BLASTX nr result

ID: Coptis23_contig00001089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001089
         (2526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135902.1| PREDICTED: citrate synthase, mitochondrial-l...   488   e-135
gb|AAL11504.1|AF367444_1 citrate synthase [Prunus persica]            487   e-135
gb|AEE60890.1| citrate synthase [Paeonia suffruticosa]                486   e-134
ref|XP_002271451.1| PREDICTED: citrate synthase, mitochondrial [...   483   e-134
gb|AAR88248.1| mitochondrial citrate synthase precursor [Citrus ...   483   e-133

>ref|XP_004135902.1| PREDICTED: citrate synthase, mitochondrial-like [Cucumis sativus]
            gi|449524948|ref|XP_004169483.1| PREDICTED: citrate
            synthase, mitochondrial-like [Cucumis sativus]
          Length = 471

 Score =  488 bits (1256), Expect = e-135
 Identities = 235/312 (75%), Positives = 271/312 (86%)
 Frame = +3

Query: 240  MVFFRTVCALSNLRSRIAQQSTFNTSVRWLQMQSSSELDLKSQLKEMIPEQQERLKKLKA 419
            M FF+++ ALS LRSR+ QQS  + SVRWLQMQSSS+LDL+S L+E+IPEQQ+RLKK KA
Sbjct: 1    MAFFKSLTALSKLRSRVGQQSNLSNSVRWLQMQSSSDLDLQSHLRELIPEQQDRLKKFKA 60

Query: 420  EHGKVELGNTTVDMVIGGMRGITAMLWETSLLDPNEGIRFRGLSLPECQKVXXXXXXXXX 599
            EHGKV+LGN TVDMV+GGMRG+T +LWETSLLDP+EGIRFRGLS+PECQK+         
Sbjct: 61   EHGKVQLGNITVDMVLGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDGE 120

Query: 600  XXXXXXXXXXMTGKVPTKDQVDALSKELQQRSTVPDYVYKAIEALPVTAHPMTQFTTGVM 779
                      +TGKVP+K+QVDALS+ELQ R+TVPDYVYKAI+ALP+T+HPMTQF TGVM
Sbjct: 121  PLPEGLLWLLLTGKVPSKEQVDALSRELQSRATVPDYVYKAIDALPITSHPMTQFATGVM 180

Query: 780  ALQVQSEFQKAYDNGIAKSKFWEPTYEDALNLIAQLPLVASFIYRRVYKGGNIIPVDESL 959
             LQVQSEFQKAY+ GI KSK+WEPTYED+LNLIAQ+PLVAS++YRR+YK G+IIP D+SL
Sbjct: 181  GLQVQSEFQKAYEKGIHKSKYWEPTYEDSLNLIAQVPLVASYVYRRIYKDGHIIPKDDSL 240

Query: 960  DYGANFSHTLGFDDPKMQELMRLYLTIHSDHEGGNVSAHTAHLVASALSDPYLSFAAALN 1139
            DYG NFSH LGFD P+MQELMRLY+TIHSDHEGGNVSAHT HLVASALSDPYLSFAAALN
Sbjct: 241  DYGGNFSHMLGFDSPQMQELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALN 300

Query: 1140 GLAGPLHGLANQ 1175
            GLAGPLHGLANQ
Sbjct: 301  GLAGPLHGLANQ 312


>gb|AAL11504.1|AF367444_1 citrate synthase [Prunus persica]
          Length = 473

 Score =  487 bits (1253), Expect = e-135
 Identities = 237/312 (75%), Positives = 272/312 (87%)
 Frame = +3

Query: 240  MVFFRTVCALSNLRSRIAQQSTFNTSVRWLQMQSSSELDLKSQLKEMIPEQQERLKKLKA 419
            MVFFR+V ALS LRSR+ QQS    SVRWLQ Q+S++LDL+SQLKE+IPEQQERLKK+KA
Sbjct: 1    MVFFRSVNALSKLRSRLGQQSNLRDSVRWLQTQTSTDLDLRSQLKELIPEQQERLKKIKA 60

Query: 420  EHGKVELGNTTVDMVIGGMRGITAMLWETSLLDPNEGIRFRGLSLPECQKVXXXXXXXXX 599
            E+GKV+LGN TVDMV+GGMRG+T +LWETSLLDP+EGIRFRGLS+PECQKV         
Sbjct: 61   EYGKVQLGNITVDMVLGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKVLPGAKPGGE 120

Query: 600  XXXXXXXXXXMTGKVPTKDQVDALSKELQQRSTVPDYVYKAIEALPVTAHPMTQFTTGVM 779
                      +TGKVP+K+QVDALS EL+ R+ VPDYVYKAI+ALP+TAHPMTQFTTGVM
Sbjct: 121  PLPEGLLWLLLTGKVPSKEQVDALSXELRSRAAVPDYVYKAIDALPITAHPMTQFTTGVM 180

Query: 780  ALQVQSEFQKAYDNGIAKSKFWEPTYEDALNLIAQLPLVASFIYRRVYKGGNIIPVDESL 959
            ALQVQSEFQKAYD GI KSK+WEPT+ED+L+LIAQLP+VAS++Y+R++K G +IPVD+SL
Sbjct: 181  ALQVQSEFQKAYDXGIYKSKYWEPTFEDSLSLIAQLPVVASYVYQRIFKDGKVIPVDDSL 240

Query: 960  DYGANFSHTLGFDDPKMQELMRLYLTIHSDHEGGNVSAHTAHLVASALSDPYLSFAAALN 1139
            DYGANFSH  GFDDPKM ELMRLY+TIHSDHEGGNVSAHT HLVASALSDPYLSFAAALN
Sbjct: 241  DYGANFSHLWGFDDPKMHELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALN 300

Query: 1140 GLAGPLHGLANQ 1175
            GLAGPLHGLANQ
Sbjct: 301  GLAGPLHGLANQ 312


>gb|AEE60890.1| citrate synthase [Paeonia suffruticosa]
          Length = 471

 Score =  486 bits (1250), Expect = e-134
 Identities = 237/312 (75%), Positives = 272/312 (87%)
 Frame = +3

Query: 240  MVFFRTVCALSNLRSRIAQQSTFNTSVRWLQMQSSSELDLKSQLKEMIPEQQERLKKLKA 419
            MVFFR++  LS LRSR AQQS+ N+SVRW Q+Q+SS+LDL SQLKE+IPEQQERLKKLK+
Sbjct: 1    MVFFRSLSLLSKLRSRGAQQSSLNSSVRWFQVQASSDLDLHSQLKELIPEQQERLKKLKS 60

Query: 420  EHGKVELGNTTVDMVIGGMRGITAMLWETSLLDPNEGIRFRGLSLPECQKVXXXXXXXXX 599
            EHGKV+LGN TVDMV+GGMRG+T +LWETSLLDP+EGIRFRGLS+PECQKV         
Sbjct: 61   EHGKVQLGNITVDMVLGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKVLPPAKPDGE 120

Query: 600  XXXXXXXXXXMTGKVPTKDQVDALSKELQQRSTVPDYVYKAIEALPVTAHPMTQFTTGVM 779
                      +TGKVP+K+QVDAL+K+L+ R++VPDYVYK I+ALP +AHPMTQF TGVM
Sbjct: 121  PLPEGLLWLLLTGKVPSKEQVDALTKDLRSRASVPDYVYKTIDALPDSAHPMTQFATGVM 180

Query: 780  ALQVQSEFQKAYDNGIAKSKFWEPTYEDALNLIAQLPLVASFIYRRVYKGGNIIPVDESL 959
            ALQVQSEFQKAY+ GI KSKFWEPTYED+LNLIA+LP+VAS+IYRR+YK G IIP+D+SL
Sbjct: 181  ALQVQSEFQKAYEKGIHKSKFWEPTYEDSLNLIARLPIVASYIYRRIYKDGQIIPLDDSL 240

Query: 960  DYGANFSHTLGFDDPKMQELMRLYLTIHSDHEGGNVSAHTAHLVASALSDPYLSFAAALN 1139
            DYG NFSH LGFD PKMQELMRLY+TIH+DHEGGNVSAHT HLVASALSDPYLSFAAALN
Sbjct: 241  DYGGNFSHMLGFDSPKMQELMRLYVTIHTDHEGGNVSAHTGHLVASALSDPYLSFAAALN 300

Query: 1140 GLAGPLHGLANQ 1175
            GLAGPLHGLANQ
Sbjct: 301  GLAGPLHGLANQ 312


>ref|XP_002271451.1| PREDICTED: citrate synthase, mitochondrial [Vitis vinifera]
            gi|297741211|emb|CBI32162.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  483 bits (1244), Expect = e-134
 Identities = 238/312 (76%), Positives = 270/312 (86%)
 Frame = +3

Query: 240  MVFFRTVCALSNLRSRIAQQSTFNTSVRWLQMQSSSELDLKSQLKEMIPEQQERLKKLKA 419
            MVFFR+V ALS LRSR+AQ S+ N SVRWLQ+Q+ S+LDL SQLKE+IPEQQERLKKLKA
Sbjct: 1    MVFFRSVSALSKLRSRLAQPSSLNGSVRWLQVQTCSDLDLHSQLKELIPEQQERLKKLKA 60

Query: 420  EHGKVELGNTTVDMVIGGMRGITAMLWETSLLDPNEGIRFRGLSLPECQKVXXXXXXXXX 599
            E GK++LGN TVDMV+GGMRG+T +LWETSLLDP+EGIRFRG+S+PECQKV         
Sbjct: 61   ECGKIQLGNITVDMVLGGMRGMTGLLWETSLLDPDEGIRFRGMSIPECQKVLPNATPGGE 120

Query: 600  XXXXXXXXXXMTGKVPTKDQVDALSKELQQRSTVPDYVYKAIEALPVTAHPMTQFTTGVM 779
                      +TGKVPTK QVDALSKEL  R+TVPD+VYKAI+ALP +AHPMTQF TGVM
Sbjct: 121  PLPEGLLWLLLTGKVPTKGQVDALSKELSTRATVPDHVYKAIDALPQSAHPMTQFATGVM 180

Query: 780  ALQVQSEFQKAYDNGIAKSKFWEPTYEDALNLIAQLPLVASFIYRRVYKGGNIIPVDESL 959
            ALQVQSEFQKAY+ GI KSK+WEPTYED+L+LIAQ+P+VA+++YRRVYK G IIP D+SL
Sbjct: 181  ALQVQSEFQKAYEKGIPKSKYWEPTYEDSLSLIAQVPVVAAYVYRRVYKNGQIIPKDDSL 240

Query: 960  DYGANFSHTLGFDDPKMQELMRLYLTIHSDHEGGNVSAHTAHLVASALSDPYLSFAAALN 1139
            DYGANFSH LGFD PKMQELMRLY+TIHSDHEGGNVSAHT HLVASAL+DPYLSFAAALN
Sbjct: 241  DYGANFSHMLGFDSPKMQELMRLYVTIHSDHEGGNVSAHTGHLVASALADPYLSFAAALN 300

Query: 1140 GLAGPLHGLANQ 1175
            GLAGPLHGLANQ
Sbjct: 301  GLAGPLHGLANQ 312


>gb|AAR88248.1| mitochondrial citrate synthase precursor [Citrus junos]
          Length = 464

 Score =  483 bits (1242), Expect = e-133
 Identities = 236/312 (75%), Positives = 269/312 (86%)
 Frame = +3

Query: 240  MVFFRTVCALSNLRSRIAQQSTFNTSVRWLQMQSSSELDLKSQLKEMIPEQQERLKKLKA 419
            M FFR+V ALS LRSR+ QQS  + SVRWLQMQSSS+LDL SQLKEMIPEQQERLKK+K+
Sbjct: 1    MAFFRSVTALSRLRSRVGQQSNLSNSVRWLQMQSSSDLDLHSQLKEMIPEQQERLKKVKS 60

Query: 420  EHGKVELGNTTVDMVIGGMRGITAMLWETSLLDPNEGIRFRGLSLPECQKVXXXXXXXXX 599
            E GK +LGN TVDMVIGGMRG+T +LWETSLLDP+EGIRFRGLS+PECQK+         
Sbjct: 61   ELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKPDGE 120

Query: 600  XXXXXXXXXXMTGKVPTKDQVDALSKELQQRSTVPDYVYKAIEALPVTAHPMTQFTTGVM 779
                      +TGKVP+K+QVD LSKEL+ R+TVPDYVYKAI+ALPVTAHPMTQF +GVM
Sbjct: 121  PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVM 180

Query: 780  ALQVQSEFQKAYDNGIAKSKFWEPTYEDALNLIAQLPLVASFIYRRVYKGGNIIPVDESL 959
            ALQVQSEFQ+AY+ GI KSK+WEPTYED+LNLIA++P+VA+++Y+R+YK G IIP D+SL
Sbjct: 181  ALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSL 240

Query: 960  DYGANFSHTLGFDDPKMQELMRLYLTIHSDHEGGNVSAHTAHLVASALSDPYLSFAAALN 1139
            DYG NFSH LGFDDPKM ELMRLY+TIHSDHEGGNVSAHT HLVASALSDPYLSFAAALN
Sbjct: 241  DYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALN 300

Query: 1140 GLAGPLHGLANQ 1175
            GLAGPLHGLANQ
Sbjct: 301  GLAGPLHGLANQ 312


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