BLASTX nr result

ID: Coptis23_contig00001137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001137
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16318.3| unnamed protein product [Vitis vinifera]              671   0.0  
ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein R...   671   0.0  
ref|XP_002529946.1| DNA binding protein, putative [Ricinus commu...   671   0.0  
ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein R...   671   0.0  
ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein R...   669   0.0  

>emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 327/409 (79%), Positives = 363/409 (88%)
 Frame = +1

Query: 280  GMKPGPDSVGIVAISHSRSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVLTVFP 459
            GMKPGPDSVGI AISHS SGVAARACGLVSLEP+KIAEILKDRPSWFRDCRSLEV T+FP
Sbjct: 189  GMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFP 248

Query: 460  AGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTTLEDGSLVVCERSLSGGVTGPNASAAP 639
            AGNGG +EL+Y Q+YAPTTLAPARDFWTLRYTT+L++GSLVVCERSLSG   GPN +AA 
Sbjct: 249  AGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAA 308

Query: 640  QFVRAEILPSGYLIRSCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVVAQKMTIAAL 819
            QFVRAE+LPSGYLIR CEGGGSIIHIVDHL+LEAWSVPEVLRPLY+SS+VVAQKMTIAAL
Sbjct: 309  QFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAAL 368

Query: 820  RHIRQIAQEMSGEVVYGLGRQPAVLRNFSQKLSRGFNDAVSGFNDDGWSLMNCDGSDDFM 999
            R+IRQIAQE SGEVVYGLGRQPAVLR FSQ+LSRGFNDA++GFNDDGWSLM+CDG++D +
Sbjct: 369  RYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVI 428

Query: 1000 IAINSGKNIGVNPNAASPLPLPGSVLCVKASMLLQNVHPALLIRFLREHRSEWADYNVDA 1179
            IA+NS KN+    N A+ L LPG VLC KASMLLQNV PA+L+RFLREHRSEWAD++VDA
Sbjct: 429  IAVNSTKNLNTTSNPANSLSLPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDA 488

Query: 1180 YSAASLKAGSYAFGGFKSTRFSGSQVIMPLGHTVXXXXXXXXXXXXGHALTQEDALLSRD 1359
            YSAASLKA  Y++ G + TRF+GSQ+IMPLGHT+            GH+L  EDA +SRD
Sbjct: 489  YSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAHEDAFMSRD 548

Query: 1360 IHLLQTCSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 1506
            IHLLQ CSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK
Sbjct: 549  IHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 597



 Score =  112 bits (281), Expect(2) = 0.0
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DTSCESVVTTPQHSLRDATNPAGLLSVAEETLAEFLSKATGTAVNWVQMPGMKPGPD 173
           D SCESVVTTPQHSLRDA NPAGLLS+AEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 139 DASCESVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 195


>ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis vinifera]
          Length = 843

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 327/409 (79%), Positives = 363/409 (88%)
 Frame = +1

Query: 280  GMKPGPDSVGIVAISHSRSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVLTVFP 459
            GMKPGPDSVGI AISHS SGVAARACGLVSLEP+KIAEILKDRPSWFRDCRSLEV T+FP
Sbjct: 188  GMKPGPDSVGIFAISHSCSGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFP 247

Query: 460  AGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTTLEDGSLVVCERSLSGGVTGPNASAAP 639
            AGNGG +EL+Y Q+YAPTTLAPARDFWTLRYTT+L++GSLVVCERSLSG   GPN +AA 
Sbjct: 248  AGNGGTVELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAA 307

Query: 640  QFVRAEILPSGYLIRSCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVVAQKMTIAAL 819
            QFVRAE+LPSGYLIR CEGGGSIIHIVDHL+LEAWSVPEVLRPLY+SS+VVAQKMTIAAL
Sbjct: 308  QFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAAL 367

Query: 820  RHIRQIAQEMSGEVVYGLGRQPAVLRNFSQKLSRGFNDAVSGFNDDGWSLMNCDGSDDFM 999
            R+IRQIAQE SGEVVYGLGRQPAVLR FSQ+LSRGFNDA++GFNDDGWSLM+CDG++D +
Sbjct: 368  RYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVI 427

Query: 1000 IAINSGKNIGVNPNAASPLPLPGSVLCVKASMLLQNVHPALLIRFLREHRSEWADYNVDA 1179
            IA+NS KN+    N A+ L LPG VLC KASMLLQNV PA+L+RFLREHRSEWAD++VDA
Sbjct: 428  IAVNSTKNLNTTSNPANSLSLPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDA 487

Query: 1180 YSAASLKAGSYAFGGFKSTRFSGSQVIMPLGHTVXXXXXXXXXXXXGHALTQEDALLSRD 1359
            YSAASLKA  Y++ G + TRF+GSQ+IMPLGHT+            GH+L  EDA +SRD
Sbjct: 488  YSAASLKASPYSYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAHEDAFMSRD 547

Query: 1360 IHLLQTCSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 1506
            IHLLQ CSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK
Sbjct: 548  IHLLQICSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 596



 Score =  112 bits (281), Expect(2) = 0.0
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DTSCESVVTTPQHSLRDATNPAGLLSVAEETLAEFLSKATGTAVNWVQMPGMKPGPD 173
           D SCESVVTTPQHSLRDA NPAGLLS+AEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 138 DASCESVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 194


>ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
            gi|223530576|gb|EEF32454.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 842

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 329/409 (80%), Positives = 362/409 (88%)
 Frame = +1

Query: 280  GMKPGPDSVGIVAISHSRSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVLTVFP 459
            GMKPGPDSVGI AIS S SGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV T+FP
Sbjct: 187  GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 246

Query: 460  AGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTTLEDGSLVVCERSLSGGVTGPNASAAP 639
            AGNGG IEL+Y Q+YAPTTLAPARDFWTLRYT++L++GSLVVCERSLSG   GPNA+AA 
Sbjct: 247  AGNGGTIELVYSQVYAPTTLAPARDFWTLRYTSSLDNGSLVVCERSLSGSGAGPNAAAAA 306

Query: 640  QFVRAEILPSGYLIRSCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVVAQKMTIAAL 819
            QFVRAE+LPSGYLIR C+GGGSIIHIVDHL+LEAWSVPEVLRPLY+SSKVVAQKMTIAAL
Sbjct: 307  QFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAAL 366

Query: 820  RHIRQIAQEMSGEVVYGLGRQPAVLRNFSQKLSRGFNDAVSGFNDDGWSLMNCDGSDDFM 999
            R IRQIAQE SGEVVYGLGRQPAVLR FSQ+LSRGFNDA++GFNDDGWSLM+CDG++D +
Sbjct: 367  RFIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNDDGWSLMSCDGAEDVI 426

Query: 1000 IAINSGKNIGVNPNAASPLPLPGSVLCVKASMLLQNVHPALLIRFLREHRSEWADYNVDA 1179
            + INS KN+    NAA+     G +LC KASMLLQNV PA+L+RFLREHRSEWAD+NVDA
Sbjct: 427  VTINSTKNLSSTSNAANSFAFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDA 486

Query: 1180 YSAASLKAGSYAFGGFKSTRFSGSQVIMPLGHTVXXXXXXXXXXXXGHALTQEDALLSRD 1359
            YSAASLKAGSYAF G + TRF+GSQ+IMPLGHT+            GH+L QEDA +SRD
Sbjct: 487  YSAASLKAGSYAFPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLVQEDAFVSRD 546

Query: 1360 IHLLQTCSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 1506
            IHLLQ CSG+DENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK
Sbjct: 547  IHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 595



 Score =  111 bits (278), Expect(2) = 0.0
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DTSCESVVTTPQHSLRDATNPAGLLSVAEETLAEFLSKATGTAVNWVQMPGMKPGPD 173
           D SC+SVVTTPQHSLRDA NPAGLLS+AEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 137 DASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 193


>ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
            max]
          Length = 842

 Score =  671 bits (1732), Expect(2) = 0.0
 Identities = 330/409 (80%), Positives = 362/409 (88%)
 Frame = +1

Query: 280  GMKPGPDSVGIVAISHSRSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVLTVFP 459
            GMKPGPDSVGI AIS S SGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV T+FP
Sbjct: 188  GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 247

Query: 460  AGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTTLEDGSLVVCERSLSGGVTGPNASAAP 639
            AGNGG IEL+Y Q YAPTTLAPARDFWTLRYTT+LE+GSLVVCERSLSG  TGPN +AA 
Sbjct: 248  AGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAA 307

Query: 640  QFVRAEILPSGYLIRSCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVVAQKMTIAAL 819
            QFVRAE LPSGYLIR CEGGGSIIHIVDHL+LEAWSVPEVLRPLY+SSKVVAQKMTIAAL
Sbjct: 308  QFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAAL 367

Query: 820  RHIRQIAQEMSGEVVYGLGRQPAVLRNFSQKLSRGFNDAVSGFNDDGWSLMNCDGSDDFM 999
            R+IRQIAQE SGEVVYGLGRQPAVLR FSQ+LSRGFNDAV+GFNDDGW+++NCDG++D +
Sbjct: 368  RYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVI 427

Query: 1000 IAINSGKNIGVNPNAASPLPLPGSVLCVKASMLLQNVHPALLIRFLREHRSEWADYNVDA 1179
            IA+NS KN+    N AS L   G +LC KASMLLQNV PA+L+RFLREHRSEWAD+NVDA
Sbjct: 428  IAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDA 487

Query: 1180 YSAASLKAGSYAFGGFKSTRFSGSQVIMPLGHTVXXXXXXXXXXXXGHALTQEDALLSRD 1359
            YSAASLKAG+YA+ G + TRF+GSQ+IMPLGHT+            GH+L QEDA +SRD
Sbjct: 488  YSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRD 547

Query: 1360 IHLLQTCSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 1506
            IHLLQ CSG+DENAVGACSELVFAPIDEMFPDDAPL+PSGFRIIPLDSK
Sbjct: 548  IHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLVPSGFRIIPLDSK 596



 Score =  109 bits (272), Expect(2) = 0.0
 Identities = 50/57 (87%), Positives = 55/57 (96%)
 Frame = +3

Query: 3   DTSCESVVTTPQHSLRDATNPAGLLSVAEETLAEFLSKATGTAVNWVQMPGMKPGPD 173
           D SC+SVVTTPQH+LRDA+NPAGLLS+AEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 138 DASCDSVVTTPQHTLRDASNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194


>ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
            [Glycine max]
          Length = 845

 Score =  669 bits (1727), Expect(2) = 0.0
 Identities = 329/409 (80%), Positives = 361/409 (88%)
 Frame = +1

Query: 280  GMKPGPDSVGIVAISHSRSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVLTVFP 459
            GMKPGPDSVGI AIS S SGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEV T+FP
Sbjct: 188  GMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFP 247

Query: 460  AGNGGIIELIYMQMYAPTTLAPARDFWTLRYTTTLEDGSLVVCERSLSGGVTGPNASAAP 639
            AGNGG IEL+Y Q YAPTTLAPARDFWTLRYTT+LE+GSLVVCERSLSG  TGPN +AA 
Sbjct: 248  AGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAA 307

Query: 640  QFVRAEILPSGYLIRSCEGGGSIIHIVDHLDLEAWSVPEVLRPLYQSSKVVAQKMTIAAL 819
            QFVRAE LPSGYLIR CEGGGSIIHIVDHL+LEAWSVPEVLRPLY+SSKVVAQKMTIAAL
Sbjct: 308  QFVRAETLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAAL 367

Query: 820  RHIRQIAQEMSGEVVYGLGRQPAVLRNFSQKLSRGFNDAVSGFNDDGWSLMNCDGSDDFM 999
            R+IRQIAQE SGEVVYGLGRQPAVLR FSQ+LSRGFNDAV+GFNDDGW+++NCDG++D  
Sbjct: 368  RYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVF 427

Query: 1000 IAINSGKNIGVNPNAASPLPLPGSVLCVKASMLLQNVHPALLIRFLREHRSEWADYNVDA 1179
            IA+NS KN+    N AS L   G +LC KASMLLQNV PA+L+RFLREHRSEWAD++VDA
Sbjct: 428  IAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFSVDA 487

Query: 1180 YSAASLKAGSYAFGGFKSTRFSGSQVIMPLGHTVXXXXXXXXXXXXGHALTQEDALLSRD 1359
            YSAASLKAG+YA+ G + TRF+GSQ+IMPLGHT+            GH+L QEDA +SRD
Sbjct: 488  YSAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRD 547

Query: 1360 IHLLQTCSGVDENAVGACSELVFAPIDEMFPDDAPLLPSGFRIIPLDSK 1506
            IHLLQ CSG+DENAVGACSELVFAPIDEMFPDDAPL+PSGFRIIPLDSK
Sbjct: 548  IHLLQICSGIDENAVGACSELVFAPIDEMFPDDAPLIPSGFRIIPLDSK 596



 Score =  108 bits (269), Expect(2) = 0.0
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = +3

Query: 3   DTSCESVVTTPQHSLRDATNPAGLLSVAEETLAEFLSKATGTAVNWVQMPGMKPGPD 173
           D SC+SVVTTPQH++RDA NPAGLLS+AEETL EFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 138 DASCDSVVTTPQHTMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPD 194


Top