BLASTX nr result

ID: Coptis23_contig00001102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001102
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|AEZ53108.1| aromatic prenyltransferase, partial [Epimedium ac...   115   6e-24
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   113   3e-23
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   111   1e-22
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   108   6e-22

>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  119 bits (299), Expect = 3e-25
 Identities = 74/210 (35%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
 Frame = +1

Query: 13  DMENKPDLLIASGDVSMDVGATS------------------------------GATGSFL 102
           D  NKP L +ASGD SM  G                                 G+  S  
Sbjct: 68  DKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVLGSVYSIE 127

Query: 103 LPFVMKWKKHPYFGA-CAMPVRDLLIHLAFFVHIQKYVLGKPILFTRSLXXXXXXXXXXX 279
           LPF ++WKK  +  A C M VR +++ LAFFVH+QK+VLGK  + TRSL           
Sbjct: 128 LPF-LRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLVFATAFMCFFS 186

Query: 280 XXXXXXKDMADANGNHNLDCQSCGVQLGQGKVLPVSINMLLMAYGTTIIAGAFPPYTFTK 459
                 KD+ D +G+ +   QS  V LGQ +V  + +NMLL+AYG  ++ GA   +  +K
Sbjct: 187 AVIALFKDIPDVDGDRDYGIQSFSVSLGQERVFWLCVNMLLIAYGAAVVVGASSTFLPSK 246

Query: 460 LVNVLGHSMLASMLWFRARSIGICFHN*VT 549
            + +LGH  LA +LW RARS+ +   + +T
Sbjct: 247 FITILGHCTLAFILWLRARSVDLTSKDSIT 276


>gb|AEZ53108.1| aromatic prenyltransferase, partial [Epimedium acuminatum]
          Length = 239

 Score =  115 bits (288), Expect = 6e-24
 Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 31/203 (15%)
 Frame = +1

Query: 13  DMENKPDLLIASGDVSMDVGA--------TSGATG----------------------SFL 102
           D ENKPDL +ASG+ S  +G         TS A G                      S  
Sbjct: 2   DKENKPDLPLASGEFSPTLGTAIVAISPITSFAMGIMFKSPPLLYSILTVFLLATAYSLH 61

Query: 103 LPFVMKWKKHPYF-GACAMPVRDLLIHLAFFVHIQKYVLGKPILFTRSLXXXXXXXXXXX 279
           LPF ++WKK       C + VR L+I L FF+H+QKYVLG+P + T+ +           
Sbjct: 62  LPF-LRWKKSAVLTSVCIISVRALVIPLGFFLHMQKYVLGRPAIITKPVMFAVAFMAIIS 120

Query: 280 XXXXXXKDMADANGNHNLDCQSCGVQLGQGKVLPVSINMLLMAYGTTIIAGAFPPYTFTK 459
                 KD+ D +G+     QS  ++LG+ KV  + ++ LLMAYGT +I GA       K
Sbjct: 121 TVIAVIKDIPDVDGDEAFGLQSLTIRLGKEKVFWLGVSTLLMAYGTAVIVGASSTLMSNK 180

Query: 460 LVNVLGHSMLASMLWFRARSIGI 528
           ++ VLGH +LAS+LW RAR++ I
Sbjct: 181 IITVLGHCILASILWTRARTVVI 203


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  113 bits (282), Expect = 3e-23
 Identities = 73/212 (34%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
 Frame = +1

Query: 13  DMENKPDLLIASGDVSMDVGA------------------------------TSGATGSFL 102
           D  NKP L +ASG  SM  G                                 G+  S  
Sbjct: 180 DKVNKPYLPLASGKFSMATGILIVSASLLLSLYMGITFQSPPLLAALLISFALGSVYSIE 239

Query: 103 LPFVMKWKKHPYFGA-CAMPVRDLLIHLAFFVHIQKYVLGKPILFTRSLXXXXXXXXXXX 279
           LPF ++WKKH +  A C + VR +++ LAFFVHIQK+VLGK I   RSL           
Sbjct: 240 LPF-LRWKKHAFLAASCILIVRAMVVQLAFFVHIQKFVLGKSIFIPRSLMFATAFMCFFS 298

Query: 280 XXXXXXKDMADANGNHNLDCQSCGVQLGQGKVLPVSINMLLMAYGTTIIAGAFPPYTF-- 453
                 KD+ D  G+ +   QS  V LGQ +VL + +NMLL+AYG  ++ GA  P +   
Sbjct: 299 AAIALFKDIPDVEGDRDYGIQSFSVSLGQERVLWLCVNMLLVAYGAAVVHGASSPSSLLP 358

Query: 454 TKLVNVLGHSMLASMLWFRARSIGICFHN*VT 549
            KL+ ++GHS +A +LW +A+ + +     +T
Sbjct: 359 VKLITMIGHSTIAWILWMKAQFVDLTSQKSIT 390


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  111 bits (277), Expect = 1e-22
 Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 31/203 (15%)
 Frame = +1

Query: 13  DMENKPDLLIASGDVSMDVGATS------------------------------GATGSFL 102
           D  NKP+L +ASG+ SM +G                                 G+  S  
Sbjct: 172 DKVNKPNLPLASGEYSMGLGKAIVSAFGLMSFAMGIVFQSPPVFFALLICFLFGSAYSVE 231

Query: 103 LPFVMKWKKHPYFGACA-MPVRDLLIHLAFFVHIQKYVLGKPILFTRSLXXXXXXXXXXX 279
           LP +++WK++ +  A + + VR + ++LAFF HIQKYVLG+P++F RSL           
Sbjct: 232 LP-LLRWKRNAFLAAFSILMVRAITVNLAFFYHIQKYVLGRPMVFPRSLCFATVCISMFT 290

Query: 280 XXXXXXKDMADANGNHNLDCQSCGVQLGQGKVLPVSINMLLMAYGTTIIAGAFPPYTFTK 459
                 KD+ D +G+ +   QS  V LGQ +V  + I +LL+AY + ++ GA   +  +K
Sbjct: 291 TVIALFKDIPDVDGDRDFGIQSFSVCLGQKRVFWLCIGILLIAYASALVIGASSSFLLSK 350

Query: 460 LVNVLGHSMLASMLWFRARSIGI 528
           LV V+GH  LAS+LW RA S+ +
Sbjct: 351 LVTVIGHCTLASILWRRANSVNL 373


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  108 bits (271), Expect = 6e-22
 Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
 Frame = +1

Query: 13  DMENKPDLLIASGDVSMDVGATS------------------------------GATGSFL 102
           D  NKP+L +ASGD SM+ G+                                G   S  
Sbjct: 168 DKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLISFLLGTAYSIE 227

Query: 103 LPFVMKWKKHPYFGA-CAMPVRDLLIHLAFFVHIQKYVLGKPILFTRSLXXXXXXXXXXX 279
           +P +++WK++P   A C + VR +++ LAFF HIQK+VLG+ I++T+S+           
Sbjct: 228 IP-LLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVVFGVAFMCFFS 286

Query: 280 XXXXXXKDMADANGNHNLDCQSCGVQLGQGKVLPVSINMLLMAYGTTIIAGAFPPYTFTK 459
                 KD+ D +G+     QS  V+LGQ KV  + +NMLLMAYG   + GA       K
Sbjct: 287 TVIALFKDIPDVDGDREFGIQSFTVKLGQKKVFWLCVNMLLMAYGAATVIGASSSSMPIK 346

Query: 460 LVNVLGHSMLASMLWFRARSIGICFHN*VT 549
              V  H  LA +LW RA+S+ +     VT
Sbjct: 347 FATVFCHCALALVLWVRAQSVDLSSKEAVT 376


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