BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001111
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29961.3| unnamed protein product [Vitis vinifera]              218   1e-54
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   218   1e-54
ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2...   214   3e-53
ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...   211   2e-52
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   209   6e-52

>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  218 bits (556), Expect = 1e-54
 Identities = 127/229 (55%), Positives = 152/229 (66%), Gaps = 28/229 (12%)
 Frame = -2

Query: 853  GNVKELLYQGVSDSRFRGKTRKQEIMERRRQMPYHMHINLELLDAVHLICAMLLEVPNMA 674
            G VKELL QGVS SR+  KT +QE +ERRRQMPYHMHINLELL+ VHLICAMLLEVPNMA
Sbjct: 512  GRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMA 571

Query: 673  VTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSKGDFQTSFNVIQSF 494
                DAK KVISKTFR+LLE S+R  FT   ENVRD +M A+ ALSKGDFQ +F+VI+S 
Sbjct: 572  ANTHDAKRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSL 631

Query: 493  GFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQLTPTLKTYPKITQHSL 314
             FW  L +R+ DVLEML++KIKEEA+R   FTYS  Y++ S+DQLT        +T HS+
Sbjct: 632  DFWKLLRNRE-DVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLT-HSI 689

Query: 313  ----------------------------TQLPALTSHLTKMLSILAESN 251
                                        T+L AL+  LT  L+ILAE+N
Sbjct: 690  ISKMMVMEELHASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENN 738


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Vitis vinifera]
          Length = 946

 Score =  218 bits (556), Expect = 1e-54
 Identities = 127/229 (55%), Positives = 152/229 (66%), Gaps = 28/229 (12%)
 Frame = -2

Query: 853  GNVKELLYQGVSDSRFRGKTRKQEIMERRRQMPYHMHINLELLDAVHLICAMLLEVPNMA 674
            G VKELL QGVS SR+  KT +QE +ERRRQMPYHMHINLELL+ VHLICAMLLEVPNMA
Sbjct: 592  GRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMA 651

Query: 673  VTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSKGDFQTSFNVIQSF 494
                DAK KVISKTFR+LLE S+R  FT   ENVRD +M A+ ALSKGDFQ +F+VI+S 
Sbjct: 652  ANTHDAKRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSL 711

Query: 493  GFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQLTPTLKTYPKITQHSL 314
             FW  L +R+ DVLEML++KIKEEA+R   FTYS  Y++ S+DQLT        +T HS+
Sbjct: 712  DFWKLLRNRE-DVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLT-HSI 769

Query: 313  ----------------------------TQLPALTSHLTKMLSILAESN 251
                                        T+L AL+  LT  L+ILAE+N
Sbjct: 770  ISKMMVMEELHASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENN 818


>ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1|
            predicted protein [Populus trichocarpa]
          Length = 895

 Score =  214 bits (544), Expect = 3e-53
 Identities = 125/228 (54%), Positives = 148/228 (64%), Gaps = 27/228 (11%)
 Frame = -2

Query: 853  GNVKELLYQGVSDSRFRGKTRKQEIMERRRQMPYHMHINLELLDAVHLICAMLLEVPNMA 674
            G VKELL QGVS SR+  KT++QE +ERRRQMPYHMHINLELL++VHLICAMLLEVPNMA
Sbjct: 564  GRVKELLAQGVSQSRYHEKTQEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNMA 623

Query: 673  VTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSKGDFQTSFNVIQSF 494
              + DAK KVISKTFR+LLE ++R  FT   ENVRD +M A+ AL+KGDFQ +F+VI S 
Sbjct: 624  ANIYDAKRKVISKTFRRLLEVTERQTFTGPPENVRDHVMAATRALTKGDFQKAFDVINSL 683

Query: 493  GFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQLTPTLKTYPKITQ--- 323
              W  L DRD  VLEMLK+KIKEEA+R   F+YS  Y S  +D L+      P  TQ   
Sbjct: 684  DVWKLLRDRDG-VLEMLKAKIKEEALRTHLFSYSSSYDSVGLDLLSKMFDLSPIQTQIIV 742

Query: 322  ---------HS---------------LTQLPALTSHLTKMLSILAESN 251
                     H+                T+L AL   LT+ LSIL ESN
Sbjct: 743  SKMMINEELHASWDQPTQCIVFYDIERTRLQALAFQLTEKLSILVESN 790


>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 925

 Score =  211 bits (536), Expect = 2e-52
 Identities = 122/230 (53%), Positives = 151/230 (65%), Gaps = 27/230 (11%)
 Frame = -2

Query: 853  GNVKELLYQGVSDSRFRGKTRKQEIMERRRQMPYHMHINLELLDAVHLICAMLLEVPNMA 674
            G VKELL QGVS SR+  KT +QE +ERRRQMPYHMHINLELL+AVHL+ AMLLEVPNMA
Sbjct: 584  GRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMA 643

Query: 673  VTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSKGDFQTSFNVIQSF 494
              V DAK KVISKTFR+LLE S++  FT   ENVRD +M A+  L+KGDFQ +F++I S 
Sbjct: 644  ANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRVLNKGDFQKAFDIIVSL 703

Query: 493  GFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQLT-----PTLKTYPKI 329
              W F+ +RD  VLEMLK KIKEEA+R   FT+S  Y S S+DQLT        +T+  +
Sbjct: 704  DVWKFVRNRDT-VLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLTKFFDLSVCRTHSIV 762

Query: 328  TQHSL----------------------TQLPALTSHLTKMLSILAESNLK 245
            ++  +                      ++L AL   LT+ LS+LAESN K
Sbjct: 763  SRMMINEELHASWDQPTGCILFQDVEHSRLQALAFQLTEKLSVLAESNEK 812


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  209 bits (532), Expect = 6e-52
 Identities = 122/230 (53%), Positives = 150/230 (65%), Gaps = 27/230 (11%)
 Frame = -2

Query: 853  GNVKELLYQGVSDSRFRGKTRKQEIMERRRQMPYHMHINLELLDAVHLICAMLLEVPNMA 674
            G VKELL QGVS SR+  KT +QE +ERRRQMPYHMHINLELL+AVHL+ AMLLEVPNMA
Sbjct: 585  GRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMA 644

Query: 673  VTVGDAKGKVISKTFRKLLEESQRPNFTPSRENVRDCIMVASSALSKGDFQTSFNVIQSF 494
              V DAK KVISKTFR+LLE S++  FT   ENVRD +M A+  L KGDFQ +F++I S 
Sbjct: 645  ANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRILRKGDFQKAFDIIVSL 704

Query: 493  GFWSFLGDRDNDVLEMLKSKIKEEAMRICQFTYSPCYSSASVDQLT-----PTLKTYPKI 329
              W F+ +RD  VLEMLK KIKEEA+R   FT+S  Y S S+DQLT        +T+  +
Sbjct: 705  DVWKFVRNRDT-VLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLTKFFDLSVSRTHSIV 763

Query: 328  TQHSL----------------------TQLPALTSHLTKMLSILAESNLK 245
            ++  +                      ++L AL   LT+ LS+LAESN K
Sbjct: 764  SRMMINEELHASWDQPTGCILFQDVEHSRLQALVFQLTEKLSVLAESNEK 813