BLASTX nr result
ID: Coptis23_contig00001145
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00001145
(2532 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283405.1| PREDICTED: uncharacterized protein LOC100250... 274 7e-71
emb|CAN82042.1| hypothetical protein VITISV_033523 [Vitis vinifera] 274 7e-71
ref|XP_004135079.1| PREDICTED: uncharacterized protein LOC101215... 263 2e-67
ref|XP_002317899.1| predicted protein [Populus trichocarpa] gi|2... 262 4e-67
ref|XP_002277225.2| PREDICTED: uncharacterized protein LOC100264... 259 2e-66
>ref|XP_002283405.1| PREDICTED: uncharacterized protein LOC100250808 [Vitis vinifera]
Length = 697
Score = 274 bits (701), Expect = 7e-71
Identities = 154/304 (50%), Positives = 188/304 (61%), Gaps = 14/304 (4%)
Frame = +3
Query: 150 HLNYPDSVESSPRSRNNDSWDEQTFSPAPGSKLRLMCSYGGHIVPRPHDKSLCYLGGDTR 329
H++YPDSV+SSPRSRN DSWD+ S PG+KLRLMCSYGGHI PRPHDKSLCY+GGDTR
Sbjct: 25 HMSYPDSVDSSPRSRNTDSWDDPLPS-VPGAKLRLMCSYGGHIFPRPHDKSLCYVGGDTR 83
Query: 330 IIVVDXXXXXXXXXXXXXXXXXXXXXFTVKYQLPNEDLDSLISVTTDEDLDNMIDEYDRT 509
I+V D FT+KYQLPNEDLDSLISVTTDEDL+NMIDEYDRT
Sbjct: 84 IVVADRNSSLADLSARLSKILLQGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRT 143
Query: 510 SSPSSIKPSRLRLFLFPTKPDSASSMGSLLDDS-KSESWFVEALNGSGVLPRGYSGGDGA 686
S++KPSRLRLFLFP KP+SASS+GS+LD+S KS+ WF+ LNG+ ++ RG+S
Sbjct: 144 ---SALKPSRLRLFLFPNKPESASSIGSILDNSTKSDDWFLNCLNGTNLMTRGFSDSASV 200
Query: 687 N-TXXXXXXXXXXXXXIVQTRNVENTQN---DPKVKISSNQDVHSVPDSPMLDXXXXXXX 854
N R++E +Q + QDVHSVPDSPML+
Sbjct: 201 NCLLSLDEDAVANNLDSSSARDLEASQPGGFGTCKTVKQGQDVHSVPDSPMLETSSSFGS 260
Query: 855 XXXXPCMVNLPPIRVHIED---------INQKAGFDEQFGSLTVGLGVAPISHGVVGIVS 1007
P + NLPPIRVH+ED +QK G +EQF ++V + G V + S
Sbjct: 261 TSSSPSLANLPPIRVHVEDGSGGGSVRLQDQKLGIEEQFAQMSVAM--QKQDEGFVVLSS 318
Query: 1008 PPVA 1019
P A
Sbjct: 319 PATA 322
Score = 128 bits (321), Expect = 9e-27
Identities = 115/372 (30%), Positives = 143/372 (38%), Gaps = 22/372 (5%)
Frame = +1
Query: 1159 QGVGTGFRKPPQPQ---------LVQKSSGGLDLHSPDGNSRDNSVPDGMMRAKQMYYGE 1311
QG+ G+RKPP PQ QKS GG+DL SPD S DNS+P+ + R K M Y E
Sbjct: 347 QGMPVGYRKPPPPQPQQQPLPPQSQQKSVGGIDLASPDSVSSDNSIPNAISRPKPMIYQE 406
Query: 1312 QMVQVQSRDNRNQEQKREMN----NQNYRVQMQQ--QDSSYGLTSNQLDXXXXXXXXXXX 1473
++Q+ S NR E N + N R+ MQQ QDS Y + + Q D
Sbjct: 407 PVIQIPSGTNRVSSNPVEQNINLFDPNSRIHMQQPVQDSGY-ILAPQFDQQQQQQQQQQH 465
Query: 1474 XXXXXXXXXXXXXXXXXXXXXXXXFYNAGTHYVQQQASGXXXXXXXXXXXXXXXXXXXXX 1653
F +AGTHY+ +G
Sbjct: 466 QQQQQHQQQQQQQPQPQPQ-----FIHAGTHYIHHHPTGPLQVPSFYPVYPSQQQHHHHH 520
Query: 1654 XXXXXXXXXXXNYPMYYVTVPQNYGYSMQXXXXXXXXXXXXXXXXXXXXXXXXXX----A 1821
YPMY+V Q YS+ A
Sbjct: 521 PHQLDP-----QYPMYFVPSRQAQAYSLSMQQSNFSEAATGIPSGRSQAPSAPAMVTSPA 575
Query: 1822 AYKEQASNVFPSRAAAPQKPELGASMYXXXXXXXXXXXXXXSG--SQYVSYSPHQMHHAS 1995
AY P+R A QKPE+ A MY S QYV YS Q+HH S
Sbjct: 576 AYN-------PTRNAPLQKPEMAAGMYRTGTAAAPLVQVPSSQHQQQYVGYS--QIHHPS 626
Query: 1996 QSIXXXXXXXX-YGYEYSDPSNPQIYYTQAHGTALPPQYQTMTPXXXXXXXXXXXQIPTD 2172
QSI Y YE+SDP++ QI+Y QA L PQYQTMT Q+ TD
Sbjct: 627 QSIAPPSAATANYAYEFSDPAHAQIFYAQAMAPTL-PQYQTMTSAPAVVVPEASAQLSTD 685
Query: 2173 NTKPQLRTPQSI 2208
N K Q+RT Q +
Sbjct: 686 NIKQQIRTSQPL 697
>emb|CAN82042.1| hypothetical protein VITISV_033523 [Vitis vinifera]
Length = 549
Score = 274 bits (701), Expect = 7e-71
Identities = 154/304 (50%), Positives = 188/304 (61%), Gaps = 14/304 (4%)
Frame = +3
Query: 150 HLNYPDSVESSPRSRNNDSWDEQTFSPAPGSKLRLMCSYGGHIVPRPHDKSLCYLGGDTR 329
H++YPDSV+SSPRSRN DSWD+ S PG+KLRLMCSYGGHI PRPHDKSLCY+GGDTR
Sbjct: 25 HMSYPDSVDSSPRSRNTDSWDDPLPS-VPGAKLRLMCSYGGHIFPRPHDKSLCYVGGDTR 83
Query: 330 IIVVDXXXXXXXXXXXXXXXXXXXXXFTVKYQLPNEDLDSLISVTTDEDLDNMIDEYDRT 509
I+V D FT+KYQLPNEDLDSLISVTTDEDL+NMIDEYDRT
Sbjct: 84 IVVADRNSSLADLSARLSKILLQGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRT 143
Query: 510 SSPSSIKPSRLRLFLFPTKPDSASSMGSLLDDS-KSESWFVEALNGSGVLPRGYSGGDGA 686
S++KPSRLRLFLFP KP+SASS+GS+LD+S KS+ WF+ LNG+ ++ RG+S
Sbjct: 144 ---SALKPSRLRLFLFPNKPESASSIGSILDNSTKSDDWFLNCLNGTNLMTRGFSDSASV 200
Query: 687 N-TXXXXXXXXXXXXXIVQTRNVENTQN---DPKVKISSNQDVHSVPDSPMLDXXXXXXX 854
N R++E +Q + QDVHSVPDSPML+
Sbjct: 201 NCLLSLDEDAVANNLDSSSARDLEASQPGGFGTCKTVKQGQDVHSVPDSPMLETSSSFGS 260
Query: 855 XXXXPCMVNLPPIRVHIED---------INQKAGFDEQFGSLTVGLGVAPISHGVVGIVS 1007
P + NLPPIRVH+ED +QK G +EQF ++V + G V + S
Sbjct: 261 TSSSPSLANLPPIRVHVEDGSGGGSVRLQDQKLGIEEQFAQMSVAM--QKQDEGFVVLSS 318
Query: 1008 PPVA 1019
P A
Sbjct: 319 PATA 322
Score = 77.8 bits (190), Expect = 1e-11
Identities = 51/122 (41%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +1
Query: 1852 PSRAAAPQKPELGASMYXXXXXXXXXXXXXXSG--SQYVSYSPHQMHHASQSIXXXXXXX 2025
P+R A QKPE+ A MY S QYV YS Q+HH SQSI
Sbjct: 431 PTRNAPLQKPEMAAGMYRTGTAAAPLVQVPSSQHQQQYVGYS--QIHHPSQSIAPPSAGT 488
Query: 2026 X-YGYEYSDPSNPQIYYTQAHGTALPPQYQTMTPXXXXXXXXXXXQIPTDNTKPQLRTPQ 2202
Y YE+SDP++ QI+Y QA L PQYQTMT Q+ TDN K Q+RT Q
Sbjct: 489 ANYAYEFSDPAHAQIFYAQAMAPTL-PQYQTMTSAPAVVVPEASAQLSTDNIKQQIRTSQ 547
Query: 2203 SI 2208
+
Sbjct: 548 PL 549
>ref|XP_004135079.1| PREDICTED: uncharacterized protein LOC101215574 [Cucumis sativus]
gi|449526583|ref|XP_004170293.1| PREDICTED:
uncharacterized LOC101215574 [Cucumis sativus]
Length = 708
Score = 263 bits (672), Expect = 2e-67
Identities = 146/291 (50%), Positives = 178/291 (61%), Gaps = 20/291 (6%)
Frame = +3
Query: 150 HLNYPDSVESSPRSRNNDSWDEQTFSPAP-GSKLRLMCSYGGHIVPRPHDKSLCYLGGDT 326
HLNYP+S++SSPRSRN D+WDE +P P S+LRLMCSYGGHIVPRPHDK+LCY+ G+T
Sbjct: 20 HLNYPESLDSSPRSRNTDTWDEP-LAPGPLASRLRLMCSYGGHIVPRPHDKTLCYVCGET 78
Query: 327 RIIVVDXXXXXXXXXXXXXXXXXXXXXFTVKYQLPNEDLDSLISVTTDEDLDNMIDEYDR 506
RI+VVD FT+KYQLPNEDLDSLISVTTDEDL+NMIDEYDR
Sbjct: 79 RIVVVDRHTSLSDLTARLSKTLLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDR 138
Query: 507 TSSPSS---IKPSRLRLFLFPTKPDSASSMGSLLDDS-KSESWFVEALNGSGVLPRGYSG 674
T+S SS KPSRLRLFLFP KPD + S+G +L+ S S+ WF+ ALNG+G+L RG+S
Sbjct: 139 TASNSSNPAAKPSRLRLFLFPIKPDVSQSIGPILESSTSSDDWFLNALNGAGLLNRGFSD 198
Query: 675 GDGANTXXXXXXXXXXXXXIVQTRNVENTQNDPKVK-ISSNQDVHSVPDSPMLDXXXXXX 851
N R + +Q QDVHSVPDSPM++
Sbjct: 199 SASVNCLLGLDDDVGVNNLDSGPREADGSQPGSFGNGKGGKQDVHSVPDSPMIETTSSFG 258
Query: 852 XXXXXPCMVNLPPIRVHIEDI--------------NQKAGFDEQFGSLTVG 962
P + NLPPIRVH+ED +QK G +EQF ++VG
Sbjct: 259 STSSSPSLANLPPIRVHVEDSGNNGGVGAGVVRVQDQKVGIEEQFSQMSVG 309
Score = 94.4 bits (233), Expect = 1e-16
Identities = 106/379 (27%), Positives = 134/379 (35%), Gaps = 30/379 (7%)
Frame = +1
Query: 1162 GVGTGFRKP----PQ---PQLVQKSSGGLDLHSPDGNSRDNSVPDGMMRAKQMYYGEQMV 1320
G G+RKP PQ PQL QKSSG +D+ SPD S D+S+ + M R+K + Y EQ+V
Sbjct: 366 GAPVGYRKPLPPQPQSLPPQLQQKSSGLVDIPSPDSVSSDSSLNNPMSRSKPVMYQEQVV 425
Query: 1321 -QVQSRDNR----NQEQKREMNNQNYRVQMQQQDSSYG-LTSNQLDXXXXXXXXXXXXXX 1482
Q+ S R + K +QN RV +QQQ G + +Q D
Sbjct: 426 HQIPSSAVRLPGSPADPKVNFPDQNARVHIQQQVQEPGYVLHSQYDQHQHQQLQQQQPQQ 485
Query: 1483 XXXXXXXXXXXXXXXXXXXXXFYNAGTHYVQQQASGXXXXXXXXXXXXXXXXXXXXXXXX 1662
F +AG HY+ Q SG
Sbjct: 486 QQPQQHPPQPQQ---------FIHAGAHYIHQHPSGAVQIPAFFPVYSPQHHHHPHQIEQ 536
Query: 1663 XXXXXXXXNYPMYYVTVPQNYGYS----MQXXXXXXXXXXXXXXXXXXXXXXXXXXAAYK 1830
YP+YY+ Q Y Q AAY
Sbjct: 537 --------QYPVYYLPARQGQAYGNLPVQQSTISESATAIPPGRPQTPPNPTLVTTAAYN 588
Query: 1831 ----------EQASNVFPSRAAAPQKPELGASMYXXXXXXXXXXXXXXSGSQYVSYSPHQ 1980
E A+N F PQ QYV Y+
Sbjct: 589 HMRNPPIAKTEMAANAFKQTTTTPQS--------------LVQVPTTQHQQQYVGYNQGY 634
Query: 1981 MH--HASQSIXXXXXXXXYGYEYSDPSNPQIYYTQAHGTALPP-QYQTMTPXXXXXXXXX 2151
H H SQS+ Y YE+SDP++ QIYYTQ LPP QYQ M P
Sbjct: 635 SHIQHPSQSVTPTSATANYAYEFSDPAHSQIYYTQ----PLPPSQYQAM-PAAAVMLPEN 689
Query: 2152 XXQIPTDNTKPQLRTPQSI 2208
Q+PTDN K Q+RT Q +
Sbjct: 690 SAQLPTDNIKQQMRTSQPL 708
>ref|XP_002317899.1| predicted protein [Populus trichocarpa] gi|222858572|gb|EEE96119.1|
predicted protein [Populus trichocarpa]
Length = 648
Score = 262 bits (669), Expect = 4e-67
Identities = 144/293 (49%), Positives = 184/293 (62%), Gaps = 2/293 (0%)
Frame = +3
Query: 141 TPTHLNYPDSVESSPRSRNNDSWDEQTFSPAPGSKLRLMCSYGGHIVPRPHDKSLCYLGG 320
T HLNYPDSVESSPRS DS +T P PG+KLRLMCSYGGHI+PRPHDK+LCY+GG
Sbjct: 19 TTVHLNYPDSVESSPRSHPPDSTFNETLPPVPGAKLRLMCSYGGHIIPRPHDKTLCYVGG 78
Query: 321 DTRIIVVDXXXXXXXXXXXXXXXXXXXXXFTVKYQLPNEDLDSLISVTTDEDLDNMIDEY 500
+TR++ +D FT+KYQLP+EDLDSL+SVTTDEDLDNMI+EY
Sbjct: 79 ETRMVAIDRHSSLPILSSRLSRTLLNGRPFTLKYQLPHEDLDSLVSVTTDEDLDNMIEEY 138
Query: 501 DR-TSSPSSIKPSRLRLFLFPTKPDSASSMGSLLDDSKSESWFVEALNGSGVLPRGYSGG 677
DR +S S++ PSR+RLF+F +KP++A+SMGSLLDD+KSE+WFV+ALNGSG++PR S
Sbjct: 139 DRINASSSALSPSRIRLFIFFSKPETAASMGSLLDDAKSETWFVDALNGSGLIPRNLS-- 196
Query: 678 DGANTXXXXXXXXXXXXXIVQTRNVENTQNDPKVKISSNQDVH-SVPDSPMLDXXXXXXX 854
D A T Q VE + K K +VH ++ DSP+++
Sbjct: 197 DSA-TLECLVTLDNDQDLEAQAEGVEG--ENKKAKNELLHEVHTTLSDSPVVEKNSSFGS 253
Query: 855 XXXXPCMVNLPPIRVHIEDINQKAGFDEQFGSLTVGLGVAPISHGVVGIVSPP 1013
P M NLPPIRV +ED + G +EQF +T V G + +PP
Sbjct: 254 SSSSPSMTNLPPIRVRVED--PRVGVEEQFAQMTYAQVVQKHDDGYGLLSAPP 304
>ref|XP_002277225.2| PREDICTED: uncharacterized protein LOC100264517 [Vitis vinifera]
Length = 674
Score = 259 bits (663), Expect = 2e-66
Identities = 143/299 (47%), Positives = 186/299 (62%), Gaps = 8/299 (2%)
Frame = +3
Query: 141 TPTHLNYPDSVESSPRSRNNDSWDEQTFSPAPGSKLRLMCSYGGHIVPRPHDKSLCYLGG 320
T LNYP+S +SSPR D+W+E P PG++LRLMCS+GGHI+PRPHDK+LCY+GG
Sbjct: 14 TTMQLNYPESADSSPRKA--DTWEEP-LPPVPGARLRLMCSFGGHIIPRPHDKTLCYMGG 70
Query: 321 DTRIIVVDXXXXXXXXXXXXXXXXXXXXXFTVKYQLPNEDLDSLISVTTDEDLDNMIDEY 500
+TR+IVVD FT+KYQLPNEDLD+LISVTT+EDLDNMI+EY
Sbjct: 71 ETRMIVVDRSSSLADLSSRISRTLLNGRGFTLKYQLPNEDLDNLISVTTNEDLDNMIEEY 130
Query: 501 DRTSSPSSIKPSRLRLFLFPTKPDSASSMGSLLDDSKSESWFVEALNGSGVLPRGYSGGD 680
DR +S S +K SRLRLF+F KP++A+SMGSLLDD+KSE+WFV+ALNG+G+LPRG S
Sbjct: 131 DRITSASPLKSSRLRLFIFLAKPETAASMGSLLDDAKSETWFVDALNGAGLLPRGLSDSA 190
Query: 681 GANTXXXXXXXXXXXXXI-VQTRNVENTQNDPKVKISSNQDVHSVPDSPMLDXXXXXXXX 857
+ + QT ++ NT++ S Q+VHSVP SPM++
Sbjct: 191 AIDCFLDRDASGDSCTHVEAQTDSLCNTKHG-----KSGQEVHSVPSSPMVETASSFGSS 245
Query: 858 XXXPCMVNLPPIRVHIED-----INQKAGFDEQFGSLTVG--LGVAPISHGVVGIVSPP 1013
P M NLPPIRV ED + K G +E+F ++ V G V + +PP
Sbjct: 246 SSSPSMANLPPIRVRAEDGGLRLHDHKVGLEEEFAYMSTNPQTVVQKQDEGFVVLSAPP 304
Score = 70.1 bits (170), Expect = 3e-09
Identities = 43/117 (36%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Frame = +1
Query: 1870 PQKPELGASMYXXXXXXXXXXXXXXSGS-----QYVSYSPHQMHHASQSIXXXXXXXXYG 2034
P KPE+ AS+Y S QYV +S Q+HH QSI Y
Sbjct: 559 PTKPEMAASVYRTVGTATPPLVQVPSNQFHQQQQYVGFS--QLHHPPQSIAAAAPN--YA 614
Query: 2035 YEYSDPSNPQIYYTQAHGTALPPQYQTMTPXXXXXXXXXXXQIPTDNTKPQLRTPQS 2205
+EY+ P+ Q YYT LPPQYQT+T Q+P DNT Q+RT Q+
Sbjct: 615 FEYAHPAQDQAYYTHHSVAPLPPQYQTLTSTAAVALSEASAQLPIDNTMQQIRTSQN 671