BLASTX nr result

ID: Coptis23_contig00001172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001172
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325046.1| AP2 domain-containing transcription factor [...   191   1e-46
ref|XP_002329654.1| AP2 domain-containing transcription factor [...   191   2e-46
gb|ABK93482.1| unknown [Populus trichocarpa]                          191   2e-46
ref|XP_003541472.1| PREDICTED: AP2-like ethylene-responsive tran...   173   4e-41
ref|XP_003549414.1| PREDICTED: AP2-like ethylene-responsive tran...   173   4e-41

>ref|XP_002325046.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222866480|gb|EEF03611.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 540

 Score =  191 bits (486), Expect = 1e-46
 Identities = 111/203 (54%), Positives = 133/203 (65%), Gaps = 10/203 (4%)
 Frame = +2

Query: 2   RHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVK 181
           RHHQHGRWQARIGRVAGNKDLYLGTFSTQ      YDIAAIKFRGLNAVTNFDMSRYDVK
Sbjct: 274 RHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK 333

Query: 182 SIASSSLPIGGDSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXXFASQPSLSTTLSFA 352
           SIA+S+LPIGG S K K SS+                         FASQP+ S TLSFA
Sbjct: 334 SIANSNLPIGGISGKSKNSSESVSDSKSIDVSRSDDRDLSSASSVTFASQPTTS-TLSFA 392

Query: 353 LPIKQDPIDYW-SLLGYXXXXXXXXXXXXSTTLF--QSCLTNGSDFQSVSNP---NMDYS 514
           +PIKQDP DYW ++LGY            S+++    + L + + F +   P   +MD++
Sbjct: 393 MPIKQDPSDYWTNILGYQNSTTTMNNTKNSSSIVAPSTLLQSSTSFHAFQGPTAFSMDFN 452

Query: 515 TNSDINQSSNR-VLNDGGYIQQQ 580
           TNS +N+S+N  +L +GGYIQQQ
Sbjct: 453 TNSSVNESNNSGLLFNGGYIQQQ 475


>ref|XP_002329654.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222870535|gb|EEF07666.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 542

 Score =  191 bits (484), Expect = 2e-46
 Identities = 114/204 (55%), Positives = 132/204 (64%), Gaps = 11/204 (5%)
 Frame = +2

Query: 2   RHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVK 181
           RHHQHGRWQARIGRVAGNKDLYLGTFSTQ      YDIAAIKFRGLNAVTNFDMSRYDVK
Sbjct: 278 RHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK 337

Query: 182 SIASSSLPIGGDSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXXFASQPSLSTTLSFA 352
           +IA+S+LPIGG S K K SS+                         FASQP+ S TLSFA
Sbjct: 338 NIANSNLPIGGISGKSKNSSESASDSKSIDGSRSDDRDLSSASSVTFASQPATS-TLSFA 396

Query: 353 LPIKQDPIDYW-SLLGYXXXXXXXXXXXXS------TTLFQSCLTNGSDFQSVSNPNMDY 511
           +PIKQDP DYW ++LGY            S      +TL QS  T+G  FQS +   MD+
Sbjct: 397 IPIKQDPSDYWTNILGYQNTTTMNNAKNSSSSIVDPSTLLQSS-TSGPAFQSPTVFKMDF 455

Query: 512 STNSDINQSSNR-VLNDGGYIQQQ 580
           + NS +N+S+N  +L +GGY QQQ
Sbjct: 456 NANSSVNESNNNGLLFNGGYTQQQ 479


>gb|ABK93482.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  191 bits (484), Expect = 2e-46
 Identities = 114/204 (55%), Positives = 132/204 (64%), Gaps = 11/204 (5%)
 Frame = +2

Query: 2   RHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVK 181
           RHHQHGRWQARIGRVAGNKDLYLGTFSTQ      YDIAAIKFRGLNAVTNFDMSRYDVK
Sbjct: 281 RHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK 340

Query: 182 SIASSSLPIGGDSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXXFASQPSLSTTLSFA 352
           +IA+S+LPIGG S K K SS+                         FASQP+ S TLSFA
Sbjct: 341 NIANSNLPIGGISGKSKNSSESASDSKSIDGSRSDDRDLSSASSVTFASQPATS-TLSFA 399

Query: 353 LPIKQDPIDYW-SLLGYXXXXXXXXXXXXS------TTLFQSCLTNGSDFQSVSNPNMDY 511
           +PIKQDP DYW ++LGY            S      +TL QS  T+G  FQS +   MD+
Sbjct: 400 IPIKQDPSDYWTNILGYQNTTTMNNAKNSSSSIVDPSTLLQSS-TSGPAFQSPTVFKMDF 458

Query: 512 STNSDINQSSNR-VLNDGGYIQQQ 580
           + NS +N+S+N  +L +GGY QQQ
Sbjct: 459 NANSSVNESNNNGLLFNGGYTQQQ 482


>ref|XP_003541472.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL5-like [Glycine max]
          Length = 528

 Score =  173 bits (438), Expect = 4e-41
 Identities = 105/204 (51%), Positives = 124/204 (60%), Gaps = 9/204 (4%)
 Frame = +2

Query: 2   RHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVK 181
           RHHQHGRWQARIGRVAGNKDLYLGTFSTQ      YDIAAIKFRGLNAVTNFDMSRYDVK
Sbjct: 255 RHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK 314

Query: 182 SIASSSLPIGGDSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXXFAS--QPSLSTTLS 346
           SIA+S+LPIGG S K K S+D   +                     FAS  QPS S+TLS
Sbjct: 315 SIANSTLPIGGLSGKNKNSTDSASESKSHEASRSDERDPSAASSVTFASQQQPS-SSTLS 373

Query: 347 FALPIKQDPIDYWSLLGYXXXXXXXXXXXXSTTLFQSCL--TNGSDFQSVSNPNMDYSTN 520
           FA+PIKQDP DYWS+LGY            +T++  +    +N     S++  +M++S  
Sbjct: 374 FAIPIKQDPSDYWSILGYHNSPLDNTGIRNTTSVTATSFPSSNNGTTSSLTPFHMEFSNA 433

Query: 521 SDINQSSN--RVLNDGGYIQQQQN 586
                S N     + GG   QQQ+
Sbjct: 434 PTSTGSDNDAAFFSGGGIFVQQQS 457


>ref|XP_003549414.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           AIL5-like [Glycine max]
          Length = 530

 Score =  173 bits (438), Expect = 4e-41
 Identities = 108/205 (52%), Positives = 122/205 (59%), Gaps = 11/205 (5%)
 Frame = +2

Query: 2   RHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGLNAVTNFDMSRYDVK 181
           RHHQHGRWQARIGRVAGNKDLYLGTFSTQ      YDIAAIKFRGLNAVTNFDMSRYDVK
Sbjct: 259 RHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVK 318

Query: 182 SIASSSLPIGGDSSKPKASSD--QXXXXXXXXXXXXXXXXXXXXXFAS--QPSLSTTLSF 349
           SIA+S+LPIGG S K K S+D                        FAS  QPS S+ LSF
Sbjct: 319 SIANSTLPIGGLSGKNKNSTDSASESKSHEPSQSDGDPSSASSVTFASQQQPS-SSNLSF 377

Query: 350 ALPIKQDPIDYWSLLGY-----XXXXXXXXXXXXSTTLFQSCLTNGSDFQSVSNPNMDYS 514
           A+PIKQDP DYWS+LGY                 +TT F S  +N     S++  NM++S
Sbjct: 378 AIPIKQDPSDYWSILGYHNTPLDNSGIRNTTSTVTTTTFPS--SNNGTASSLTPFNMEFS 435

Query: 515 TNSDINQSSNRV--LNDGGYIQQQQ 583
           +      S N     + GG   QQQ
Sbjct: 436 SAPSSTGSDNNAAFFSGGGIFVQQQ 460


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