCLGFSASSNDLDSFLCPVCS 1485
ST+ ++ +W + CIKC +GG +L+CS C+LAVH+ C+ SA+ +D+ F CP C
Sbjct: 117 STQAWMEIEWTQQSKCIKCGEGGEVLVCSDRVCRLAVHEKCMNCSAAFDDMGDFYCPYCW 176
Query: 1486 Y 1488
Y
Sbjct: 177 Y 177
>ref|XP_002889380.1| hypothetical protein ARALYDRAFT_887342 [Arabidopsis lyrata subsp.
lyrata] gi|297335222|gb|EFH65639.1| hypothetical protein
ARALYDRAFT_887342 [Arabidopsis lyrata subsp. lyrata]
Length = 293
Score = 74.3 bits (181), Expect = 2e-10
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +1
Query: 2242 KRKKFTWSSEEEMKLQEGVEIYGKADTKNVPWRKILDFGRGVFHEGRTAANLKDKWRRM 2418
+RK+ W+++EE L+ GVEI+ KN+PW+KIL+ G+G+FH+ R +++LKDKWR M
Sbjct: 232 QRKRVLWTAKEENMLRVGVEIFAATINKNIPWKKILEMGKGIFHKTRNSSDLKDKWRNM 290
>ref|XP_004144625.1| PREDICTED: uncharacterized protein LOC101213119 [Cucumis sativus]
gi|449520068|ref|XP_004167056.1| PREDICTED:
uncharacterized LOC101213119 [Cucumis sativus]
Length = 510
Score = 73.9 bits (180), Expect = 2e-10
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = +1
Query: 2242 KRKKFTWSSEEEMKLQEGVEIYGKADTKNVPWRKILDFGRGVFHEGRTAANLKDKWRRM 2418
KRK+ WS EEE L+EGV + KN+PWRKIL+FGR +F + RT +LKDKWR +
Sbjct: 449 KRKRMRWSVEEEEMLKEGVRKFSSTTNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRSL 507
Score = 58.5 bits (140), Expect = 9e-06
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Frame = +1
Query: 1174 RLRTTVNGGESSHGMNVTIGKFPF-SSPSEDMEFATV-NNSLFNSQIASTEDSLDT-DWA 1344
R++T G +VT P SSP D + V +N+L ++ T+D LD D
Sbjct: 2 RIKTRRGGRCKPSRRSVTSTPSPMASSPLPDQDVPNVEDNTLHDASNKETDDVLDKIDCF 61
Query: 1345 EDYSCIKCNKGGHLLICSS--CKLAVHQSCLGFSASSNDLDSFLCPVCSYSQA 1497
+ +C +C++ G LL+C+ C +A+H+ C+ S ++ F CP CSY +A
Sbjct: 62 QKDTCTRCDESGDLLVCTEPGCPIALHELCMSCEPSFDEDGRFYCPYCSYKRA 114
>ref|XP_002301900.1| predicted protein [Populus trichocarpa] gi|222843626|gb|EEE81173.1|
predicted protein [Populus trichocarpa]
Length = 472
Score = 72.4 bits (176), Expect = 6e-10
Identities = 34/64 (53%), Positives = 43/64 (67%)
Frame = +1
Query: 2227 PRNPLKRKKFTWSSEEEMKLQEGVEIYGKADTKNVPWRKILDFGRGVFHEGRTAANLKDK 2406
PRN KR++ W+++EE L+EGVE + KN PWRKIL+FG VF RT +LKDK
Sbjct: 408 PRNE-KRQRLNWTADEEDTLKEGVEKFAIPGNKNTPWRKILEFGHRVFDSTRTPTDLKDK 466
Query: 2407 WRRM 2418
WR M
Sbjct: 467 WRNM 470