BLASTX nr result

ID: Coptis23_contig00001193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001193
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   426   e-117
ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-...   415   e-113
emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]   414   e-113
ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
gb|ACU22780.1| unknown [Glycine max]                                  412   e-112

>ref|XP_003547771.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  426 bits (1094), Expect = e-117
 Identities = 208/274 (75%), Positives = 233/274 (85%), Gaps = 1/274 (0%)
 Frame = +2

Query: 224  SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 403
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 404  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 583
            EEDSR+A+QLD NSVKAHYM+GL+LL+R E A+G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYMLGLALLQRQESAKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 584  ELAKAKYLEWEHASSQRSWKLQSLKEACDKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 760
            ELAKAKYLEWE +SS+RSW+LQSLKEAC+ AL+ ++ LD SQ  G  D  T S+ EQL  
Sbjct: 125  ELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTSHSEQLEA 184

Query: 761  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 940
            LE+VF  A E DIPTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185  LERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 941  TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 1042
            TREPL   QL+ NLAIKEAV AFL +HGWAYK D
Sbjct: 245  TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKID 278


>ref|XP_003520993.1| PREDICTED: E3 ubiquitin-protein ligase CHIP-like [Glycine max]
          Length = 278

 Score =  415 bits (1067), Expect = e-113
 Identities = 203/274 (74%), Positives = 228/274 (83%), Gaps = 1/274 (0%)
 Frame = +2

Query: 224  SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 403
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 404  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 583
            EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 584  ELAKAKYLEWEHASSQRSWKLQSLKEACDKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 760
            ELAKAKYLEWE  SS+RSW+LQ LKEAC+ AL+ ++ LD SQ  G  D  T S  EQL  
Sbjct: 125  ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKHFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 761  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 940
            LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQKVGKFDPI
Sbjct: 185  LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKVGKFDPI 244

Query: 941  TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 1042
            TREPL   QL+ NLAIKEAV AFL +HGWAYK +
Sbjct: 245  TREPLDPSQLVPNLAIKEAVEAFLDKHGWAYKIE 278


>emb|CAN63106.1| hypothetical protein VITISV_000496 [Vitis vinifera]
          Length = 276

 Score =  414 bits (1064), Expect = e-113
 Identities = 201/270 (74%), Positives = 230/270 (85%), Gaps = 1/270 (0%)
 Frame = +2

Query: 236  KQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRVEEDS 415
            KQAE  R DGN  FKK RF AAIDAYTEAITLCPNV +YWTNRAL H KRN+W+RVEED 
Sbjct: 7    KQAEQLRLDGNTYFKKGRFAAAIDAYTEAITLCPNVPIYWTNRALGHRKRNNWTRVEEDC 66

Query: 416  RRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQELAK 595
            RRA+QLD NSVKAHYM+GL+LL+R EYAEGVK+LEKALDLGRGANPK YMVE+IWQELAK
Sbjct: 67   RRAIQLDSNSVKAHYMLGLALLQREEYAEGVKELEKALDLGRGANPKGYMVEEIWQELAK 126

Query: 596  AKYLEWEHASSQRSWKLQSLKEACDKALEVQYLLDTSQ-SGITDITTNSYIEQLTTLEQV 772
            AKY+EWEH S++RSW+LQ+LKEAC+ AL+ ++L D+S+  G  D    S +EQL  L++V
Sbjct: 127  AKYMEWEHESTKRSWELQTLKEACETALKEKHLFDSSELEGFLDEIPRSNLEQLEALDRV 186

Query: 773  FGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPITREP 952
            F  A E D+PT+VPDYLCC ITLDIFRDPVI PSG+TYER VLLDHL+KVGKFDPITREP
Sbjct: 187  FRIAAEADLPTDVPDYLCCKITLDIFRDPVIAPSGLTYEREVLLDHLEKVGKFDPITREP 246

Query: 953  LYEHQLISNLAIKEAVHAFLKEHGWAYKTD 1042
            L + QL+SNLAIKEAV AFL EHGWAYKTD
Sbjct: 247  LSQSQLVSNLAIKEAVQAFLDEHGWAYKTD 276


>ref|XP_002303074.1| predicted protein [Populus trichocarpa] gi|222844800|gb|EEE82347.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  413 bits (1061), Expect = e-113
 Identities = 199/278 (71%), Positives = 235/278 (84%), Gaps = 4/278 (1%)
 Frame = +2

Query: 221  LSAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSR 400
            LS   K+A+  RQ+GN CF KDRF AAIDAYT AITLCP V VYWTNRALCH KRNDW+R
Sbjct: 8    LSDEEKRADKLRQEGNICFSKDRFQAAIDAYTAAITLCPKVPVYWTNRALCHRKRNDWTR 67

Query: 401  VEEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIW 580
            VEEDSR+A+QLDH SVKAHYM+GL+LL++ EY+EGVK+LEKALDLGRGANP  YMVE+IW
Sbjct: 68   VEEDSRKAIQLDHYSVKAHYMLGLALLQKQEYSEGVKELEKALDLGRGANPNGYMVEEIW 127

Query: 581  QELAKAKYLEWEHASSQRSWKLQSLKEACDKALEVQYLLDTSQS-GITD---ITTNSYIE 748
            +ELAKAKYLEWE  S+QRSW+LQSLKEAC++AL+ ++ LD S++ G  D   ++  S+++
Sbjct: 128  EELAKAKYLEWEEESTQRSWELQSLKEACERALKEKHFLDDSETEGFLDDPIVSIVSHLQ 187

Query: 749  QLTTLEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGK 928
            QL  L QVF KA EDD P+EVPDYLCC ITLDI RDPVITPSGV+YERAVLLDHL+KVG 
Sbjct: 188  QLELLGQVFQKAAEDDTPSEVPDYLCCKITLDILRDPVITPSGVSYERAVLLDHLEKVGN 247

Query: 929  FDPITREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 1042
            FDP+TREPL   QL+ NLAIKEAVHA+L +HGWAYKT+
Sbjct: 248  FDPVTREPLEPSQLVPNLAIKEAVHAYLDKHGWAYKTE 285


>gb|ACU22780.1| unknown [Glycine max]
          Length = 278

 Score =  412 bits (1059), Expect = e-112
 Identities = 202/274 (73%), Positives = 226/274 (82%), Gaps = 1/274 (0%)
 Frame = +2

Query: 224  SAVVKQAEMRRQDGNFCFKKDRFGAAIDAYTEAITLCPNVAVYWTNRALCHMKRNDWSRV 403
            +A  KQAE  R DGN  FKKDRFGAAIDAYTEAITLCPNV VYWTNRALCH+KRNDW RV
Sbjct: 5    AAAAKQAEKLRIDGNTYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHLKRNDWERV 64

Query: 404  EEDSRRALQLDHNSVKAHYMMGLSLLERHEYAEGVKKLEKALDLGRGANPKSYMVEKIWQ 583
            EEDSR+A+QLD NSVKAHY++GL+LL+R E  +G+K+LEKALDLGRGANPK YMVE+IWQ
Sbjct: 65   EEDSRKAIQLDSNSVKAHYILGLALLQRQESVKGIKELEKALDLGRGANPKGYMVEEIWQ 124

Query: 584  ELAKAKYLEWEHASSQRSWKLQSLKEACDKALEVQYLLDTSQ-SGITDITTNSYIEQLTT 760
            ELAKAKYLEWE  SS+RSW+LQ LKEAC+ AL+ +Y LD SQ  G  D  T S  EQL  
Sbjct: 125  ELAKAKYLEWERLSSKRSWELQCLKEACESALKEKYFLDFSQMEGFVDDATTSQSEQLEA 184

Query: 761  LEQVFGKAGEDDIPTEVPDYLCCNITLDIFRDPVITPSGVTYERAVLLDHLQKVGKFDPI 940
            LE+VF  A E D PTEVPDYLCC ITLDIF DPVITPSG+TYERAV+L+HLQK GKFDPI
Sbjct: 185  LERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQKGGKFDPI 244

Query: 941  TREPLYEHQLISNLAIKEAVHAFLKEHGWAYKTD 1042
            TREPL   Q + NLAIKEAV AFL +HGWAYK +
Sbjct: 245  TREPLDPSQSVPNLAIKEAVEAFLDKHGWAYKIE 278


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