BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001087
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   681   0.0  
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   680   0.0  
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   659   0.0  
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   657   0.0  
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   649   0.0  

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  681 bits (1757), Expect = 0.0
 Identities = 322/417 (77%), Positives = 367/417 (88%)
 Frame = +1

Query: 67   MDEDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPEC 246
            M E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC
Sbjct: 1    MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60

Query: 247  NKFLQPPRTWIRAELESKELLTFCIKRLKNLSKVRLVNAEFVWTEPHSKRIKVKLNVQKE 426
            + +LQPP+TWI+A+LESKELLTFC+KRLKNL+KVRL++AEF+WTEPHSKRIKVKL VQKE
Sbjct: 61   DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 120

Query: 427  VLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILK 606
            VLNG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+
Sbjct: 121  VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 180

Query: 607  HDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNY 786
            HDAA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNY
Sbjct: 181  HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 240

Query: 787  KHTFSVEICPVCREDLVCLPAKVAVGLGNLGPLVLCAKVTNNIFLVDPFTLRHAFLDADQ 966
            K+TFSVEICP+CREDL+CLP KVAV LGNLGPLV+C KV+NNI L+DPFTLRH FLDADQ
Sbjct: 241  KYTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQ 300

Query: 967  YWRLPFRSLLSCKQLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIR 1146
            YWR  F++LLS +QLVEYIVLD             KYALAD QVARVSDFGKND IFNIR
Sbjct: 301  YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 360

Query: 1147 THLGHLLNPGDYALGYDLYVANHNDFELDKYKNLVLPDAILIKKSYEEKRLKKRGKP 1317
            THLGHLLNPGD+ALGYD+Y AN ND EL+KY+  VLP+AILIKKSYEEKR +KRGKP
Sbjct: 361  THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKP 417


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  680 bits (1754), Expect = 0.0
 Identities = 321/417 (76%), Positives = 367/417 (88%)
 Frame = +1

Query: 67   MDEDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPEC 246
            M E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC
Sbjct: 1    MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60

Query: 247  NKFLQPPRTWIRAELESKELLTFCIKRLKNLSKVRLVNAEFVWTEPHSKRIKVKLNVQKE 426
            + +LQPP+TWI+A+LESKELLTFC+KRLKNL+KVRL++AEF+WTEPHSKRIKVKL VQKE
Sbjct: 61   DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKE 120

Query: 427  VLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILK 606
            VLNG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+
Sbjct: 121  VLNGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILR 180

Query: 607  HDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNY 786
            HDAA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNY
Sbjct: 181  HDAAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNY 240

Query: 787  KHTFSVEICPVCREDLVCLPAKVAVGLGNLGPLVLCAKVTNNIFLVDPFTLRHAFLDADQ 966
            K+TFSVEICP+CREDL+CLP KVAV LGNLGP+V+C KV+NNI L+DPFTLRH FLDADQ
Sbjct: 241  KYTFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQ 300

Query: 967  YWRLPFRSLLSCKQLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIR 1146
            YWR  F++LLS +QLVEYIVLD             KYALAD QVARVSDFGKND IFNIR
Sbjct: 301  YWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIR 360

Query: 1147 THLGHLLNPGDYALGYDLYVANHNDFELDKYKNLVLPDAILIKKSYEEKRLKKRGKP 1317
            THLGHLLNPGD+ALGYD+Y AN ND EL+KY+  VLP+AILIKKSYEEKR +KRGKP
Sbjct: 361  THLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKP 417


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  659 bits (1700), Expect = 0.0
 Identities = 316/417 (75%), Positives = 359/417 (86%)
 Frame = +1

Query: 67   MDEDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPEC 246
            M  ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C
Sbjct: 1    MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 247  NKFLQPPRTWIRAELESKELLTFCIKRLKNLSKVRLVNAEFVWTEPHSKRIKVKLNVQKE 426
              +LQPPRTWI+A+LESKELLTFCIKRL+NL+KV+LV+AEFVWTEPHSKRIKVKL VQKE
Sbjct: 61   ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 427  VLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILK 606
            VL G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILK
Sbjct: 121  VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 607  HDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNY 786
            H AA  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+
Sbjct: 181  HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 787  KHTFSVEICPVCREDLVCLPAKVAVGLGNLGPLVLCAKVTNNIFLVDPFTLRHAFLDADQ 966
            KHTFSVEI P+CREDL+CLP KVAV LGNLGPLV+C KVTN I L+DPFTLRH FLDADQ
Sbjct: 241  KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 967  YWRLPFRSLLSCKQLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIR 1146
            YWR  FRSLL+ +QLVEY+VLD             KY LA  QVARVSDFG+ND +F+I+
Sbjct: 301  YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 1147 THLGHLLNPGDYALGYDLYVANHNDFELDKYKNLVLPDAILIKKSYEEKRLKKRGKP 1317
            THLGH+LNPGDYALGYDLY AN ND EL+KYK L LP+AILIKKSYEEKR +KRGKP
Sbjct: 361  THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKP 417


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  657 bits (1695), Expect = 0.0
 Identities = 315/417 (75%), Positives = 358/417 (85%)
 Frame = +1

Query: 67   MDEDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPEC 246
            M  ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C
Sbjct: 1    MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 247  NKFLQPPRTWIRAELESKELLTFCIKRLKNLSKVRLVNAEFVWTEPHSKRIKVKLNVQKE 426
              +LQPPRTWI+A+LESKELLTFCIKRL+NL+KV+LV+AEFVWTEPHSKRIKVKL VQKE
Sbjct: 61   ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 427  VLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILK 606
            VL G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILK
Sbjct: 121  VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 607  HDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNY 786
            H AA  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+
Sbjct: 181  HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 787  KHTFSVEICPVCREDLVCLPAKVAVGLGNLGPLVLCAKVTNNIFLVDPFTLRHAFLDADQ 966
            KHTFSVEI P+CREDL+CLP KVAV LGNLGPLV+C KVTN I L+DPFTLRH FLDADQ
Sbjct: 241  KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 967  YWRLPFRSLLSCKQLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNIR 1146
            YWR  FRSLL+ +QLVEY+VLD             KY LA  QVARVSDFG+ND +F+I+
Sbjct: 301  YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 1147 THLGHLLNPGDYALGYDLYVANHNDFELDKYKNLVLPDAILIKKSYEEKRLKKRGKP 1317
            THLGH+LNPGDYALGYDLY AN ND EL+KYK L LP+AILIKKSYEEKR +K GKP
Sbjct: 361  THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKP 417


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  649 bits (1673), Expect = 0.0
 Identities = 309/418 (73%), Positives = 360/418 (86%), Gaps = 1/418 (0%)
 Frame = +1

Query: 67   MDEDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPEC 246
            M E++GMF V QTIGSVLCCKCGI M PNAANMCV+CLRSEVDITEGL+K++I++ CPEC
Sbjct: 1    MAEEAGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVILLHCPEC 60

Query: 247  NKFLQPPRTWIRAELESKELLTFCIKRLKNLSK-VRLVNAEFVWTEPHSKRIKVKLNVQK 423
            + +L PP T IRA+LES+EL+ FC+K+LK  S  V LVNAEF+WTEPHSKRIK+++ VQK
Sbjct: 61   DTYLDPPSTRIRAQLESRELMAFCLKKLKLKSTGVILVNAEFIWTEPHSKRIKLRVRVQK 120

Query: 424  EVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLIL 603
            EVL+G  LEQAY+ EYV  D MC+SC+RVQANPDQWVA VQLRQHV+HRR+FFYLEQLIL
Sbjct: 121  EVLHGAILEQAYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLIL 180

Query: 604  KHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYN 783
            KHDAA RAIKIKQMD GIDFFF++RSH +KF++FVGKV P+KSR DKQLVSHDTKSN+YN
Sbjct: 181  KHDAAARAIKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYN 240

Query: 784  YKHTFSVEICPVCREDLVCLPAKVAVGLGNLGPLVLCAKVTNNIFLVDPFTLRHAFLDAD 963
            YKHTFSVEI P+CREDLVCLP +VAV LGNLGPLV+C+KVTN+I L+DPFTLRH FLDAD
Sbjct: 241  YKHTFSVEISPICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDAD 300

Query: 964  QYWRLPFRSLLSCKQLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKNDKIFNI 1143
            QYWR PF+SLL+ +QLVEYIV D             +YALAD  VAR+SDFGKND +FNI
Sbjct: 301  QYWRTPFKSLLTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNI 360

Query: 1144 RTHLGHLLNPGDYALGYDLYVANHNDFELDKYKNLVLPDAILIKKSYEEKRLKKRGKP 1317
            +THLGH+L PGDYALGYDL+ AN ND ELDKYKNLV+P+AIL+KKSYEEKR +KRGKP
Sbjct: 361  KTHLGHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKP 418