BLASTX nr result

ID: Coptis23_contig00001132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001132
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238525.1| uncharacterized protein LOC100306161 [Glycin...   120   7e-25
gb|ACU18451.1| unknown [Glycine max]                                  112   2e-22
gb|AFK33585.1| unknown [Medicago truncatula] gi|388495224|gb|AFK...   112   2e-22
ref|XP_003600619.1| hypothetical protein MTR_3g064350 [Medicago ...   112   2e-22
emb|CBI27985.3| unnamed protein product [Vitis vinifera]              108   2e-21

>ref|NP_001238525.1| uncharacterized protein LOC100306161 [Glycine max]
           gi|255627733|gb|ACU14211.1| unknown [Glycine max]
          Length = 194

 Score =  120 bits (301), Expect = 7e-25
 Identities = 72/129 (55%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
 Frame = -3

Query: 626 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKACKSYGG 447
           PL +M SL QQLP KRGLSK YQGKSQSFTSL+NVRSLEDLAK +NP  K++K+CKSY G
Sbjct: 71  PLGDMTSLFQQLPIKRGLSKFYQGKSQSFTSLTNVRSLEDLAKPENPYNKRLKSCKSYAG 130

Query: 446 GLSE--TTNKVSHPXXXXXXXXXXXSARGSWSSL-AAKRNNSCLGNRPPVPPQRTCS--T 282
           GL+E  +T  VS             S+RGS SS        + +G+RPP+PP R+ S  T
Sbjct: 131 GLAESHSTRAVS-----KRGMVHSTSSRGSCSSFRRGSATTNFMGSRPPIPPHRSTSTNT 185

Query: 281 LFNQTPLFA 255
           + NQT LFA
Sbjct: 186 IPNQTVLFA 194


>gb|ACU18451.1| unknown [Glycine max]
          Length = 163

 Score =  112 bits (280), Expect = 2e-22
 Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
 Frame = -3

Query: 626 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKACKSYGG 447
           PL +M+SL QQLP KRGLSK+Y+GK+QSFTS++ V SLEDL K +NP  KK+K C SYGG
Sbjct: 55  PLSDMSSLFQQLPIKRGLSKYYEGKAQSFTSIAKVNSLEDLVKPENPYNKKLKTCSSYGG 114

Query: 446 GLSETTNKVSHPXXXXXXXXXXXSARGSWSSLAAKR-NNSCLGNRPPVPPQR--TCSTLF 276
            + ET+                   RGS SSL+A R   + +  RPP+PP R  T S++ 
Sbjct: 115 VMGETSQ------------------RGSCSSLSANRGTENFMDRRPPIPPHRSTTTSSIP 156

Query: 275 NQTPLF 258
           NQT LF
Sbjct: 157 NQTALF 162


>gb|AFK33585.1| unknown [Medicago truncatula] gi|388495224|gb|AFK35678.1| unknown
           [Medicago truncatula]
          Length = 205

 Score =  112 bits (279), Expect = 2e-22
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
 Frame = -3

Query: 626 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKACKSYGG 447
           PL +M+SL QQLP KRGLSK YQGKSQSFTSL+NV+SLEDLAK ++P  K++K+C+SYGG
Sbjct: 75  PLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVKSLEDLAKPESPYNKRLKSCRSYGG 134

Query: 446 GL-SETTNKVSHPXXXXXXXXXXXSARGSWSSLAAKR--NNSCLGNRPPVPPQRTCST-- 282
              S+ ++  S             S+RGS SSL A++   ++ +G+RPP+ P    ST  
Sbjct: 135 FYESQESSFKSMSRLVSKRGVNSASSRGSCSSLNARKGSGSNFMGSRPPIHPHNRSSTST 194

Query: 281 --LFNQTPLFA 255
             + NQT LFA
Sbjct: 195 NNISNQTALFA 205


>ref|XP_003600619.1| hypothetical protein MTR_3g064350 [Medicago truncatula]
           gi|355489667|gb|AES70870.1| hypothetical protein
           MTR_3g064350 [Medicago truncatula]
          Length = 201

 Score =  112 bits (279), Expect = 2e-22
 Identities = 66/131 (50%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
 Frame = -3

Query: 626 PLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMKACKSYGG 447
           PL +M+SL QQLP KRGLSK YQGKSQSFTSL+NV+SLEDLAK ++P  K++K+C+SYGG
Sbjct: 71  PLSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVKSLEDLAKPESPYNKRLKSCRSYGG 130

Query: 446 GL-SETTNKVSHPXXXXXXXXXXXSARGSWSSLAAKR--NNSCLGNRPPVPPQRTCST-- 282
              S+ ++  S             S+RGS SSL A++   ++ +G+RPP+ P    ST  
Sbjct: 131 FYESQESSFKSMSRLVSKRGVNSASSRGSCSSLNARKGSGSNFMGSRPPIHPHNRSSTST 190

Query: 281 --LFNQTPLFA 255
             + NQT LFA
Sbjct: 191 NNISNQTALFA 201


>emb|CBI27985.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  108 bits (271), Expect = 2e-21
 Identities = 60/118 (50%), Positives = 74/118 (62%)
 Frame = -3

Query: 647 TNNTKGGPLYEMASLMQQLPFKRGLSKHYQGKSQSFTSLSNVRSLEDLAKLDNPCKKKMK 468
           T+    GPLYE++ LM QLP KRGLSK++QGKSQSFTSL++V+SLEDLAK   P +KKMK
Sbjct: 41  TSPLSNGPLYELSELMAQLPIKRGLSKYFQGKSQSFTSLASVKSLEDLAKKGTPSRKKMK 100

Query: 467 ACKSYGGGLSETTNKVSHPXXXXXXXXXXXSARGSWSSLAAKRNNSCLGNRPPVPPQR 294
           +CKSYGGGL        H            ++RGS  S   +R     G RPP P Q+
Sbjct: 101 SCKSYGGGLD------VHKLYTPKATISKKASRGSLLSSLGRRGVIMGGCRPPSPLQK 152


Top