BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001118
         (1769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 ...   822   0.0  
dbj|BAE71307.1| putative WD-40 repeat protein [Trifolium pratense]    817   0.0  
ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 ...   817   0.0  
ref|XP_004141526.1| PREDICTED: ribosome biogenesis protein BOP1 ...   814   0.0  
ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 ...   806   0.0  

>ref|XP_003540150.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 716

 Score =  822 bits (2122), Expect = 0.0
 Identities = 379/567 (66%), Positives = 461/567 (81%), Gaps = 1/567 (0%)
 Frame = -3

Query: 1767 SRNWRKFYDDYNDEEVQILKEQAKMILRLSKGKTPHQDVDPYQPSVDWFHWPDSGHPISA 1588
            S+NWRK YD+YNDE V++ K++ K++ RL K + PH D DPY   VDWF W D+ HP+S 
Sbjct: 151  SKNWRKIYDEYNDEVVELTKDEIKLVRRLLKNRAPHSDFDPYPDGVDWFKWEDAKHPLSN 210

Query: 1587 APEPKRRFIPSKQEAKKVVALIRAIRKGHIKFDKPKEEESGPYLLWGDDSTSTGRAGS-S 1411
            APEPKRRFIPSK EAKKVV  +RAIR+G I FDKPKEE+ GPYLLWGDDS ST RA   +
Sbjct: 211  APEPKRRFIPSKWEAKKVVQYVRAIRQGLITFDKPKEED-GPYLLWGDDSGSTERANHLA 269

Query: 1410 YIPAPKPKLPGHEESYNPSLEYIPTQEEVDKYQLLYEEDRPKYIPKRFESLRTVPAYLNS 1231
            YIPAPK KLPGH+ESYNP LEYIPTQEEV+ YQL++EEDRPK+IPKRF S+R++PAY N+
Sbjct: 270  YIPAPKQKLPGHDESYNPPLEYIPTQEEVNSYQLMFEEDRPKFIPKRFASMRSIPAYENA 329

Query: 1230 LKEVFDRCLDLYLCPRTRKKRINIDXXXXXXXXXXXXXXXXXXSTCYLEYKGHKGAVMSI 1051
            +K+ F+RCLDLYLCPR RKKR+NID                  +TCY+EYKGH+ AV SI
Sbjct: 330  MKDCFERCLDLYLCPRVRKKRLNIDPESLKPKLPSRKELKPYPTTCYIEYKGHEDAVTSI 389

Query: 1050 SIQVSGQWLASGSSDGTVRIWEVETGRCVRIWEVGEAVHYVAWNPVPELRILAVSMGHDV 871
            S++ SGQW+ASGSSDGTVRIWEVETGRC+R WEVGE+V  VAWNP+P + +LAVS+G DV
Sbjct: 390  SLEASGQWMASGSSDGTVRIWEVETGRCLRRWEVGESVSCVAWNPLPNIHLLAVSVGQDV 449

Query: 870  XXXXXXXXXXXXXEKIKELLHIEAPQPLDESGHVTSAVNWLQHDKYDGIRLKHFKAVSSV 691
                         ++IKELL +++   LD+SG+   +V+WL+ DK+ G+RL+HFK V++V
Sbjct: 450  LLLNTCLGDDEEQKQIKELLWVDSSTALDDSGNQAPSVSWLKDDKHMGLRLRHFKTVTAV 509

Query: 690  EWHYRGDYFSTVVPTGDSKAILIHQLSKKHSQNIPFKLHGLPVSSVFHPSRPIFFIATKK 511
            EWH +GDYFSTV+P G+S+A+LIHQLSKK +Q +PFKLHGL V S FHPSR IFF+ TKK
Sbjct: 510  EWHRKGDYFSTVMPAGESRAVLIHQLSKKLTQKLPFKLHGLAVRSTFHPSRSIFFVCTKK 569

Query: 510  TIRVFDLVKRKLIRTLEPGVREVSSIAIHPAGDNLIVGSREGKLCWFDMDLSSQPYRKLN 331
            ++RV+DL+K K+I+ L+ G+RE SSIA+HP GDNLIVGS+EGK+CWFDMDLSS+PY+ L 
Sbjct: 570  SVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSSKPYKILK 629

Query: 330  CHPKDITNVAFHRSYPLFASCSDDSTAYVFHGMVYSDLNENPLIVPLEILRGHTSTNGRG 151
            CHPKDI NV FHRSYPLFASCSDD TAYVFHGMVYSDLN+NPLIVPLEILRGHT++NGRG
Sbjct: 630  CHPKDINNVIFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTNSNGRG 689

Query: 150  VMDCSFHPRQPWLFTAGADSVIKLYCH 70
            ++DC FHPRQPWLFTAGAD +IKLYCH
Sbjct: 690  ILDCKFHPRQPWLFTAGADKLIKLYCH 716


>dbj|BAE71307.1| putative WD-40 repeat protein [Trifolium pratense]
          Length = 738

 Score =  817 bits (2111), Expect = 0.0
 Identities = 375/567 (66%), Positives = 457/567 (80%), Gaps = 1/567 (0%)
 Frame = -3

Query: 1767 SRNWRKFYDDYNDEEVQILKEQAKMILRLSKGKTPHQDVDPYQPSVDWFHWPDSGHPISA 1588
            S+NWRK YD+YNDE V++ K++ K++ +L K + PH D DPY   VDWF W  + HP+S 
Sbjct: 172  SKNWRKIYDEYNDEVVELTKDEIKIVRKLMKNQAPHTDFDPYPTYVDWFKWDGAKHPLSN 231

Query: 1587 APEPKRRFIPSKQEAKKVVALIRAIRKGHIKFDKPKEEESGPYLLWGDDSTSTGRAGS-S 1411
            APEPKRRFIPSK EAKKVV  +RAIR G I FDKPKEE+   YLLW DDS  T +A   +
Sbjct: 232  APEPKRRFIPSKWEAKKVVQYVRAIRNGSITFDKPKEEDDA-YLLWEDDSGLTEKANHLA 290

Query: 1410 YIPAPKPKLPGHEESYNPSLEYIPTQEEVDKYQLLYEEDRPKYIPKRFESLRTVPAYLNS 1231
            Y+PAPK KLPGH+ESYNP LEYIPTQEE++ YQL+YEEDRPK+IPKRF S+R++PAY N+
Sbjct: 291  YVPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMYEEDRPKFIPKRFTSMRSIPAYENA 350

Query: 1230 LKEVFDRCLDLYLCPRTRKKRINIDXXXXXXXXXXXXXXXXXXSTCYLEYKGHKGAVMSI 1051
            +KE F+RCLDLYLCPR R+KR+NID                   TCY+EYKGH+GAV SI
Sbjct: 351  MKESFERCLDLYLCPRVRRKRLNIDPESLKPKLPNKKELKPYPITCYIEYKGHEGAVTSI 410

Query: 1050 SIQVSGQWLASGSSDGTVRIWEVETGRCVRIWEVGEAVHYVAWNPVPELRILAVSMGHDV 871
            S++ SGQW+ASGSSDGTVR+WEVETGRC+R WE+GEAV+ V WNP+P++ ILAVS+G DV
Sbjct: 411  SVEASGQWMASGSSDGTVRVWEVETGRCLRRWEIGEAVNCVTWNPLPDIHILAVSVGQDV 470

Query: 870  XXXXXXXXXXXXXEKIKELLHIEAPQPLDESGHVTSAVNWLQHDKYDGIRLKHFKAVSSV 691
                         +++KELL +++P+  +E+G    +V+WL+ DK+DGIRL+H K V+SV
Sbjct: 471  LLLNTGLGDEEEQQRVKELLLVDSPKASEETGKKAPSVSWLKDDKHDGIRLRHLKTVTSV 530

Query: 690  EWHYRGDYFSTVVPTGDSKAILIHQLSKKHSQNIPFKLHGLPVSSVFHPSRPIFFIATKK 511
            EWH +GDYFSTV+P G+S+++LIHQLSKK SQ +PFKLHGL V S FHPSR IFFI TKK
Sbjct: 531  EWHRKGDYFSTVMPAGESRSVLIHQLSKKLSQKLPFKLHGLAVGSTFHPSRSIFFICTKK 590

Query: 510  TIRVFDLVKRKLIRTLEPGVREVSSIAIHPAGDNLIVGSREGKLCWFDMDLSSQPYRKLN 331
            T+RV+DL+KRKLI+TL  G++E SSIA+HP GDNLIVGS+EGKLCWFDMDLS++PY+ L 
Sbjct: 591  TVRVYDLLKRKLIKTLYTGLKEASSIAVHPGGDNLIVGSKEGKLCWFDMDLSAKPYKTLK 650

Query: 330  CHPKDITNVAFHRSYPLFASCSDDSTAYVFHGMVYSDLNENPLIVPLEILRGHTSTNGRG 151
            CHPKDI NV FHRSYPLFASCSDDSTAYVFHGMVYSDLN+NPLIVPLEILRGH ++NGRG
Sbjct: 651  CHPKDINNVVFHRSYPLFASCSDDSTAYVFHGMVYSDLNQNPLIVPLEILRGHANSNGRG 710

Query: 150  VMDCSFHPRQPWLFTAGADSVIKLYCH 70
            ++DC FHPRQPWLFTAGAD +IKLYCH
Sbjct: 711  ILDCKFHPRQPWLFTAGADKLIKLYCH 737


>ref|XP_003548639.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Glycine max]
          Length = 718

 Score =  817 bits (2110), Expect = 0.0
 Identities = 376/567 (66%), Positives = 460/567 (81%), Gaps = 1/567 (0%)
 Frame = -3

Query: 1767 SRNWRKFYDDYNDEEVQILKEQAKMILRLSKGKTPHQDVDPYQPSVDWFHWPDSGHPISA 1588
            S+NWRK YD+YNDE V++ K++ K++ RL K + PH D DPY  SVDWF W D+ HP+S 
Sbjct: 153  SKNWRKIYDEYNDEVVELTKDEIKLVRRLLKNRAPHSDFDPYPDSVDWFKWEDAKHPLSN 212

Query: 1587 APEPKRRFIPSKQEAKKVVALIRAIRKGHIKFDKPKEEESGPYLLWGDDSTSTGRAGS-S 1411
            APEPKRRFIPSK EAKKVV  +RAIR+G I FDKPKEE+ GPY LWGDDS ST RA   +
Sbjct: 213  APEPKRRFIPSKWEAKKVVQYVRAIRQGLITFDKPKEED-GPYHLWGDDSGSTERANHLA 271

Query: 1410 YIPAPKPKLPGHEESYNPSLEYIPTQEEVDKYQLLYEEDRPKYIPKRFESLRTVPAYLNS 1231
            YIPAPK KLPGH+ESYNP LEYIPTQEE++ YQL++EEDRPK+IPKRF S+R++PAY N+
Sbjct: 272  YIPAPKQKLPGHDESYNPPLEYIPTQEEINSYQLMFEEDRPKFIPKRFASMRSIPAYENA 331

Query: 1230 LKEVFDRCLDLYLCPRTRKKRINIDXXXXXXXXXXXXXXXXXXSTCYLEYKGHKGAVMSI 1051
            +K+ F+RCLDLYLCPR RKKR+NID                  +TCY+EYKGH+ AV SI
Sbjct: 332  MKDCFERCLDLYLCPRVRKKRLNIDPESLKPKLPSRKELKPYPTTCYIEYKGHEDAVTSI 391

Query: 1050 SIQVSGQWLASGSSDGTVRIWEVETGRCVRIWEVGEAVHYVAWNPVPELRILAVSMGHDV 871
            S++ SGQW+ASGS DGTVRIWEVETGRC+R WEVGE+V  VAWNP+P++ +LAVS+G DV
Sbjct: 392  SLEASGQWMASGSRDGTVRIWEVETGRCLRRWEVGESVSCVAWNPLPDIHLLAVSVGQDV 451

Query: 870  XXXXXXXXXXXXXEKIKELLHIEAPQPLDESGHVTSAVNWLQHDKYDGIRLKHFKAVSSV 691
                         ++IKELL +++    D+SG+   +V+WL+ DK+ G+RL+HFK V++V
Sbjct: 452  LLLNTCLGDEEEQKRIKELLWVDSSTASDDSGNKAPSVSWLKDDKHMGLRLRHFKTVTAV 511

Query: 690  EWHYRGDYFSTVVPTGDSKAILIHQLSKKHSQNIPFKLHGLPVSSVFHPSRPIFFIATKK 511
            EWH +GDYFSTV+P G+S+A+LIHQLSKK +Q +PFKLHGL V S FHPSR IFF+ TKK
Sbjct: 512  EWHRKGDYFSTVMPAGESRAVLIHQLSKKLTQRLPFKLHGLAVRSTFHPSRSIFFVCTKK 571

Query: 510  TIRVFDLVKRKLIRTLEPGVREVSSIAIHPAGDNLIVGSREGKLCWFDMDLSSQPYRKLN 331
            ++RV+DL+K K+I+ L+ G+RE SSIA+HP GDNLIVGS+EGK+CWFDMDLSS+PY+ L 
Sbjct: 572  SVRVYDLLKTKIIKKLDTGLREASSIAVHPGGDNLIVGSKEGKMCWFDMDLSSKPYKILK 631

Query: 330  CHPKDITNVAFHRSYPLFASCSDDSTAYVFHGMVYSDLNENPLIVPLEILRGHTSTNGRG 151
            CHPKDI NV FHRSYPLFASCSDD TAYVFHGMVYSDLN+NPLIVPLEILRGHT++NGRG
Sbjct: 632  CHPKDINNVIFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTNSNGRG 691

Query: 150  VMDCSFHPRQPWLFTAGADSVIKLYCH 70
            ++DC FHPRQPWLFTAGAD +IKLYCH
Sbjct: 692  ILDCKFHPRQPWLFTAGADKLIKLYCH 718


>ref|XP_004141526.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Cucumis sativus]
            gi|449517291|ref|XP_004165679.1| PREDICTED: ribosome
            biogenesis protein BOP1 homolog [Cucumis sativus]
          Length = 724

 Score =  814 bits (2102), Expect = 0.0
 Identities = 384/567 (67%), Positives = 456/567 (80%), Gaps = 1/567 (0%)
 Frame = -3

Query: 1767 SRNWRKFYDDYNDEEVQILKEQAKMILRLSKGKTPHQDVDPYQPSVDWFHWPDSGHPISA 1588
            S++WRK YD+YNDE +++ KE+ + + RL KGK PH D DP+ P VDWF W D+ HP+S 
Sbjct: 159  SKSWRKVYDEYNDEIIELSKEEVRQLRRLLKGKAPHADFDPHAPYVDWFKWDDAKHPLSN 218

Query: 1587 APEPKRRFIPSKQEAKKVVALIRAIRKGHIKFDKPKEEESGPYLLWGDDSTSTGRAGS-S 1411
            APEPKRRFI SK EAKKVV L+RAIR GHIKFDKPKEE+   + LWGDDS++T +    S
Sbjct: 219  APEPKRRFIRSKWEAKKVVRLVRAIRNGHIKFDKPKEEQQF-HDLWGDDSSTTEKTSHLS 277

Query: 1410 YIPAPKPKLPGHEESYNPSLEYIPTQEEVDKYQLLYEEDRPKYIPKRFESLRTVPAYLNS 1231
            YIPAPKPKLPGH+ESYNPSLEYIPTQEE++ YQL+YEEDRPK+IP+RF S+R+VPAY N+
Sbjct: 278  YIPAPKPKLPGHDESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPRRFTSMRSVPAYDNA 337

Query: 1230 LKEVFDRCLDLYLCPRTRKKRINIDXXXXXXXXXXXXXXXXXXSTCYLEYKGHKGAVMSI 1051
            LK+ F+RCLDLYLCPR RKKRINID                  +TCYLEY+GHK AVMSI
Sbjct: 338  LKDAFERCLDLYLCPRVRKKRINIDPESLKPKLPNRKDLRPYPTTCYLEYRGHKDAVMSI 397

Query: 1050 SIQVSGQWLASGSSDGTVRIWEVETGRCVRIWEVGEAVHYVAWNPVPELRILAVSMGHDV 871
            S + +GQW+ASGS DGTVRIWEVETGRC+++ E+GE V YVAWNP P+L ILA + G DV
Sbjct: 398  STEANGQWIASGSLDGTVRIWEVETGRCLKVLELGEPVKYVAWNPRPDLPILAAAAGADV 457

Query: 870  XXXXXXXXXXXXXEKIKELLHIEAPQPLDESGHVTSAVNWLQHDKYDGIRLKHFKAVSSV 691
                          KIKE+LH++     + SG+ T A  WLQ DK  GIRL+HFK+VS+V
Sbjct: 458  LLLNTGLGDGEVQAKIKEVLHVDKLPVTENSGNKTPAATWLQDDKTGGIRLRHFKSVSAV 517

Query: 690  EWHYRGDYFSTVVPTGDSKAILIHQLSKKHSQNIPFKLHGLPVSSVFHPSRPIFFIATKK 511
            EWH +GDY STV+P G+SKA+LIHQLSKK +Q IPFKLHGLPVSSVFHP++ I F++TKK
Sbjct: 518  EWHRKGDYLSTVLPAGESKAVLIHQLSKKLTQKIPFKLHGLPVSSVFHPTQSILFVSTKK 577

Query: 510  TIRVFDLVKRKLIRTLEPGVREVSSIAIHPAGDNLIVGSREGKLCWFDMDLSSQPYRKLN 331
             +RV++L+K+KL++ L+ G+REVSSIA+HPAGDN+IVGSREGKLCWFDMDLSS+PY+ L 
Sbjct: 578  EVRVYNLLKQKLLKKLKTGLREVSSIAVHPAGDNVIVGSREGKLCWFDMDLSSEPYKILR 637

Query: 330  CHPKDITNVAFHRSYPLFASCSDDSTAYVFHGMVYSDLNENPLIVPLEILRGHTSTNGRG 151
            CHPKDITNVAFHRS PLFASCSDD TAYVFHGMVYSDL +NPLI PLEILRGH + NGRG
Sbjct: 638  CHPKDITNVAFHRSRPLFASCSDDGTAYVFHGMVYSDLTQNPLITPLEILRGHKTVNGRG 697

Query: 150  VMDCSFHPRQPWLFTAGADSVIKLYCH 70
            VMDC FHP QPWLFTAGADSVIKLYCH
Sbjct: 698  VMDCKFHPMQPWLFTAGADSVIKLYCH 724


>ref|XP_003635118.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Vitis vinifera]
          Length = 691

 Score =  806 bits (2082), Expect = 0.0
 Identities = 383/541 (70%), Positives = 444/541 (82%), Gaps = 2/541 (0%)
 Frame = -3

Query: 1767 SRNWRKFYDDYNDEEVQILKEQAKMILRLSKGKTPHQDVDPYQPSVDWFHWPDSGHPISA 1588
            S+NWRK YD+YNDEEV++ K + ++I RL KGK PH + DPY P VDWF W D+ HP+S 
Sbjct: 152  SKNWRKIYDEYNDEEVELTKRETRLIRRLLKGKAPHAEFDPYAPYVDWFKWDDAKHPLSN 211

Query: 1587 APEPKRRFIPSKQEAKKVVALIRAIRKGHIKFDKPKEEESGPYLLWGDDSTSTGRAGS-- 1414
            APEPKRRFIPSK E+KKVV  +RAIRKG IKFDKPKEE    Y LWGDDS+ST +AG   
Sbjct: 212  APEPKRRFIPSKWESKKVVEYVRAIRKGLIKFDKPKEEPR-VYHLWGDDSSSTEKAGHGL 270

Query: 1413 SYIPAPKPKLPGHEESYNPSLEYIPTQEEVDKYQLLYEEDRPKYIPKRFESLRTVPAYLN 1234
            +YIPAPK KLPGHEESYNPSLEYIPTQEE++ YQL+YEEDRPK+IP+RF SLR+VPAY N
Sbjct: 271  AYIPAPKSKLPGHEESYNPSLEYIPTQEEINSYQLMYEEDRPKFIPRRFLSLRSVPAYEN 330

Query: 1233 SLKEVFDRCLDLYLCPRTRKKRINIDXXXXXXXXXXXXXXXXXXSTCYLEYKGHKGAVMS 1054
            ++KE FDRCLDLYLCPR RKKRINID                   TCYLEYKGHKGAVMS
Sbjct: 331  AVKESFDRCLDLYLCPRARKKRINIDPESLKPKLPSRKDLKPYPVTCYLEYKGHKGAVMS 390

Query: 1053 ISIQVSGQWLASGSSDGTVRIWEVETGRCVRIWEVGEAVHYVAWNPVPELRILAVSMGHD 874
            I+ + SGQW+ASGS DG+VR+WEVETGRC R+WE+GEAVHYVAWNP+P L ILAVS G D
Sbjct: 391  IATEASGQWIASGSIDGSVRVWEVETGRCRRVWEIGEAVHYVAWNPLPGLHILAVSSGQD 450

Query: 873  VXXXXXXXXXXXXXEKIKELLHIEAPQPLDESGHVTSAVNWLQHDKYDGIRLKHFKAVSS 694
            V             + I++LL IE P  +D++G+ TS V+W+Q DK+ GIRLKHFK VSS
Sbjct: 451  VLLLNTGLGNDEEQKNIEQLLRIETPGSMDDTGNTTSIVSWVQDDKHGGIRLKHFKTVSS 510

Query: 693  VEWHYRGDYFSTVVPTGDSKAILIHQLSKKHSQNIPFKLHGLPVSSVFHPSRPIFFIATK 514
            VEWH +GDY STV+P G+S+AILIHQLSKK +Q IPFKLHGLPVSS+FHP+R IFFI+TK
Sbjct: 511  VEWHRKGDYLSTVMPAGESRAILIHQLSKKLTQRIPFKLHGLPVSSIFHPTRSIFFISTK 570

Query: 513  KTIRVFDLVKRKLIRTLEPGVREVSSIAIHPAGDNLIVGSREGKLCWFDMDLSSQPYRKL 334
            K +RV+DL+K+KL++ LE G+REVSSIA+HPAGDN+IVGSREGKLCWFDMDLSSQPYR L
Sbjct: 571  KNVRVYDLLKQKLVKKLETGLREVSSIAVHPAGDNVIVGSREGKLCWFDMDLSSQPYRIL 630

Query: 333  NCHPKDITNVAFHRSYPLFASCSDDSTAYVFHGMVYSDLNENPLIVPLEILRGHTSTNGR 154
             CHPKDITNVAFH SYPLFA+CSDD TAYVFHGMVYSDLN+NPLIVPLEILRGH+STNGR
Sbjct: 631  KCHPKDITNVAFHHSYPLFATCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHSSTNGR 690

Query: 153  G 151
            G
Sbjct: 691  G 691