BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001115
         (1811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28616.3| unnamed protein product [Vitis vinifera]              422   e-115
ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containin...   385   e-104
ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin...   380   e-103
ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containin...   379   e-102
ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101

>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  422 bits (1084), Expect = e-115
 Identities = 247/480 (51%), Positives = 296/480 (61%), Gaps = 12/480 (2%)
 Frame = -1

Query: 1487 MDAYEATRIVFSRIQNIDPENASKIMGFLLIQDHGDKEMIRLAFGPETLIHSLIIKAYNE 1308
            MDAYEATRIVFSRIQN+DPENASKIMG LLIQDHG+KEMIRLAFGPE L+HS+I+KA  E
Sbjct: 1    MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60

Query: 1307 LGXXXXXXXXXXXXXXXXXXSRQXXXXXXXXXXXXXXXXXXXXXATNGNDNNAFNRVKNN 1128
            LG                                           T    ++    + NN
Sbjct: 61   LGISSNTPS------------------------------------TPSTPSSPSPFLSNN 84

Query: 1127 HTEFIDELHLQDQLAFLNDASPKNPDLF---YPSSELATSPSDSATDGMLFNSYSPNWGV 957
                   L    Q +F + +SP +  +F    P  +L  SP+ +A +G+           
Sbjct: 85   ------PLSQSRQTSFSSTSSPSSFSVFSDFQPQDDLI-SPNSAAANGL----------- 126

Query: 956  NNEQHRRSLSVTDIGLGGSDP---FGWKPCLYYARGYCKNGTSCRFLHAPPDSP----DS 798
                HRRS SV+DI L   DP   FGWKPCLY+ARGYCKNGTSCRFLH    +     + 
Sbjct: 127  ---PHRRSCSVSDICLASDDPASGFGWKPCLYFARGYCKNGTSCRFLHGGDSASVVGSEG 183

Query: 797  TTNVGSPGKLDIMEQCQELLLRSKSXXXXXXXXXXQRXXXXXXXXXXXXXXXXXAKCPNF 618
               VGSP K+++MEQC ELL RSKS           +                 AKC NF
Sbjct: 184  AAMVGSPSKIEMMEQCHELL-RSKSAQQ--------QRLAAASQIMASASFPYSAKCMNF 234

Query: 617  LMQQQQNDTRXXXXXXAGLMLGGEDLHQYGRSRIDKNDFASITAGMVNPASRQIYLTFPA 438
            L+QQQQ D++         ++ G+D+H++GRSR+++ +F +  AGMVNP SRQIYLTFPA
Sbjct: 235  LLQQQQTDSQRAA----AALMMGDDMHKFGRSRLERGEFMNGGAGMVNPGSRQIYLTFPA 290

Query: 437  DSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARV 258
            DSTFREEDVSNYFSI+GPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARV
Sbjct: 291  DSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARV 350

Query: 257  LVKPYKEKGKIPDRK--QQQQLVERSDFPPSTTLSGHDNRDPYDLQVMQMQSSPRLLYNT 84
            LVKPYKEKGK+PD+K  QQQQ VER +F   +T +G D+RDPYDLQ+       R+ YNT
Sbjct: 351  LVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYDLQL-----GARMFYNT 405


>ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 704

 Score =  385 bits (988), Expect = e-104
 Identities = 217/364 (59%), Positives = 249/364 (68%), Gaps = 14/364 (3%)
 Frame = -1

Query: 1133 NNHTEFIDELHLQDQLAFLNDASP--------KNPDLFYPS-SELATSPSDSATDGMLFN 981
            N  ++ IDE  LQDQLAFLND SP         NPD+FYPS S+L++SP+ +A D  LF 
Sbjct: 143  NGGSDPIDEFQLQDQLAFLNDGSPTSTALSHKNNPDMFYPSNSDLSSSPT-TAADPTLFP 201

Query: 980  SYSPNWGVNNEQHRRSLSVTDIGLGGSDP---FGWKPCLYYARGYCKNGTSCRFLHAPPD 810
            SY   WG     HRRS SV D  LG  DP    GWKPCLY+ARGYCKNGTSCRFLH    
Sbjct: 202  SYG--WG--GSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLG 257

Query: 809  SPDSTTNVGSPGKLDIMEQCQELLLRSKSXXXXXXXXXXQRXXXXXXXXXXXXXXXXXAK 630
              D+   VGSP K+++MEQC ELL RSKS           +                  K
Sbjct: 258  DADAAM-VGSPSKIEMMEQCHELL-RSKSGQQ--------QRLAAASQLMASSTFPYSPK 307

Query: 629  CPNFLMQQQQNDTRXXXXXXAGLMLGGEDLHQYGRSRIDKNDFASITAGMVNPASRQIYL 450
            C NFL+QQQQNDT+         ++  EDLH++GRSR+++NDF+  + GMVNPASRQIYL
Sbjct: 308  CMNFLLQQQQNDTQRAAA---AALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYL 364

Query: 449  TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVC 270
            TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL+KGNPHFVC
Sbjct: 365  TFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVC 424

Query: 269  DARVLVKPYKEKGKIPD--RKQQQQLVERSDFPPSTTLSGHDNRDPYDLQVMQMQSSPRL 96
            DARVLVKPYKEKGK+PD  RK QQQ V+R DF P  T +G D RD +DLQ+       R+
Sbjct: 425  DARVLVKPYKEKGKVPDKYRKLQQQQVDRGDFSPCGTPTGLDARDQFDLQL-----GGRM 479

Query: 95   LYNT 84
             YNT
Sbjct: 480  FYNT 483



 Score =  108 bits (269), Expect = 6e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -1

Query: 1487 MDAYEATRIVFSRIQNIDPENASKIMGFLLIQDHGDKEMIRLAFGPETLIHSLIIKAYNE 1308
            MD YEATRIVFSRIQN+DPENASKIMG LL+QDHG+KEMIRLAFGPE L+HS+I+KA  E
Sbjct: 1    MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60

Query: 1307 LG 1302
            LG
Sbjct: 61   LG 62


>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 700

 Score =  380 bits (977), Expect = e-103
 Identities = 215/366 (58%), Positives = 250/366 (68%), Gaps = 16/366 (4%)
 Frame = -1

Query: 1133 NNHTEFIDELHLQDQLAFLNDASPK--------NPDLFYPS--SELATSPSDSATDGMLF 984
            N  ++ ID+  LQDQL+FLND SP         NPDLFYP+  S+L++SP+ +A D  LF
Sbjct: 137  NGGSDPIDDFQLQDQLSFLNDGSPTSTAFAHKTNPDLFYPTNNSDLSSSPT-TAVDPTLF 195

Query: 983  NSYSPNWGVNNEQHRRSLSVTDIGLGGSDP---FGWKPCLYYARGYCKNGTSCRFLHA-- 819
             SY   WG     HRRS SV D  LG  DP    GWKPCLY+ARGYCKNGTSCRFLH   
Sbjct: 196  PSYG--WG--GSIHRRSCSVNDACLGSEDPSSGLGWKPCLYFARGYCKNGTSCRFLHGGI 251

Query: 818  -PPDSPDSTTNVGSPGKLDIMEQCQELLLRSKSXXXXXXXXXXQRXXXXXXXXXXXXXXX 642
               D   +   VGSPGK+++MEQC ELL RSKS           +               
Sbjct: 252  GDADGGGAAAMVGSPGKIEMMEQCHELL-RSKSVQQ--------QRLAAASQLMASSTFP 302

Query: 641  XXAKCPNFLMQQQQNDTRXXXXXXAGLMLGGEDLHQYGRSRIDKNDFASITAGMVNPASR 462
               K  NFL+QQQQNDT+         ++  EDLH++GRSR+++NDF+  +  MVNPASR
Sbjct: 303  YSPKSMNFLLQQQQNDTQRAAA---AALMMSEDLHKFGRSRLERNDFSLNSPVMVNPASR 359

Query: 461  QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNP 282
            QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL+KGNP
Sbjct: 360  QIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNP 419

Query: 281  HFVCDARVLVKPYKEKGKIPDRKQQQQLVERSDFPPSTTLSGHDNRDPYDLQVMQMQSSP 102
            HFVCDARVLVKPYKEKGK+PD+KQQQQ V+R DF P  T +G D RD +DLQ+       
Sbjct: 420  HFVCDARVLVKPYKEKGKVPDKKQQQQ-VDRGDFSPCGTPTGLDARDQFDLQL-----GG 473

Query: 101  RLLYNT 84
            R+LYNT
Sbjct: 474  RMLYNT 479



 Score =  108 bits (269), Expect = 6e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -1

Query: 1487 MDAYEATRIVFSRIQNIDPENASKIMGFLLIQDHGDKEMIRLAFGPETLIHSLIIKAYNE 1308
            MD YEATRIVFSRIQN+DPENASKIMG LL+QDHG+KEMIRLAFGPE L+HS+I+KA  E
Sbjct: 1    MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60

Query: 1307 LG 1302
            LG
Sbjct: 61   LG 62


>ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
            [Glycine max]
          Length = 698

 Score =  379 bits (973), Expect = e-102
 Identities = 213/361 (59%), Positives = 247/361 (68%), Gaps = 11/361 (3%)
 Frame = -1

Query: 1133 NNHTEFIDELHLQDQLAFLNDAS------PKNPDLFYPS-SELATSPSDSATDGMLFNSY 975
            N  ++ IDE  LQDQL+FLND S        NPDLFYP+ S+ ++SP+ +A D  LF SY
Sbjct: 138  NGGSDPIDEFQLQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPT-TAADPTLFPSY 196

Query: 974  SPNWGVNNEQHRRSLSVTDIGLGGSDP---FGWKPCLYYARGYCKNGTSCRFLHAPPDSP 804
               WG     HRRS SV D  LG  DP    GWKPCLY+ARGYCKNGTSCRFLH      
Sbjct: 197  G--WG--GSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDA 252

Query: 803  DSTTNVGSPGKLDIMEQCQELLLRSKSXXXXXXXXXXQRXXXXXXXXXXXXXXXXXAKCP 624
            D+   VGSP K+++MEQC ELL RSKS           +                  KC 
Sbjct: 253  DAAM-VGSPSKIEMMEQCHELL-RSKSAQQ--------QRLAAASQLMSSSTFPYSPKCM 302

Query: 623  NFLMQQQQNDTRXXXXXXAGLMLGGEDLHQYGRSRIDKNDFASITAGMVNPASRQIYLTF 444
            NFL+QQQQNDT+         ++  EDLH++GRSR+++NDF+  + GMVNPASRQIYLTF
Sbjct: 303  NFLLQQQQNDTQRAAA---AALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTF 359

Query: 443  PADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDA 264
            PADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLIL+KGNPHFVCDA
Sbjct: 360  PADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDA 419

Query: 263  RVLVKPYKEKGKIPDRKQQQQLVERSDFPPSTTLSGHDNRD-PYDLQVMQMQSSPRLLYN 87
            RVLVKPYKEKGK+PD+K QQQ V+R DF P  T +G D RD  +DLQ+       R+ YN
Sbjct: 420  RVLVKPYKEKGKVPDKKLQQQQVDRGDFSPCGTPTGLDARDHQFDLQL-----GSRMFYN 474

Query: 86   T 84
            T
Sbjct: 475  T 475



 Score =  104 bits (260), Expect = 7e-20
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = -1

Query: 1487 MDAYEATRIVFSRIQNIDPENASKIMGFLLIQDHGDKEMIRLAFGPETLIHSLIIKAYNE 1308
            MD+YEATRIVFSRIQN+D ENASKIMG LL+QDHG+KEMIRLAFGPE L+HS+I+KA  +
Sbjct: 1    MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKD 60

Query: 1307 LG 1302
            LG
Sbjct: 61   LG 62


>ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|222841330|gb|EEE78877.1|
            predicted protein [Populus trichocarpa]
          Length = 680

 Score =  375 bits (962), Expect = e-101
 Identities = 208/364 (57%), Positives = 249/364 (68%), Gaps = 10/364 (2%)
 Frame = -1

Query: 1145 NRVKNNHTEFIDELHLQDQLAFLNDAS----PKNPDLFYPSSELATSPSDSATDGMLFNS 978
            N V+   ++ +DE  LQDQL+FLND S    PK+ DLFYP  +  +SP+  A+D M+F S
Sbjct: 122  NGVRGGESDLMDEFQLQDQLSFLNDNSQNLGPKSSDLFYPQLDALSSPT-GASDSMMFPS 180

Query: 977  YSPNWGVNNEQHRRSLSVTDIGLGGSDP---FGWKPCLYYARGYCKNGTSCRFLHAPPDS 807
            Y   WG     HRRS SV+D+ LG  DP   FGW+PCLY+ARGYCKNG++CRF+H     
Sbjct: 181  Y---WG--GSVHRRSCSVSDV-LGSEDPNSGFGWRPCLYFARGYCKNGSNCRFVHGGLGE 234

Query: 806  PDSTTNVGSPG---KLDIMEQCQELLLRSKSXXXXXXXXXXQRXXXXXXXXXXXXXXXXX 636
             D    VGSP    K+D+M+QC ELL RSKS          Q                  
Sbjct: 235  LDGAGVVGSPNSNNKIDMMDQCHELL-RSKSAHQQRLAAASQ------LMSSSAASFPYS 287

Query: 635  AKCPNFLMQQQQNDTRXXXXXXAGLMLGGEDLHQYGRSRIDKNDFASITAGMVNPASRQI 456
             K  NFL+QQQQND++         ++ GED+H++GRSR+D+ND       +VNPASRQI
Sbjct: 288  PKSMNFLLQQQQNDSQRAAATA---LMMGEDMHKFGRSRLDRND-------LVNPASRQI 337

Query: 455  YLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHF 276
            YLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF
Sbjct: 338  YLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHF 397

Query: 275  VCDARVLVKPYKEKGKIPDRKQQQQLVERSDFPPSTTLSGHDNRDPYDLQVMQMQSSPRL 96
            VCDARVLVKPYKEKGK+PD+KQQQQ VER +F P  T +G D+RDP+DLQ+       R+
Sbjct: 398  VCDARVLVKPYKEKGKVPDKKQQQQQVERGEFSPCGTPTGLDSRDPFDLQL-----GARM 452

Query: 95   LYNT 84
             YNT
Sbjct: 453  FYNT 456



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 1412 MGFLLIQDHGDKEMIRLAFGPETLIHSLIIKAYNELG 1302
            MG LLIQDHG+KEMIRLAFGPE L+HS+I+KA  ELG
Sbjct: 1    MGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKELG 37