BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001088
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...    67   2e-09
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...    67   2e-09
emb|CBI29817.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002278623.1| PREDICTED: 60S ribosomal export protein NMD3...    62   4e-08
ref|XP_001768176.1| predicted protein [Physcomitrella patens sub...    61   8e-08

>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 7/45 (15%)
 Frame = +1

Query: 1   WTEPHSKRIKVKLNVVK-------LEQAYIAEYVVTDHICESCSR 114
           WTEPHSKRIKVKL V K       LEQ+Y+AEYVV DH+CESCSR
Sbjct: 103 WTEPHSKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCESCSR 147


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 7/45 (15%)
 Frame = +1

Query: 1   WTEPHSKRIKVKLNVVK-------LEQAYIAEYVVTDHICESCSR 114
           WTEPHSKRIKVKL V K       LEQ+Y+AEYVV DH+CESCSR
Sbjct: 103 WTEPHSKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCESCSR 147


>emb|CBI29817.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
 Frame = +1

Query: 1   WTEPHSKRIKVKLNVVK-------LEQAYIAEYVVTDHICESCSR 114
           WTEPHSKRIKVKL V K       LEQAYI EYV  +H+CESCSR
Sbjct: 135 WTEPHSKRIKVKLRVQKEVLNGAILEQAYIVEYVQQEHMCESCSR 179


>ref|XP_002278623.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 489

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 7/45 (15%)
 Frame = +1

Query: 1   WTEPHSKRIKVKLNVVK-------LEQAYIAEYVVTDHICESCSR 114
           WTEPHSKRIKVKL V K       LEQAYI EYV  +H+CESCSR
Sbjct: 103 WTEPHSKRIKVKLRVQKEVLNGAILEQAYIVEYVQQEHMCESCSR 147


>ref|XP_001768176.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680614|gb|EDQ67049.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 516

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
 Frame = +1

Query: 1   WTEPHSKRIKVKLNVVK-------LEQAYIAEYVVTDHICESCSREA 120
           WTEPHSKR+KV+L + K       LEQAY+ EY V DH+CE CSR A
Sbjct: 97  WTEPHSKRLKVRLKIQKEVINGAILEQAYVVEYTVEDHMCEKCSRVA 143