BLASTX nr result

ID: Coptis23_contig00001095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001095
         (1919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vini...   338   4e-90
emb|CBI20569.3| unnamed protein product [Vitis vinifera]              338   4e-90
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...   320   6e-85
ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...   313   1e-82
ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus c...   308   3e-81

>ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vinifera]
          Length = 543

 Score =  338 bits (866), Expect = 4e-90
 Identities = 184/363 (50%), Positives = 236/363 (65%), Gaps = 5/363 (1%)
 Frame = +2

Query: 128  PCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDASHSEYACSEDEIN-SEH 304
            P  EVQII+EDLPLRTPRDAFG+LA L+N  + S  H    + SH++     D+ + SE 
Sbjct: 185  PYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHTSQSNTSHAKRPRYGDKDSASES 244

Query: 305  ISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVCELGHKLKRSCTQNFGG 484
             SE SF+ +L+  E++MH SA+ SC               +FVCE   +L RS      G
Sbjct: 245  NSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSDDDKFVCESELQLGRSHLNEPIG 304

Query: 485  SSGKNCNGRIRNDYSGIHH----GYQPVVGRKPEVGERWKAWVAAESKLSCRASRSFWPH 652
            S   +C  R +    GI +    G Q   G+  + G+     +  +   S    R+FWP+
Sbjct: 305  SMHLDCERRNKKANLGIRNKSISGSQSCKGKGLKEGQ-----MVTKLNQSYGVPRAFWPY 359

Query: 653  WVYRMYDSYGLAQRAAVKWKQIIGAPSLDGLAKKPDILSFYIASRIPITESLKQELLEID 832
            WVYRMYDSY LAQRAA  WKQI+GAPS+D L KKPD+LSF+I S+IP++ES++QELLEID
Sbjct: 360  WVYRMYDSYHLAQRAAGMWKQIVGAPSMDELVKKPDLLSFHIGSKIPLSESIRQELLEID 419

Query: 833  GVSYRLRREIELLECMDFVRCKTCQSVIAKRSEMLVMSRDGPLGVSMDLNCYVPQIMTFY 1012
            G SYRLRREIELLE  D +RCK CQ+VIAKRS+ML+MS +GPLG  ++   YV +IMT Y
Sbjct: 420  GTSYRLRREIELLESFDRIRCKNCQTVIAKRSDMLMMSSEGPLGAYVNPGGYVHEIMTLY 479

Query: 1013 KANGLALLGCPSEECSWFLGYAWTKSTCNACTSVMGWYFTAINETLKPESFWAIWIAQIA 1192
            KANGLAL G P +E SWF GYAWT S C  C + MGW FTA N+ LKP  FW I  +Q+A
Sbjct: 480  KANGLALTGRPIKEYSWFPGYAWTISNCATCETQMGWLFTATNKKLKPSLFWGIRSSQVA 539

Query: 1193 ENI 1201
            +++
Sbjct: 540  DDM 542


>emb|CBI20569.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  338 bits (866), Expect = 4e-90
 Identities = 184/363 (50%), Positives = 236/363 (65%), Gaps = 5/363 (1%)
 Frame = +2

Query: 128  PCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDASHSEYACSEDEIN-SEH 304
            P  EVQII+EDLPLRTPRDAFG+LA L+N  + S  H    + SH++     D+ + SE 
Sbjct: 190  PYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHTSQSNTSHAKRPRYGDKDSASES 249

Query: 305  ISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVCELGHKLKRSCTQNFGG 484
             SE SF+ +L+  E++MH SA+ SC               +FVCE   +L RS      G
Sbjct: 250  NSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSDDDKFVCESELQLGRSHLNEPIG 309

Query: 485  SSGKNCNGRIRNDYSGIHH----GYQPVVGRKPEVGERWKAWVAAESKLSCRASRSFWPH 652
            S   +C  R +    GI +    G Q   G+  + G+     +  +   S    R+FWP+
Sbjct: 310  SMHLDCERRNKKANLGIRNKSISGSQSCKGKGLKEGQ-----MVTKLNQSYGVPRAFWPY 364

Query: 653  WVYRMYDSYGLAQRAAVKWKQIIGAPSLDGLAKKPDILSFYIASRIPITESLKQELLEID 832
            WVYRMYDSY LAQRAA  WKQI+GAPS+D L KKPD+LSF+I S+IP++ES++QELLEID
Sbjct: 365  WVYRMYDSYHLAQRAAGMWKQIVGAPSMDELVKKPDLLSFHIGSKIPLSESIRQELLEID 424

Query: 833  GVSYRLRREIELLECMDFVRCKTCQSVIAKRSEMLVMSRDGPLGVSMDLNCYVPQIMTFY 1012
            G SYRLRREIELLE  D +RCK CQ+VIAKRS+ML+MS +GPLG  ++   YV +IMT Y
Sbjct: 425  GTSYRLRREIELLESFDRIRCKNCQTVIAKRSDMLMMSSEGPLGAYVNPGGYVHEIMTLY 484

Query: 1013 KANGLALLGCPSEECSWFLGYAWTKSTCNACTSVMGWYFTAINETLKPESFWAIWIAQIA 1192
            KANGLAL G P +E SWF GYAWT S C  C + MGW FTA N+ LKP  FW I  +Q+A
Sbjct: 485  KANGLALTGRPIKEYSWFPGYAWTISNCATCETQMGWLFTATNKKLKPSLFWGIRSSQVA 544

Query: 1193 ENI 1201
            +++
Sbjct: 545  DDM 547


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
            predicted protein [Populus trichocarpa]
          Length = 549

 Score =  320 bits (821), Expect = 6e-85
 Identities = 173/361 (47%), Positives = 232/361 (64%), Gaps = 4/361 (1%)
 Frame = +2

Query: 128  PCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDASHSEYACSEDEINSEHI 307
            PC EVQII+ED+PLRTP+DAFG+LA L+N  +   S +VLP   +        + +SE  
Sbjct: 179  PCGEVQIIQEDIPLRTPKDAFGKLAPLSNLRSHRLS-RVLPSLGYGH-----SDNDSEAN 232

Query: 308  SETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVCELGHKLKRSCTQNFGG- 484
            S+ SFE+ L+   ++ H SA+ SC               +F+ +   +  RS      G 
Sbjct: 233  SDDSFENALSSAGMRTHQSALDSCYGYDVMDESTSSDDDKFLSQTEMRSTRSHLNESKGP 292

Query: 485  ---SSGKNCNGRIRNDYSGIHHGYQPVVGRKPEVGERWKAWVAAESKLSCRASRSFWPHW 655
                +GKN       D + +  G    + +K E  +R   W   +     R  R+FWPHW
Sbjct: 293  LYSDTGKNA------DNTTLEIGNSSDLAKKGEGSKR--CWKNTDLNHFHRVPRAFWPHW 344

Query: 656  VYRMYDSYGLAQRAAVKWKQIIGAPSLDGLAKKPDILSFYIASRIPITESLKQELLEIDG 835
            VYRMYDSY LA+RAA  WKQI+GAPS+DGL +KPD+LSFYIAS+IP++E  +QELLEIDG
Sbjct: 345  VYRMYDSYCLAERAADMWKQIVGAPSMDGLVRKPDLLSFYIASKIPVSEETRQELLEIDG 404

Query: 836  VSYRLRREIELLECMDFVRCKTCQSVIAKRSEMLVMSRDGPLGVSMDLNCYVPQIMTFYK 1015
            +SYRLRREI LLE  D V+CKTC++VIA+RS+MLVMS +GPLG  ++ + YV +IMT  K
Sbjct: 405  ISYRLRREIGLLESFDLVQCKTCKTVIAQRSDMLVMSTEGPLGAYVNSHGYVHEIMTLQK 464

Query: 1016 ANGLALLGCPSEECSWFLGYAWTKSTCNACTSVMGWYFTAINETLKPESFWAIWIAQIAE 1195
            ANGLAL+G  + E SWF GYAWT + C +C + MGW FTA  + LKP+SFW I  +Q+A+
Sbjct: 465  ANGLALIGRATVEYSWFPGYAWTIAECASCETQMGWLFTATKKKLKPQSFWGIRSSQVAD 524

Query: 1196 N 1198
            +
Sbjct: 525  D 525


>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
            predicted protein [Populus trichocarpa]
          Length = 542

 Score =  313 bits (801), Expect = 1e-82
 Identities = 173/360 (48%), Positives = 229/360 (63%), Gaps = 5/360 (1%)
 Frame = +2

Query: 128  PCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDASHSEYACSEDEINSEHI 307
            PC EVQII+ED+PLRTP+DAFG+LA L+N  +   S  VLP ++ S       + +SE  
Sbjct: 189  PCGEVQIIQEDMPLRTPKDAFGKLAPLSNLRSHKFS-SVLP-STFSSVGYGHSDNDSEAN 246

Query: 308  SETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVCELGH-KLKRSCTQNFGG 484
            SE SFE +L+  E ++H SA+ SC               +F+      + +RS      G
Sbjct: 247  SEESFETELSLAERRIHQSALNSCYGYDMMDESMSSDDDKFMSRSEEMRSRRSHLSETEG 306

Query: 485  S----SGKNCNGRIRNDYSGIHHGYQPVVGRKPEVGERWKAWVAAESKLSCRASRSFWPH 652
            S    +GKN         + +  G    + +K E  +R   W   +     R  R+FWP+
Sbjct: 307  SLYLDTGKNLGN------TTLEIGNSSGLVKKGEGSKR--CWKNTDLNQFRRVPRTFWPY 358

Query: 653  WVYRMYDSYGLAQRAAVKWKQIIGAPSLDGLAKKPDILSFYIASRIPITESLKQELLEID 832
            WVY MYDSY LA++AA  WKQI+GAPS+DGL +KPD+LSFYIAS+IP++E  +QELLEID
Sbjct: 359  WVYSMYDSYCLAEKAADMWKQIVGAPSMDGLVRKPDLLSFYIASKIPVSEETRQELLEID 418

Query: 833  GVSYRLRREIELLECMDFVRCKTCQSVIAKRSEMLVMSRDGPLGVSMDLNCYVPQIMTFY 1012
            G+SYRLRREI+LLE  D VRCKTC+ VI++RS+MLVMS +GPLG  ++   YV +IMT  
Sbjct: 419  GISYRLRREIDLLETFDLVRCKTCKIVISRRSDMLVMSSEGPLGAYVNPLGYVHEIMTLQ 478

Query: 1013 KANGLALLGCPSEECSWFLGYAWTKSTCNACTSVMGWYFTAINETLKPESFWAIWIAQIA 1192
            KANGLAL+G  + E SWF GYAWT + C +C   MGW FTA  + LKP+SFW I  +Q+A
Sbjct: 479  KANGLALIGRATAEYSWFPGYAWTVAECASCEIQMGWLFTATKKKLKPQSFWGIRSSQVA 538


>ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus communis]
            gi|223544347|gb|EEF45868.1| ATP-dependent peptidase,
            putative [Ricinus communis]
          Length = 550

 Score =  308 bits (790), Expect = 3e-81
 Identities = 171/364 (46%), Positives = 231/364 (63%), Gaps = 7/364 (1%)
 Frame = +2

Query: 128  PCAEVQIIEEDLPLRTPRDAFGQLASLANFGNSSSSHQVLPDASH------SEYACSEDE 289
            PC +VQII+EDLPLR+P+ AFG++  L    + + S  V   AS+      S  A  +D+
Sbjct: 188  PCGKVQIIQEDLPLRSPQGAFGKIKPLRTLDSRNVSDAVPSSASYTVPSNISSDAHGDDD 247

Query: 290  INSEHISETSFEDDLTPMELQMHHSAMKSCKRXXXXXXXXXXXXXQFVCELGHKLKRSCT 469
             +SE  SE SFE +L+P E ++H SA+ SC               +F  ++  K+ RS  
Sbjct: 248  NDSEANSEESFESELSPAERRIHQSAISSCCSHDMMDDLASSDDGKFDSQI--KVTRSHL 305

Query: 470  QNFGGSSGKNCNGRIRNDYSGIHHGYQPVVGRKPEVGERWKA-WVAAESKLSCRASRSFW 646
             +   +   + N     D + +   Y     ++   GE  K+ W   +     R   +FW
Sbjct: 306  ADSDSNESLHLNHEREMDKTVLATVYF-TPKKQCHKGEGSKSCWKNTDLSQFRRVPTAFW 364

Query: 647  PHWVYRMYDSYGLAQRAAVKWKQIIGAPSLDGLAKKPDILSFYIASRIPITESLKQELLE 826
            P WVYRMYDSY LA+RAA  W+QI+GAP++D L KKPD+LSFYIAS+IP++ES +QELLE
Sbjct: 365  PFWVYRMYDSYCLAERAADMWRQIVGAPNVDSLVKKPDLLSFYIASKIPVSESTRQELLE 424

Query: 827  IDGVSYRLRREIELLECMDFVRCKTCQSVIAKRSEMLVMSRDGPLGVSMDLNCYVPQIMT 1006
            IDG+SYRL REI+LL+  D VRCK CQSVIA+RS+MLVMS +GPLG  ++ + +V +IMT
Sbjct: 425  IDGISYRLHREIDLLKSFDLVRCKKCQSVIARRSDMLVMSSEGPLGAYVNPHGFVHEIMT 484

Query: 1007 FYKANGLALLGCPSEECSWFLGYAWTKSTCNACTSVMGWYFTAINETLKPESFWAIWIAQ 1186
            FYKAN LAL G   +E SWF GYAWT ++C  C S MGW FTA  + L+P SFWAI  AQ
Sbjct: 485  FYKANDLALHGRAVKEYSWFPGYAWTITSCANCESQMGWLFTATKKKLQPRSFWAIRSAQ 544

Query: 1187 IAEN 1198
            +A++
Sbjct: 545  VADD 548


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