BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001084
         (1596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-61
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   239   2e-60
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   239   2e-60
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           239   2e-60
ref|XP_002318257.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-58

>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  242 bits (618), Expect = 2e-61
 Identities = 129/222 (58%), Positives = 151/222 (68%), Gaps = 7/222 (3%)
 Frame = +2

Query: 812  TGFAFVYMDDERDAEDAIRGLDRAEFGRQGRRLRVEWTKQEXXXXXXXXXXXXXXXX-PT 988
            +GFAF+YM+DERDAEDAIRGLDR EFGR+GRRLRVEWTKQE                 P+
Sbjct: 35   SGFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPS 94

Query: 989  KTLFVINFDPIHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKL 1168
            KTLFVINFDP HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E+QEDATKALDATN+SKL
Sbjct: 95   KTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKL 154

Query: 1169 MDQVVSVEYAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPHRRQRDSPDYGHG--- 1339
            +D+V+SVEYAV                              PSP+RR+R SPDYG G   
Sbjct: 155  LDRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDYGRGPSP 214

Query: 1340 LGSERGR---DRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA 1456
               ERG     R RSPSP+R DR SPDYGRG S +   R RA
Sbjct: 215  YRKERGSPDYGRRRSPSPYRRDRASPDYGRGTSRSPYRRERA 256


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
            vinifera]
          Length = 480

 Score =  239 bits (609), Expect = 2e-60
 Identities = 129/216 (59%), Positives = 144/216 (66%), Gaps = 1/216 (0%)
 Frame = +2

Query: 812  TGFAFVYMDDERDAEDAIRGLDRAEFGRQGRRLRVEWTKQEXXXXXXXXXXXXXXXX-PT 988
            TGFAF+YM+DERDAEDAIRGLDR  FGR+GRRLRVEWTKQE                 P 
Sbjct: 37   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 96

Query: 989  KTLFVINFDPIHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKL 1168
            KTLFVINFDP +TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKL
Sbjct: 97   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 156

Query: 1169 MDQVVSVEYAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPHRRQRDSPDYGHGLGS 1348
            MD+V+SVEYAV                               SP+RR+R SPDYG G   
Sbjct: 157  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 213

Query: 1349 ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA 1456
                    SPS +R +R SPDYGR PSP+ + R RA
Sbjct: 214  -------SSPSAYRRERASPDYGRDPSPSPRRRDRA 242


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  239 bits (609), Expect = 2e-60
 Identities = 129/216 (59%), Positives = 144/216 (66%), Gaps = 1/216 (0%)
 Frame = +2

Query: 812  TGFAFVYMDDERDAEDAIRGLDRAEFGRQGRRLRVEWTKQEXXXXXXXXXXXXXXXX-PT 988
            TGFAF+YM+DERDAEDAIRGLDR  FGR+GRRLRVEWTKQE                 P 
Sbjct: 35   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 94

Query: 989  KTLFVINFDPIHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKL 1168
            KTLFVINFDP +TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKL
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 1169 MDQVVSVEYAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPHRRQRDSPDYGHGLGS 1348
            MD+V+SVEYAV                               SP+RR+R SPDYG G   
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 211

Query: 1349 ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA 1456
                    SPS +R +R SPDYGR PSP+ + R RA
Sbjct: 212  -------SSPSAYRRERASPDYGRDPSPSPRRRDRA 240


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  239 bits (609), Expect = 2e-60
 Identities = 129/216 (59%), Positives = 144/216 (66%), Gaps = 1/216 (0%)
 Frame = +2

Query: 812  TGFAFVYMDDERDAEDAIRGLDRAEFGRQGRRLRVEWTKQEXXXXXXXXXXXXXXXX-PT 988
            TGFAF+YM+DERDAEDAIRGLDR  FGR+GRRLRVEWTKQE                 P 
Sbjct: 35   TGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPA 94

Query: 989  KTLFVINFDPIHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKL 1168
            KTLFVINFDP +TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKL
Sbjct: 95   KTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKL 154

Query: 1169 MDQVVSVEYAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPHRRQRDSPDYGHGLGS 1348
            MD+V+SVEYAV                               SP+RR+R SPDYG G   
Sbjct: 155  MDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRG--- 211

Query: 1349 ERGRDRARSPSPHRGDRYSPDYGRGPSPNGKPRSRA 1456
                    SPS +R +R SPDYGR PSP+ + R RA
Sbjct: 212  -------SSPSAYRRERASPDYGRDPSPSPRRRDRA 240


>ref|XP_002318257.1| predicted protein [Populus trichocarpa] gi|222858930|gb|EEE96477.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  233 bits (593), Expect = 1e-58
 Identities = 133/266 (50%), Positives = 158/266 (59%), Gaps = 8/266 (3%)
 Frame = +2

Query: 815  GFAFVYMDDERDAEDAIRGLDRAEFGRQGRRLRVEWTKQEXXXXXXXXXXXXXXXX-PTK 991
            GFAF+YM+DERDAEDAIRGLDR EFGR+GRRL VEWTKQE                 P+K
Sbjct: 36   GFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLHVEWTKQERGARQPGGSSRKSANTRPSK 95

Query: 992  TLFVINFDPIHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDATKALDATNMSKLM 1171
            TLFVINFDP HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E+QEDATKALDATNMSKL+
Sbjct: 96   TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNMSKLL 155

Query: 1172 DQVVSVEYAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPHRRQRDSPDYGHGLGSE 1351
             +V+SVEYA                               PSP+RR+R S DYGHG    
Sbjct: 156  YRVISVEYAARDDGERKDGHSPDRSRDRSPDRRGHDRRRSPSPYRRERGSTDYGHGPSPY 215

Query: 1352 RGRDRA-------RSPSPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXXXXXXXXXXXA 1510
            R ++R        RSPSP+R DR SPDYGRG + +   R RA                  
Sbjct: 216  R-KERVSPDSGCRRSPSPYRRDRASPDYGRGSTRSPSRRERA-------------GSDHG 261

Query: 1511 KPEMRGRTYRRDSPNVVGGLSPDIKP 1588
                RG  YR+D  + V G  P   P
Sbjct: 262  HGPSRG-PYRKDKASPVNGNGPSDSP 286