BLASTX nr result

ID: Coptis23_contig00001149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001149
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275902.2| PREDICTED: ABC transporter B family member 2...   550   e-154
gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]      529   e-148
ref|XP_002319987.1| ABC transporter family of the mitochondria f...   526   e-147
ref|XP_004139927.1| PREDICTED: ABC transporter B family member 2...   523   e-146
ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arab...   520   e-145

>ref|XP_002275902.2| PREDICTED: ABC transporter B family member 25, mitochondrial-like
            [Vitis vinifera] gi|297745734|emb|CBI15790.3| unnamed
            protein product [Vitis vinifera]
          Length = 726

 Score =  550 bits (1416), Expect = e-154
 Identities = 298/428 (69%), Positives = 337/428 (78%), Gaps = 23/428 (5%)
 Frame = -3

Query: 1216 SYRRTFIGSSQQYILSTSYGNNRVLGKLNRRGF----------------YVNGFLSDYAS 1085
            S  R F G+S++++L  S+ NN  +   N R                  ++N FLSD   
Sbjct: 6    SCSRLFSGNSKRFLLRYSHRNNSTINICNGRELGIARNLNITRRIHFFRHLNSFLSDSPP 65

Query: 1084 S-NGNKPYSEPG-----GHALFSTST-GNIAGTNHVAKRTDDKAVKKGNSEEQIADVKIL 926
            S     PY         G+ALFSTST G++  T  V K+   K V    S+E  AD+KIL
Sbjct: 66   SYRPPSPYHRHPSWTLKGYALFSTSTAGDVTATKQVGKKNQAKVV----SDEHAADMKIL 121

Query: 925  KTLAKYLWSKDNFEFRFRVVLALSLLVTAKVLNVQVPFLFKHAVDWLSVASGAGGQLASF 746
            +TLAKYLWSKDN EFRFRV++AL  LV AKVLNVQVPFLFK AVDWL+  +G    LASF
Sbjct: 122  RTLAKYLWSKDNPEFRFRVIMALGFLVGAKVLNVQVPFLFKLAVDWLTTTTGNATALASF 181

Query: 745  STANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVASRTIRTVSRQVFAHLHN 566
            +TANST LALFVSPAAVLVGYGIAR+GASA NELR AVFSKVA RTIR+VSR+VF+HLH+
Sbjct: 182  TTANSTALALFVSPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRRVFSHLHD 241

Query: 565  LDLRYHLSRQTGALNRIIDRGSRGINFILSAMVFNVAPTILEISMVSGILAYKFGASFAW 386
            LDL+YHLSR+TGALNRIIDRGSR INFILS+MVFN+ PTILEISMV+GILAYKFGASFAW
Sbjct: 242  LDLQYHLSRETGALNRIIDRGSRAINFILSSMVFNIVPTILEISMVAGILAYKFGASFAW 301

Query: 385  ITSLSVVAYAAFTLVVTQWRTKFRQAMNKADNDASSRAIDSLINYETVKYFNNEGYETEK 206
            ITSLSV AY AFTL VTQWRTKFR+ MNKADNDAS+RAIDSLINYETVKYFN+E +E EK
Sbjct: 302  ITSLSVAAYVAFTLAVTQWRTKFRKIMNKADNDASTRAIDSLINYETVKYFNSEAFEVEK 361

Query: 205  YDEFLKKYEDASLKTQSSLAYLNFGQNVIFSTALSAAMVLCSHGIMNGEMTVGDLVMVNG 26
            YDE LK+YEDA+LKTQ SLA+LNFGQN+IFSTALS AMVLCSHGIMNGEMTVGDLVMVNG
Sbjct: 362  YDELLKRYEDAALKTQRSLAFLNFGQNLIFSTALSTAMVLCSHGIMNGEMTVGDLVMVNG 421

Query: 25   LLFQLSLP 2
            LLFQLSLP
Sbjct: 422  LLFQLSLP 429


>gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 533

 Score =  529 bits (1362), Expect = e-148
 Identities = 274/383 (71%), Positives = 313/383 (81%), Gaps = 6/383 (1%)
 Frame = -3

Query: 1132 NRRGFYVNGFLSDYASSNGNKPYSEPG----GHALFSTSTG--NIAGTNHVAKRTDDKAV 971
            +RR   +N FLS+ ASS+   P+  P     GHALFST +   +  G  + A  +     
Sbjct: 81   HRRYLNLNAFLSNPASSSSTPPFRPPNSVLNGHALFSTMSAPKDKDGVANKAPPSSSATT 140

Query: 970  KKGNSEEQIADVKILKTLAKYLWSKDNFEFRFRVVLALSLLVTAKVLNVQVPFLFKHAVD 791
                S++Q+AD KIL+TLA YLW +DN EFR RVVLAL  LV AKVLNVQVPFLFK AVD
Sbjct: 141  ATNKSDQQVADTKILRTLASYLWMEDNPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVD 200

Query: 790  WLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVASR 611
            WL+ A+G    LASF+TANST+LALF +PA+VL+GYGIAR G+SA NELR AVFSKVA R
Sbjct: 201  WLTTATGNAAALASFTTANSTLLALFATPASVLIGYGIARTGSSAFNELRTAVFSKVALR 260

Query: 610  TIRTVSRQVFAHLHNLDLRYHLSRQTGALNRIIDRGSRGINFILSAMVFNVAPTILEISM 431
            TIR+VSR+VF+HLH LDLRYHLSR+TG L+R IDRGSR INFILS+MVFNV PTILEISM
Sbjct: 261  TIRSVSRKVFSHLHELDLRYHLSRETGGLSRTIDRGSRAINFILSSMVFNVVPTILEISM 320

Query: 430  VSGILAYKFGASFAWITSLSVVAYAAFTLVVTQWRTKFRQAMNKADNDASSRAIDSLINY 251
            V+GILAYKFGA FAWITSLSV AY  FTL VTQWRTKFR+AMNKADNDAS++AIDSLINY
Sbjct: 321  VAGILAYKFGAPFAWITSLSVAAYVTFTLSVTQWRTKFRKAMNKADNDASTKAIDSLINY 380

Query: 250  ETVKYFNNEGYETEKYDEFLKKYEDASLKTQSSLAYLNFGQNVIFSTALSAAMVLCSHGI 71
            ETVKYFNNE YE ++YDE+LK+YED +LKT  SLA+LNFGQNVIFSTALS AMVLCSHGI
Sbjct: 381  ETVKYFNNEAYEADRYDEYLKRYEDTALKTSRSLAFLNFGQNVIFSTALSTAMVLCSHGI 440

Query: 70   MNGEMTVGDLVMVNGLLFQLSLP 2
            MNG+MTVGDLVMVNGLLFQLSLP
Sbjct: 441  MNGQMTVGDLVMVNGLLFQLSLP 463


>ref|XP_002319987.1| ABC transporter family of the mitochondria family [Populus
            trichocarpa] gi|222858363|gb|EEE95910.1| ABC transporter
            family of the mitochondria family [Populus trichocarpa]
          Length = 762

 Score =  526 bits (1356), Expect = e-147
 Identities = 273/383 (71%), Positives = 312/383 (81%), Gaps = 6/383 (1%)
 Frame = -3

Query: 1132 NRRGFYVNGFLSDYASSNGNKPYSEPG----GHALFSTSTG--NIAGTNHVAKRTDDKAV 971
            +RR   +N FLS+ ASS+   P+  P     GHALFST +   +  G  + A  +     
Sbjct: 83   HRRYLNLNAFLSNPASSSSTPPFRPPNSVLNGHALFSTMSAPKDKDGVANKAPPSSSATT 142

Query: 970  KKGNSEEQIADVKILKTLAKYLWSKDNFEFRFRVVLALSLLVTAKVLNVQVPFLFKHAVD 791
                S++Q+AD KIL+TLA YLW +DN EFR RVVLAL  LV AKVLNVQVPFLFK AVD
Sbjct: 143  ATNKSDQQVADTKILRTLASYLWMEDNPEFRLRVVLALGFLVGAKVLNVQVPFLFKLAVD 202

Query: 790  WLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVASR 611
            WL+ A+     LASF+TANST+LALF +PA+VL+GYGIAR G+SA NELR AVFSKVA R
Sbjct: 203  WLTTATSNAAALASFTTANSTLLALFATPASVLIGYGIARTGSSAFNELRTAVFSKVALR 262

Query: 610  TIRTVSRQVFAHLHNLDLRYHLSRQTGALNRIIDRGSRGINFILSAMVFNVAPTILEISM 431
            TIR+VSR+VF+HLH LDLRYHLSR+TG L+R IDRGSR INFILS+MVFNV PTILEISM
Sbjct: 263  TIRSVSRKVFSHLHELDLRYHLSRETGGLSRTIDRGSRAINFILSSMVFNVVPTILEISM 322

Query: 430  VSGILAYKFGASFAWITSLSVVAYAAFTLVVTQWRTKFRQAMNKADNDASSRAIDSLINY 251
            V+GILAYKFGA FAWITSLSV AY  FTL VTQWRTKFR+AMNKADNDAS++AIDSLINY
Sbjct: 323  VAGILAYKFGAPFAWITSLSVAAYVTFTLSVTQWRTKFRKAMNKADNDASTKAIDSLINY 382

Query: 250  ETVKYFNNEGYETEKYDEFLKKYEDASLKTQSSLAYLNFGQNVIFSTALSAAMVLCSHGI 71
            ETVKYFNNE YE ++YDE+LK+YED +LKT  SLA+LNFGQNVIFSTALS AMVLCSHGI
Sbjct: 383  ETVKYFNNEAYEADRYDEYLKRYEDTALKTSRSLAFLNFGQNVIFSTALSTAMVLCSHGI 442

Query: 70   MNGEMTVGDLVMVNGLLFQLSLP 2
            MNG+MTVGDLVMVNGLLFQLSLP
Sbjct: 443  MNGQMTVGDLVMVNGLLFQLSLP 465


>ref|XP_004139927.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
            [Cucumis sativus]
          Length = 762

 Score =  523 bits (1348), Expect = e-146
 Identities = 278/375 (74%), Positives = 311/375 (82%), Gaps = 4/375 (1%)
 Frame = -3

Query: 1114 VNGFLSDYASSNGNKPYSEPG----GHALFSTSTGNIAGTNHVAKRTDDKAVKKGNSEEQ 947
            V+ FLSD +SS+  K  S+ G    G   FSTS+ N           + K V KG SE Q
Sbjct: 92   VHAFLSDPSSSSSTKG-SQSGFMLNGRLPFSTSSANGTEAASSPSGKNIKPVNKG-SESQ 149

Query: 946  IADVKILKTLAKYLWSKDNFEFRFRVVLALSLLVTAKVLNVQVPFLFKHAVDWLSVASGA 767
            +AD KIL+TLA YLW KDN EFRFRV++AL  LV AK+LNVQVPFLFK AVDWL+ ASG 
Sbjct: 150  VADAKILRTLASYLWMKDNSEFRFRVIMALGFLVGAKILNVQVPFLFKLAVDWLTTASGN 209

Query: 766  GGQLASFSTANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVASRTIRTVSRQ 587
               LASF+ ANST+L LF +PAAVLVGYGIAR+GASA NELR AVFSKVA RTIR+VSR+
Sbjct: 210  AAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASAFNELRTAVFSKVALRTIRSVSRK 269

Query: 586  VFAHLHNLDLRYHLSRQTGALNRIIDRGSRGINFILSAMVFNVAPTILEISMVSGILAYK 407
            VF+HLH+LDL+YHLSR+TGAL+R IDRGSR INFILS+MVFNV PTILEISMVSGILAYK
Sbjct: 270  VFSHLHDLDLQYHLSRETGALSRTIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYK 329

Query: 406  FGASFAWITSLSVVAYAAFTLVVTQWRTKFRQAMNKADNDASSRAIDSLINYETVKYFNN 227
            FGA FA+ITSLSV+AY  FTL VTQWRTKFR+AMNKADNDA+++AIDSLINYETVKYFNN
Sbjct: 330  FGAPFAFITSLSVIAYVIFTLTVTQWRTKFRKAMNKADNDANTKAIDSLINYETVKYFNN 389

Query: 226  EGYETEKYDEFLKKYEDASLKTQSSLAYLNFGQNVIFSTALSAAMVLCSHGIMNGEMTVG 47
            E YE  KYDE+LKKYEDA+LKTQ SLA LNFGQNVIFSTALS AMVLCSHG+MNG MTVG
Sbjct: 390  EAYEANKYDEYLKKYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLCSHGVMNGNMTVG 449

Query: 46   DLVMVNGLLFQLSLP 2
            DLVMVNGLLFQLSLP
Sbjct: 450  DLVMVNGLLFQLSLP 464


>ref|XP_002864559.1| hypothetical protein ARALYDRAFT_495937 [Arabidopsis lyrata subsp.
            lyrata] gi|297310394|gb|EFH40818.1| hypothetical protein
            ARALYDRAFT_495937 [Arabidopsis lyrata subsp. lyrata]
          Length = 728

 Score =  520 bits (1339), Expect = e-145
 Identities = 270/378 (71%), Positives = 310/378 (82%), Gaps = 7/378 (1%)
 Frame = -3

Query: 1114 VNGFLSDYASSNGNKPY-------SEPGGHALFSTSTGNIAGTNHVAKRTDDKAVKKGNS 956
            +N FLSD++ S    P        S      LFSTST N    +  A ++ +  +   +S
Sbjct: 58   INAFLSDHSPSPSPSPSPIRFVQRSSVLNGRLFSTSTPN---PDQAATKSKEIKITSSDS 114

Query: 955  EEQIADVKILKTLAKYLWSKDNFEFRFRVVLALSLLVTAKVLNVQVPFLFKHAVDWLSVA 776
            +  +AD+KIL+TLA YLW +DN EFRFRV+ AL  LV AKVLNVQVPFLFK AVDWL+ A
Sbjct: 115  DSAMADMKILRTLAGYLWMRDNPEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLASA 174

Query: 775  SGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVASRTIRTV 596
            +G G  L +F+  N T+L +F +PAAVL+GYGIAR G+SA NELR AVFSKVA RTIR+V
Sbjct: 175  TGTGASLTTFAATNPTLLTVFATPAAVLIGYGIARTGSSAFNELRTAVFSKVALRTIRSV 234

Query: 595  SRQVFAHLHNLDLRYHLSRQTGALNRIIDRGSRGINFILSAMVFNVAPTILEISMVSGIL 416
            SR+VF+HLH+LDLRYHLSR+TGALNRIIDRGSR INFILSAMVFNV PTILEISMVSGIL
Sbjct: 235  SRKVFSHLHDLDLRYHLSRETGALNRIIDRGSRAINFILSAMVFNVVPTILEISMVSGIL 294

Query: 415  AYKFGASFAWITSLSVVAYAAFTLVVTQWRTKFRQAMNKADNDASSRAIDSLINYETVKY 236
            AYKFGA+FAWITSLSV +Y  FTL VTQWRTKFR+AMNKADNDAS+RAIDSLINYETVKY
Sbjct: 295  AYKFGAAFAWITSLSVGSYIVFTLAVTQWRTKFRKAMNKADNDASTRAIDSLINYETVKY 354

Query: 235  FNNEGYETEKYDEFLKKYEDASLKTQSSLAYLNFGQNVIFSTALSAAMVLCSHGIMNGEM 56
            FNNEGYE EKYD+FLKKYEDA+L+TQ SLA+LNFGQ++IFSTALS AMVLCS GIMNG+M
Sbjct: 355  FNNEGYEAEKYDQFLKKYEDAALQTQRSLAFLNFGQSIIFSTALSTAMVLCSQGIMNGQM 414

Query: 55   TVGDLVMVNGLLFQLSLP 2
            TVGDLVMVNGLLFQLSLP
Sbjct: 415  TVGDLVMVNGLLFQLSLP 432


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