BLASTX nr result

ID: Coptis23_contig00001078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00001078
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241...   202   2e-49
ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|2...   195   2e-47
ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-45
ref|XP_002513547.1| conserved hypothetical protein [Ricinus comm...   184   4e-44
gb|EAY99274.1| hypothetical protein OsI_21238 [Oryza sativa Indi...   181   5e-43

>ref|XP_002268568.1| PREDICTED: uncharacterized protein LOC100241849 [Vitis vinifera]
           gi|302144033|emb|CBI23138.3| unnamed protein product
           [Vitis vinifera]
          Length = 292

 Score =  202 bits (514), Expect = 2e-49
 Identities = 111/223 (49%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
 Frame = +2

Query: 137 VEREREKVRMYAETGLLYPYXXXXXXXXXXXXXLCGIQKXXXXXXXXXXXXXXLEYDLGA 316
           VER  E   MYAE GLLYPY              C  QK              +EYDLGA
Sbjct: 3   VERGGE---MYAEAGLLYPYFQCFSQELQQLEEFCFSQKTNASMSHLAQMSTIMEYDLGA 59

Query: 317 EGDLFKAPEPIIEEPDVVFDPVASAISMISCGEGVMSPETMESGEIGSMQNESLLSEVFY 496
           EGDLFKAPEPIIEEP +  DP+ +A+SMI CGE V+SP+ ++  +I S+Q+E LLSEVFY
Sbjct: 60  EGDLFKAPEPIIEEPVMGLDPMTAAMSMIPCGEDVISPQGLKVSDIESIQSEQLLSEVFY 119

Query: 497 ECKKDLLANSAMKESFNEA-EITLPALQMEEALNPEKFSFVSQRSVYKSVSSGCLPSMEW 673
           ECKKDLLA + ++   +E  +I +P  +M E    E+   + +    KSVSSGCL SMEW
Sbjct: 120 ECKKDLLAKTVIESPLSEVLDIKIPVARMGETQAAEE-KALYEGLFQKSVSSGCLSSMEW 178

Query: 674 IPASAARPNFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNL 802
           +  +A RPNFLDF G+DF   YGMRRA+S+GD++TL  G  +L
Sbjct: 179 VNGTAMRPNFLDFPGMDFGAAYGMRRAFSDGDIKTLGNGQMSL 221



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +3

Query: 951  RNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 1061
            RNFGR IKYACRKALADSQPR+RGRFAKTEE +  K+
Sbjct: 255  RNFGRKIKYACRKALADSQPRIRGRFAKTEELDMTKR 291


>ref|XP_002318413.1| predicted protein [Populus trichocarpa] gi|222859086|gb|EEE96633.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  195 bits (496), Expect = 2e-47
 Identities = 107/215 (49%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
 Frame = +2

Query: 164 MYAETGLLYPYXXXXXXXXXXXXXLCGIQKXXXXXXXXXXXXXXLEYDLGAEGDLFKAPE 343
           MY E+GLL+PY              C  QK               EYDLG EGDLFKAP+
Sbjct: 1   MYEESGLLFPYMQNFFQDIQQLEEYCKYQKTNVPMTTIS------EYDLGGEGDLFKAPK 54

Query: 344 PIIEEPDVVFDPVASAISMISCGEGVMSPETMESGEIGSMQNESLLSEVFYECKKDLLAN 523
           PIIEEP V  DP+ASAISMISCGE V++ + ++  +I S+QNE LL+EVFYECKKDLL  
Sbjct: 55  PIIEEPLVGIDPMASAISMISCGEEVITSQGLKVTDIESIQNEQLLNEVFYECKKDLLEK 114

Query: 524 SAM-KESFNE-AEITLPALQMEEALNPEKFSFVSQRSVYKSVSSGCLPSMEWIPASAARP 697
            AM  +S  E  +I LP ++ ++    ++       ++ KSVSSGCL S+EW+  +A +P
Sbjct: 115 EAMDTQSLAELLDIKLPVVRTDDENPIKENKLPPDAALSKSVSSGCLSSIEWVHGAAVKP 174

Query: 698 NFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNL 802
           +FLDF G+DFE  YGMRRA+SEGD++TL  GNT+L
Sbjct: 175 SFLDFPGIDFENAYGMRRAFSEGDIKTLGNGNTSL 209



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +3

Query: 951  RNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 1061
            RNFGR IKYACRKALADSQPR+RGRFAKTEE +  K+
Sbjct: 242  RNFGRKIKYACRKALADSQPRIRGRFAKTEEWDVSKR 278


>ref|XP_002321415.1| predicted protein [Populus trichocarpa] gi|222868411|gb|EEF05542.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  189 bits (479), Expect = 2e-45
 Identities = 97/170 (57%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
 Frame = +2

Query: 299 EYDLGAEGDLFKAPEPIIEEPDVVFDPVASAISMISCGEGVMSPETMESGEIGSMQNESL 478
           EYDLG EGDLFKAPEPIIEEP VV DP+ +AISMISCGE V+S + +++ +I S QNE L
Sbjct: 76  EYDLGGEGDLFKAPEPIIEEPLVVIDPMTAAISMISCGEEVISSQGLKAADIESFQNEQL 135

Query: 479 LSEVFYECKKDLLANSAMK-ESFNE-AEITLPALQMEEALNPEKFSFVSQRSVYKSVSSG 652
           L+EVFYECKKD+L   AM+  S  E  +I +P ++ +E  N ++   +   ++ KSVSSG
Sbjct: 136 LNEVFYECKKDILEKEAMETPSLAELLDIKIPIVRTDEN-NIQENKLLPDAALLKSVSSG 194

Query: 653 CLPSMEWIPASAARPNFLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNL 802
           CL S+EW+  +A +P+FLDF G+DFE  YGMRRAYSEGD++TL  GN +L
Sbjct: 195 CLRSVEWLHGAAVKPSFLDFPGIDFENAYGMRRAYSEGDIKTLGNGNPSL 244



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +3

Query: 951  RNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 1061
            RNFGR IKYACRKALADSQPR+RGRFAKTEE +  K+
Sbjct: 277  RNFGRKIKYACRKALADSQPRIRGRFAKTEECDVSKR 313


>ref|XP_002513547.1| conserved hypothetical protein [Ricinus communis]
           gi|223547455|gb|EEF48950.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  184 bits (467), Expect = 4e-44
 Identities = 100/214 (46%), Positives = 135/214 (63%), Gaps = 1/214 (0%)
 Frame = +2

Query: 164 MYAETGLLYPYXXXXXXXXXXXXXLCGIQKXXXXXXXXXXXXXXLEYDLGAEGDLFKAPE 343
           MYA++GLL+PY                 QK               EYDLG EGDLFKAPE
Sbjct: 1   MYADSGLLFPYLQNFSPDIQQLEEYYNYQKTNALMSNMIPTSTISEYDLGGEGDLFKAPE 60

Query: 344 PIIEEPDVVFDPVASAISMISCGEGVMSPETMESGEIGSMQNESLLSEVFYECKKDLLAN 523
           PIIEEP +  DP+ +AISMISCGE V+S + +++ +I S+Q E LLSEVFYECKKDL+  
Sbjct: 61  PIIEEPLIGLDPMTAAISMISCGEEVISSQGLKAADIESIQTEPLLSEVFYECKKDLMEK 120

Query: 524 SAMKESFNE-AEITLPALQMEEALNPEKFSFVSQRSVYKSVSSGCLPSMEWIPASAARPN 700
           + ++   +E  +I +P ++  E    +  ++ S   + KSVSSGCL S+EW+  +A +PN
Sbjct: 121 ANIEIPVSEILDIKIPVVRTVEN-QIQGNNYFSDAQLPKSVSSGCLSSLEWVHGAAVKPN 179

Query: 701 FLDFQGVDFETVYGMRRAYSEGDMQTLSPGNTNL 802
           FL+F G+D    YGMRRAYSEGD++TL  GN N+
Sbjct: 180 FLEFSGMDLGAAYGMRRAYSEGDIKTL--GNENM 211



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 951  RNFGRTIKYACRKALADSQPRVRGRFAKTEESETLKK 1061
            RNFGR IKYACRKALADSQPRVRGRFAKTE+S+  ++
Sbjct: 246  RNFGRKIKYACRKALADSQPRVRGRFAKTEDSDVYRR 282


>gb|EAY99274.1| hypothetical protein OsI_21238 [Oryza sativa Indica Group]
           gi|222632787|gb|EEE64919.1| hypothetical protein
           OsJ_19779 [Oryza sativa Japonica Group]
          Length = 304

 Score =  181 bits (458), Expect = 5e-43
 Identities = 102/182 (56%), Positives = 128/182 (70%), Gaps = 16/182 (8%)
 Frame = +2

Query: 299 EYDLGAEGDLFKAPEPIIEEPDVVFDPVASAISMISCGEGVMSPETMESGEIGSMQNESL 478
           EYDLG EGDLFKAPEPIIEEP +  DPVA+AISM+S  E VM  ET+E  +I  +QN+SL
Sbjct: 51  EYDLGGEGDLFKAPEPIIEEPVLSLDPVAAAISMMSGSENVMD-ETIEVADISDIQNDSL 109

Query: 479 LSEVFYECKKDLLANSAMKESFNE-AEITLPALQMEE----------ALNPEKFSFVSQR 625
           LSEV YEC+K+L+  SA++E+ +E  ++ +P LQ+EE          A+  EK S     
Sbjct: 110 LSEVLYECEKELMEKSAIEETISELLDVKIPMLQVEEFPRETQVQLPAMEKEKPSVPECC 169

Query: 626 SVYKSVSSGCLPSMEWIPASAARPNFLDFQGVDFETVYGMRRAYSEGDMQTLS-----PG 790
           S+ KSVSSGCL S +WI    ARPNFLDFQG+DFET +G+RRAYSEGD+Q L      PG
Sbjct: 170 SLQKSVSSGCLNSADWI-NGPARPNFLDFQGLDFETAFGLRRAYSEGDIQNLGASTPRPG 228

Query: 791 NT 796
           N+
Sbjct: 229 NS 230



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = +3

Query: 951  RNFGRTIKYACRKALADSQPRVRGRFAKTEESETLK 1058
            RNFGR IKYACRKALADSQPRVRGRFAK EE + LK
Sbjct: 266  RNFGRKIKYACRKALADSQPRVRGRFAKIEEGDLLK 301


Top