BLASTX nr result

ID: Coptis23_contig00001129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001129
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610873.1| Diphthamide biosynthesis protein [Medicago t...   562   e-158
ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein ...   558   e-156
ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein ...   557   e-156
ref|XP_002265458.1| PREDICTED: diphthamide biosynthesis protein ...   557   e-156
ref|XP_002325444.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156

>ref|XP_003610873.1| Diphthamide biosynthesis protein [Medicago truncatula]
            gi|355512208|gb|AES93831.1| Diphthamide biosynthesis
            protein [Medicago truncatula]
          Length = 575

 Score =  562 bits (1449), Expect = e-158
 Identities = 276/430 (64%), Positives = 327/430 (76%), Gaps = 4/430 (0%)
 Frame = -2

Query: 1431 FIKNQIPDSITNDPALNASLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 1252
            FIKNQIPDSI NDP LNA++S+LPSNYSFEVHKC+WR+ ++ AKR+ALQFPEGLLMYSL+
Sbjct: 27   FIKNQIPDSILNDPLLNAAISILPSNYSFEVHKCVWRVRSTAAKRIALQFPEGLLMYSLI 86

Query: 1251 LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 1072
            LSDIFTT+  +  C+VLGDVTYGACC+DDFSA ALGA++LIHYGHSCL+PIDSTKIP LY
Sbjct: 87   LSDIFTTFAGVTHCYVLGDVTYGACCIDDFSAIALGAEILIHYGHSCLVPIDSTKIPCLY 146

Query: 1071 VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 892
            VFV+IKIDV+ L+DTV+LN  +     K++ LAGTIQF+S IRA KP LE  GF VLVPQ
Sbjct: 147  VFVDIKIDVDHLVDTVKLNSKDLGFMGKRVILAGTIQFASGIRAVKPELEKLGFRVLVPQ 206

Query: 891  SKPLSAGEVLGCTSPTIPKGSAD----VLIFVADGRFHLEAFMIANPGIKAFRYDPYLGV 724
            SKPLSAGE+LGCT+P + K   D    VL+FV+DGRFHLEAFMIANPG+KAFRYDPY+G 
Sbjct: 207  SKPLSAGEILGCTAPKVGKELDDKEESVLVFVSDGRFHLEAFMIANPGVKAFRYDPYVGK 266

Query: 723  LFLEEYDHDGMKKVRKNAIIKAREASCWGIILGTLGRQGNPRILKRLQSKMKERGFTWTT 544
            LFLEEYDH GMK  RKNAI+KA+EA  WG++LGTLGRQGNP+IL+RL+ KM ++GF +T 
Sbjct: 267  LFLEEYDHVGMKGSRKNAILKAKEARNWGVVLGTLGRQGNPKILERLEMKMGDKGFDYTV 326

Query: 543  ILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIAXXXXXXXXXX 364
            +LMSE+SP RI+LF DS+DAWIQIACPRLSIDWG+AF KP+LTPFEAEIA          
Sbjct: 327  VLMSELSPYRISLFEDSVDAWIQIACPRLSIDWGDAFVKPVLTPFEAEIALGLIPGWWEK 386

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVADAATDYPMDYYAKNGGEWNSAY 184
                                                  D   DYPMDYYA++GGEWNS+Y
Sbjct: 387  TQVQKQGCEDVTGCNKSDCCSNGSCGNAK------ATEDFGGDYPMDYYAQDGGEWNSSY 440

Query: 183  SNKSSHPPRR 154
              K S P R+
Sbjct: 441  MKKPSRPARK 450


>ref|XP_003533490.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 467

 Score =  558 bits (1439), Expect = e-156
 Identities = 281/433 (64%), Positives = 326/433 (75%), Gaps = 7/433 (1%)
 Frame = -2

Query: 1431 FIKNQIPDSITNDPALNASLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 1252
            F+KNQIP+SI NDP LNA++SVLPSNY+FEVHKC+WR+L+SGAKRVALQFPEGLLMYSL 
Sbjct: 37   FVKNQIPESILNDPVLNAAISVLPSNYNFEVHKCVWRVLSSGAKRVALQFPEGLLMYSLP 96

Query: 1251 LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 1072
            LSDI T++  +  C+VLGDVTYGACCVDD +A+ALGADLLIHYGHSCL+PIDST IP LY
Sbjct: 97   LSDILTSFAAVTHCYVLGDVTYGACCVDDLAASALGADLLIHYGHSCLVPIDSTTIPCLY 156

Query: 1071 VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 892
            +FV+IKIDV   +DT+ LN+     K K L +AGTIQF+SAIR AKP LE  GF VL+PQ
Sbjct: 157  IFVDIKIDVPHFVDTLILNLH----KAKTLVIAGTIQFASAIRTAKPQLEELGFRVLIPQ 212

Query: 891  SKPLSAGEVLGCTSPTIPK------GSADVLIFVADGRFHLEAFMIANPGIKAFRYDPYL 730
            SKPLSAGEVLGCT+P +        G + VL+FVADGRFHLEAFMIANPGI+AFRYDPY+
Sbjct: 213  SKPLSAGEVLGCTAPKVSSKLLGDDGESSVLVFVADGRFHLEAFMIANPGIRAFRYDPYM 272

Query: 729  GVLFLEEYDHDGMKKVRKNAIIKAR-EASCWGIILGTLGRQGNPRILKRLQSKMKERGFT 553
            G LFLEEYDH GMK+ RKNAI KAR EA  WG++LGTLGRQGNPRIL+RL+  M++RGF 
Sbjct: 273  GKLFLEEYDHLGMKRSRKNAIFKAREEARSWGLVLGTLGRQGNPRILERLEKMMRDRGFD 332

Query: 552  WTTILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIAXXXXXXX 373
            +T +LMSE+SPARIALF DSIDAWIQIACPRLSIDWGEAF KP+LTPFEA+IA       
Sbjct: 333  YTVVLMSEMSPARIALFEDSIDAWIQIACPRLSIDWGEAFVKPVLTPFEADIALGVIPGW 392

Query: 372  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVADAATDYPMDYYAKNGGEWN 193
                                                     D   DYPMDYYA++GGEWN
Sbjct: 393  WEKNNEVVCCNKSGSCCGDAKGGG----------------EDFGGDYPMDYYAQDGGEWN 436

Query: 192  SAYSNKSSHPPRR 154
            S+Y  KS+ PP R
Sbjct: 437  SSYVIKSTRPPAR 449


>ref|XP_003540663.1| PREDICTED: diphthamide biosynthesis protein 1-like [Glycine max]
          Length = 459

 Score =  557 bits (1435), Expect = e-156
 Identities = 281/435 (64%), Positives = 326/435 (74%), Gaps = 9/435 (2%)
 Frame = -2

Query: 1431 FIKNQIPDSITNDPALNASLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 1252
            F+KNQIPDSI N+P L+A++SVLPSNY+FEVHKC+WR+L++GAKRVALQFPEGLLMYSL 
Sbjct: 29   FVKNQIPDSILNNPLLSAAISVLPSNYNFEVHKCVWRVLSTGAKRVALQFPEGLLMYSLP 88

Query: 1251 LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 1072
            LSDIFTT+  +  CFVL DVTYGACCVDD +A+ALGADLLIHYGHSCL+PID+T IP LY
Sbjct: 89   LSDIFTTFAGVTHCFVLADVTYGACCVDDLAASALGADLLIHYGHSCLVPIDATTIPCLY 148

Query: 1071 VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 892
            VFV+IKIDV   +DT+ LN+     +TK L +AGTIQF+SAIRAAKP LE  GF VL+PQ
Sbjct: 149  VFVDIKIDVPHFVDTLSLNL---LAQTKTLVVAGTIQFASAIRAAKPQLEELGFRVLIPQ 205

Query: 891  SKPLSAGEVLGCTSPTIPK-----GSAD----VLIFVADGRFHLEAFMIANPGIKAFRYD 739
            SKPLSAGEVLGCT+P +       G  D    VL+FVADGRFHLEAFMIANPGI+AFRYD
Sbjct: 206  SKPLSAGEVLGCTAPKVSSSKLLGGGGDIGECVLVFVADGRFHLEAFMIANPGIRAFRYD 265

Query: 738  PYLGVLFLEEYDHDGMKKVRKNAIIKAREASCWGIILGTLGRQGNPRILKRLQSKMKERG 559
            PY+G LFLEEYDH GMK+ RKNAI KAREA  WG++LGTLGRQGNPRIL+RL+  M+ERG
Sbjct: 266  PYMGKLFLEEYDHLGMKRSRKNAIFKAREARSWGLVLGTLGRQGNPRILERLERMMRERG 325

Query: 558  FTWTTILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIAXXXXX 379
              +T +LMSE+SP RIALF DS+DAWIQIACPRLSIDWGEAF KP+LTPFEAE+A     
Sbjct: 326  LDYTVVLMSEMSPTRIALFEDSLDAWIQIACPRLSIDWGEAFVKPVLTPFEAEVALGVIP 385

Query: 378  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVADAATDYPMDYYAKNGGE 199
                                                       D   DYPMDYYA++GGE
Sbjct: 386  GWWEKNEVCEEGEGCCNKSGSCCEDAKGG-------------EDFGGDYPMDYYAQDGGE 432

Query: 198  WNSAYSNKSSHPPRR 154
            WNS+Y  KS+ P RR
Sbjct: 433  WNSSYVKKSTRPARR 447


>ref|XP_002265458.1| PREDICTED: diphthamide biosynthesis protein 1-like [Vitis vinifera]
          Length = 461

 Score =  557 bits (1435), Expect = e-156
 Identities = 284/430 (66%), Positives = 323/430 (75%), Gaps = 4/430 (0%)
 Frame = -2

Query: 1431 FIKNQIPDSITNDPALNASLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 1252
            F+KNQIPDSI N+ ALNA++++LPSNY+FEVHKC+WRIL+S AKRVALQFPEGLLMYSL 
Sbjct: 33   FVKNQIPDSIINNAALNAAIALLPSNYNFEVHKCVWRILSSRAKRVALQFPEGLLMYSLH 92

Query: 1251 LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 1072
            LSDIFT+Y   D C VLGDVTYGACCVDD SA AL ADLLIHYGHSCL+PID+T IP LY
Sbjct: 93   LSDIFTSYAGADHCLVLGDVTYGACCVDDLSAAALEADLLIHYGHSCLVPIDATSIPCLY 152

Query: 1071 VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 892
            VFVEI IDV+ LI TV+LN+        ++ LAGTIQFSSAIRAAKP LE AGF VL+PQ
Sbjct: 153  VFVEIAIDVDLLIGTVKLNLPP----AGQIVLAGTIQFSSAIRAAKPELEKAGFRVLIPQ 208

Query: 891  SKPLSAGEVLGCTSPTIPKGS--AD--VLIFVADGRFHLEAFMIANPGIKAFRYDPYLGV 724
            SKPLSAGEVLGCT+P I K S  +D  V +FVADGRFHLEAFMIANP IKA+RYDPY+G 
Sbjct: 209  SKPLSAGEVLGCTAPKISKTSFISDDVVAVFVADGRFHLEAFMIANPAIKAYRYDPYIGR 268

Query: 723  LFLEEYDHDGMKKVRKNAIIKAREASCWGIILGTLGRQGNPRILKRLQSKMKERGFTWTT 544
            L LEEYDH GMK  RKNAI+KARE   WGI+LGTLGRQGNPRIL  LQ +M+E+GF+WT 
Sbjct: 269  LLLEEYDHKGMKDSRKNAILKAREGKNWGIVLGTLGRQGNPRILNMLQDRMREKGFSWTV 328

Query: 543  ILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIAXXXXXXXXXX 364
            +LMSEISPAR+ LF DS+DAWIQIACPRLSIDWG+AF KPLL PFEAEIA          
Sbjct: 329  VLMSEISPARVLLFGDSVDAWIQIACPRLSIDWGDAFGKPLLNPFEAEIALGFIPGWWEK 388

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVADAATDYPMDYYAKNGGEWNSAY 184
                                                  D + DYPMDYYA++GGEWNS+Y
Sbjct: 389  ASIANSDCIKNGLCCNDNCDNGVCAKDK---------VDVSQDYPMDYYAQDGGEWNSSY 439

Query: 183  SNKSSHPPRR 154
            + KS+ P RR
Sbjct: 440  AKKSTRPSRR 449


>ref|XP_002325444.1| predicted protein [Populus trichocarpa] gi|222862319|gb|EEE99825.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  556 bits (1432), Expect = e-156
 Identities = 283/435 (65%), Positives = 324/435 (74%), Gaps = 9/435 (2%)
 Frame = -2

Query: 1431 FIKNQIPDSITNDPALNASLSVLPSNYSFEVHKCIWRILTSGAKRVALQFPEGLLMYSLV 1252
            FIK+QIPDSI NDP+LNAS+S+LPSNY+FE+HKCIWR+ ++ AKR+ALQ PEGLLMYSL+
Sbjct: 17   FIKSQIPDSILNDPSLNASISLLPSNYNFEIHKCIWRVRSTNAKRIALQLPEGLLMYSLI 76

Query: 1251 LSDIFTTYGKLDDCFVLGDVTYGACCVDDFSATALGADLLIHYGHSCLIPIDSTKIPSLY 1072
            LSDIFT +  +  CFVLGDVTYGACCVDD SA AL ADLLIHYGHSCLIPID+TKIP LY
Sbjct: 77   LSDIFTAFADVTHCFVLGDVTYGACCVDDLSALALDADLLIHYGHSCLIPIDATKIPCLY 136

Query: 1071 VFVEIKIDVERLIDTVRLNIDEEQTKTKKLALAGTIQFSSAIRAAKPALENAGFEVLVPQ 892
            VFVEIKIDV RLI+T+ LN     T  + + LAGTIQF+SAIR AKP LEN GF VL+PQ
Sbjct: 137  VFVEIKIDVSRLINTISLNFG---THKRNIVLAGTIQFASAIREAKPELENNGFVVLIPQ 193

Query: 891  SKPLSAGEVLGCTSPTIPKGSAD---------VLIFVADGRFHLEAFMIANPGIKAFRYD 739
            SKPLSAGEVLGCT+P + K             VL+FVADGRFHLEAFMIANPGIKAFRYD
Sbjct: 194  SKPLSAGEVLGCTAPKMSKNVVGNLGFSEEEMVLVFVADGRFHLEAFMIANPGIKAFRYD 253

Query: 738  PYLGVLFLEEYDHDGMKKVRKNAIIKAREASCWGIILGTLGRQGNPRILKRLQSKMKERG 559
            PYLG LFLEEYDH GMK+VRK AI +A+ A  WG++LGTLGRQGNPRIL+RL+ KM E+G
Sbjct: 254  PYLGKLFLEEYDHKGMKEVRKKAIERAKGARSWGVVLGTLGRQGNPRILERLEKKMGEKG 313

Query: 558  FTWTTILMSEISPARIALFADSIDAWIQIACPRLSIDWGEAFEKPLLTPFEAEIAXXXXX 379
            F +  +LMSEISP RIALF DS+DAWIQIACPRLSIDWG+AF+KPLLTPFEAEIA     
Sbjct: 314  FDYMVVLMSEISPGRIALFEDSVDAWIQIACPRLSIDWGDAFKKPLLTPFEAEIA----- 368

Query: 378  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVADAATDYPMDYYAKNGGE 199
                                                  K V  D   +YPMDYYA++GGE
Sbjct: 369  ---------------------------LGDLAGCNGDAKGVEKDFGGEYPMDYYAQDGGE 401

Query: 198  WNSAYSNKSSHPPRR 154
            WNS+Y  K + P RR
Sbjct: 402  WNSSYVKKPTRPVRR 416


Top